EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSORLG00020003401 (Gene tree)
Gene ID
-
Gene Symbol
si:ch211-117c9.1
Alias
-
Full Name
si:ch211-117c9.1
Gene Type
protein_coding
Species
Oryzias_latipes_hni
Status
putative
Strand
Plus strand
Length
11765 bases
Position
chr7:14431030-14442794
Accession
ZDB-GENE-110411-282
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSORLP00020002641RIO1PF01163.220.0001211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSORLT00020010967-3782-ENSORLP00020002641649 (aa)--
Gene Model
Click here to download ENSORLG00020003401's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020003401's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSORLG00020003401si:ch211-117c9.19245.499ENSORLG00020008332nuak28646.166
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSORLG00020003401si:ch211-117c9.19048.229ENSG00000163545NUAK27747.700Homo_sapiens
ENSORLG00020003401si:ch211-117c9.19246.982ENSAPOG00000000485nuak28546.982Acanthochromis_polyacanthus
ENSORLG00020003401si:ch211-117c9.19048.630ENSAMEG00000001435NUAK27948.630Ailuropoda_melanoleuca
ENSORLG00020003401si:ch211-117c9.18671.000ENSACIG00000017871-9271.000Amphilophus_citrinellus
ENSORLG00020003401si:ch211-117c9.19247.947ENSACIG00000019490nuak28447.627Amphilophus_citrinellus
ENSORLG00020003401si:ch211-117c9.19048.305ENSAOCG00000022359nuak28148.305Amphiprion_ocellaris
ENSORLG00020003401si:ch211-117c9.19147.386ENSAPEG00000014640nuak28547.386Amphiprion_percula
ENSORLG00020003401si:ch211-117c9.110073.002ENSATEG00000003834si:ch211-117c9.19673.002Anabas_testudineus
ENSORLG00020003401si:ch211-117c9.19146.205ENSATEG00000006373nuak28446.205Anabas_testudineus
ENSORLG00020003401si:ch211-117c9.19047.739ENSACAG00000014491NUAK28847.508Anolis_carolinensis
ENSORLG00020003401si:ch211-117c9.19048.034ENSANAG00000023561NUAK28348.034Aotus_nancymaae
ENSORLG00020003401si:ch211-117c9.19047.029ENSACLG00000022385nuak28451.304Astatotilapia_calliptera
ENSORLG00020003401si:ch211-117c9.110071.534ENSACLG00000009680si:ch211-117c9.19571.450Astatotilapia_calliptera
ENSORLG00020003401si:ch211-117c9.19343.689ENSAMXG00000036486nuak28843.274Astyanax_mexicanus
ENSORLG00020003401si:ch211-117c9.19048.294ENSCJAG00000040262NUAK28348.034Callithrix_jacchus
ENSORLG00020003401si:ch211-117c9.19048.041ENSCAFG00000010038NUAK27747.279Canis_familiaris
ENSORLG00020003401si:ch211-117c9.19048.211ENSCAFG00020005323NUAK28247.700Canis_lupus_dingo
ENSORLG00020003401si:ch211-117c9.19049.073ENSCHIG00000013817NUAK28347.199Capra_hircus
ENSORLG00020003401si:ch211-117c9.19049.233ENSTSYG00000033748NUAK27748.722Carlito_syrichta
ENSORLG00020003401si:ch211-117c9.17969.091ENSCPOG00000011773NUAK27566.901Cavia_porcellus
ENSORLG00020003401si:ch211-117c9.19048.034ENSCCAG00000019631NUAK28347.863Cebus_capucinus
ENSORLG00020003401si:ch211-117c9.19047.723ENSCATG00000044068NUAK27747.179Cercocebus_atys
ENSORLG00020003401si:ch211-117c9.19047.579ENSCLAG00000012570NUAK28247.324Chinchilla_lanigera
ENSORLG00020003401si:ch211-117c9.19048.229ENSCSAG00000014618NUAK27747.700Chlorocebus_sabaeus
ENSORLG00020003401si:ch211-117c9.19046.610ENSCPBG00000001503NUAK28446.441Chrysemys_picta_bellii
ENSORLG00020003401si:ch211-117c9.19048.382ENSCANG00000038643NUAK27747.692Colobus_angolensis_palliatus
ENSORLG00020003401si:ch211-117c9.19146.167ENSCSEG00000002218nuak28546.167Cynoglossus_semilaevis
ENSORLG00020003401si:ch211-117c9.110068.630ENSCVAG00000015427si:ch211-117c9.19568.538Cyprinodon_variegatus
ENSORLG00020003401si:ch211-117c9.19046.633ENSCVAG00000023192nuak28346.180Cyprinodon_variegatus
ENSORLG00020003401si:ch211-117c9.19344.942ENSDARG00000063661nuak28544.959Danio_rerio
ENSORLG00020003401si:ch211-117c9.19047.521ENSDNOG00000031509NUAK28047.350Dasypus_novemcinctus
ENSORLG00020003401si:ch211-117c9.19047.723ENSDORG00000013111Nuak28348.148Dipodomys_ordii
ENSORLG00020003401si:ch211-117c9.19048.142ENSEASG00005005777NUAK28248.205Equus_asinus_asinus
ENSORLG00020003401si:ch211-117c9.19047.804ENSECAG00000014699NUAK28247.692Equus_caballus
ENSORLG00020003401si:ch211-117c9.19048.904ENSEEUG00000011132NUAK28248.735Erinaceus_europaeus
ENSORLG00020003401si:ch211-117c9.110059.012ENSELUG00000002633si:ch211-117c9.19458.746Esox_lucius
ENSORLG00020003401si:ch211-117c9.19046.218ENSELUG00000014173nuak27945.882Esox_lucius
ENSORLG00020003401si:ch211-117c9.19048.990ENSFCAG00000043568NUAK28048.552Felis_catus
ENSORLG00020003401si:ch211-117c9.18048.375ENSFALG00000000621NUAK29348.184Ficedula_albicollis
ENSORLG00020003401si:ch211-117c9.110069.276ENSFHEG00000018818-9569.037Fundulus_heteroclitus
ENSORLG00020003401si:ch211-117c9.19047.049ENSGMOG00000008068nuak28646.891Gadus_morhua
ENSORLG00020003401si:ch211-117c9.19046.678ENSGALG00000036616NUAK28447.019Gallus_gallus
ENSORLG00020003401si:ch211-117c9.19045.946ENSGAFG00000021595nuak28246.284Gambusia_affinis
ENSORLG00020003401si:ch211-117c9.110070.659ENSGAFG00000006164si:ch211-117c9.19670.420Gambusia_affinis
ENSORLG00020003401si:ch211-117c9.19046.939ENSGACG00000001061nuak28646.859Gasterosteus_aculeatus
ENSORLG00020003401si:ch211-117c9.19046.587ENSGAGG00000011826NUAK28446.416Gopherus_agassizii
ENSORLG00020003401si:ch211-117c9.19048.229ENSGGOG00000003525NUAK27747.700Gorilla_gorilla
ENSORLG00020003401si:ch211-117c9.19047.199ENSHBUG00000002854nuak28347.959Haplochromis_burtoni
ENSORLG00020003401si:ch211-117c9.19047.611ENSHGLG00000018780NUAK28247.700Heterocephalus_glaber_female
ENSORLG00020003401si:ch211-117c9.19047.440ENSHGLG00100004449NUAK28247.530Heterocephalus_glaber_male
ENSORLG00020003401si:ch211-117c9.18081.395ENSHCOG00000001701si:ch211-117c9.19064.667Hippocampus_comes
ENSORLG00020003401si:ch211-117c9.19243.457ENSIPUG00000017552nuak28743.689Ictalurus_punctatus
ENSORLG00020003401si:ch211-117c9.19045.983ENSSTOG00000026121NUAK28247.009Ictidomys_tridecemlineatus
ENSORLG00020003401si:ch211-117c9.19048.311ENSJJAG00000022561Nuak28247.782Jaculus_jaculus
ENSORLG00020003401si:ch211-117c9.19246.546ENSKMAG00000021452nuak28646.293Kryptolebias_marmoratus
ENSORLG00020003401si:ch211-117c9.19047.395ENSLBEG00000013643nuak28148.294Labrus_bergylta
ENSORLG00020003401si:ch211-117c9.19047.189ENSLACG00000009120NUAK28247.019Latimeria_chalumnae
ENSORLG00020003401si:ch211-117c9.19047.723ENSMFAG00000038432NUAK27747.179Macaca_fascicularis
ENSORLG00020003401si:ch211-117c9.19047.723ENSMMUG00000018584NUAK27747.179Macaca_mulatta
ENSORLG00020003401si:ch211-117c9.19048.061ENSMNEG00000035837NUAK27747.521Macaca_nemestrina
ENSORLG00020003401si:ch211-117c9.19048.061ENSMLEG00000040864NUAK27747.521Mandrillus_leucophaeus
ENSORLG00020003401si:ch211-117c9.110067.414ENSMAMG00000010172si:ch211-117c9.19667.862Mastacembelus_armatus
ENSORLG00020003401si:ch211-117c9.19246.458ENSMAMG00000023908nuak28546.543Mastacembelus_armatus
ENSORLG00020003401si:ch211-117c9.19867.835ENSMZEG00005027060si:ch211-117c9.19567.683Maylandia_zebra
ENSORLG00020003401si:ch211-117c9.19047.029ENSMZEG00005011074nuak28251.304Maylandia_zebra
ENSORLG00020003401si:ch211-117c9.17449.278ENSMGAG00000002936NUAK29149.072Meleagris_gallopavo
ENSORLG00020003401si:ch211-117c9.19049.153ENSMAUG00000017535Nuak28348.061Mesocricetus_auratus
ENSORLG00020003401si:ch211-117c9.19048.294ENSMICG00000000056NUAK28248.123Microcebus_murinus
ENSORLG00020003401si:ch211-117c9.19048.229ENSMOCG00000020262Nuak28547.804Microtus_ochrogaster
ENSORLG00020003401si:ch211-117c9.110068.161ENSMALG00000010356si:ch211-117c9.19668.012Monopterus_albus
ENSORLG00020003401si:ch211-117c9.19046.010ENSMALG00000018179nuak28245.918Monopterus_albus
ENSORLG00020003401si:ch211-117c9.19048.464MGP_CAROLIEiJ_G0014585Nuak28347.863Mus_caroli
ENSORLG00020003401si:ch211-117c9.19048.464ENSMUSG00000009772Nuak28347.863Mus_musculus
ENSORLG00020003401si:ch211-117c9.19048.805MGP_PahariEiJ_G0027821Nuak28348.205Mus_pahari
ENSORLG00020003401si:ch211-117c9.19048.464MGP_SPRETEiJ_G0015392Nuak28848.034Mus_spretus
ENSORLG00020003401si:ch211-117c9.19048.294ENSMLUG00000011425NUAK27848.123Myotis_lucifugus
ENSORLG00020003401si:ch211-117c9.19766.358ENSNBRG00000020753si:ch211-117c9.19465.586Neolamprologus_brichardi
ENSORLG00020003401si:ch211-117c9.16950.870ENSNBRG00000006567nuak27850.870Neolamprologus_brichardi
ENSORLG00020003401si:ch211-117c9.19048.123ENSNLEG00000014473NUAK27747.782Nomascus_leucogenys
ENSORLG00020003401si:ch211-117c9.19048.299ENSODEG00000006060NUAK28248.041Octodon_degus
ENSORLG00020003401si:ch211-117c9.19047.708ENSONIG00000018929nuak28647.708Oreochromis_niloticus
ENSORLG00020003401si:ch211-117c9.19071.959ENSONIG00000012465si:ch211-117c9.19972.203Oreochromis_niloticus
ENSORLG00020003401si:ch211-117c9.16156.391ENSOCUG00000002318NUAK27955.779Oryctolagus_cuniculus
ENSORLG00020003401si:ch211-117c9.19245.499ENSORLG00000000229nuak28646.166Oryzias_latipes
ENSORLG00020003401si:ch211-117c9.110098.151ENSORLG00000023101si:ch211-117c9.110098.151Oryzias_latipes
ENSORLG00020003401si:ch211-117c9.19245.089ENSORLG00015000637nuak28646.091Oryzias_latipes_hsok
ENSORLG00020003401si:ch211-117c9.110089.060ENSOMEG00000013190si:ch211-117c9.19689.060Oryzias_melastigma
ENSORLG00020003401si:ch211-117c9.19245.380ENSOMEG00000015088nuak28645.724Oryzias_melastigma
ENSORLG00020003401si:ch211-117c9.19048.294ENSOGAG00000013071NUAK28248.041Otolemur_garnettii
ENSORLG00020003401si:ch211-117c9.19052.361ENSOARG00000003826NUAK27744.898Ovis_aries
ENSORLG00020003401si:ch211-117c9.19048.398ENSPPAG00000032571NUAK27747.952Pan_paniscus
ENSORLG00020003401si:ch211-117c9.19048.822ENSPPRG00000013755NUAK28048.552Panthera_pardus
ENSORLG00020003401si:ch211-117c9.18447.038ENSPTIG00000005428NUAK27446.727Panthera_tigris_altaica
ENSORLG00020003401si:ch211-117c9.19048.398ENSPTRG00000001897NUAK27747.952Pan_troglodytes
ENSORLG00020003401si:ch211-117c9.19048.229ENSPANG00000018147NUAK27747.692Papio_anubis
ENSORLG00020003401si:ch211-117c9.19244.079ENSPKIG00000001753nuak28444.719Paramormyrops_kingsleyae
ENSORLG00020003401si:ch211-117c9.19045.973ENSPSIG00000009103NUAK28746.206Pelodiscus_sinensis
ENSORLG00020003401si:ch211-117c9.19862.946ENSPMGG00000005991si:ch211-117c9.19362.229Periophthalmus_magnuspinnatus
ENSORLG00020003401si:ch211-117c9.19045.315ENSPCIG00000004437NUAK28245.826Phascolarctos_cinereus
ENSORLG00020003401si:ch211-117c9.110069.016ENSPFOG00000009064-9872.402Poecilia_formosa
ENSORLG00020003401si:ch211-117c9.19145.771ENSPFOG00000000376nuak28446.000Poecilia_formosa
ENSORLG00020003401si:ch211-117c9.110069.481ENSPLAG00000010229-9669.481Poecilia_latipinna
ENSORLG00020003401si:ch211-117c9.19146.000ENSPLAG00000013584nuak28446.000Poecilia_latipinna
ENSORLG00020003401si:ch211-117c9.19145.605ENSPMEG00000004656nuak28445.833Poecilia_mexicana
ENSORLG00020003401si:ch211-117c9.110069.630ENSPMEG00000006856si:ch211-117c9.19669.630Poecilia_mexicana
ENSORLG00020003401si:ch211-117c9.19145.667ENSPREG00000004466nuak28445.667Poecilia_reticulata
ENSORLG00020003401si:ch211-117c9.110069.027ENSPREG00000018548si:ch211-117c9.19768.879Poecilia_reticulata
ENSORLG00020003401si:ch211-117c9.19048.061ENSPPYG00000000307NUAK28347.530Pongo_abelii
ENSORLG00020003401si:ch211-117c9.19047.350ENSPCAG00000015229NUAK28347.009Procavia_capensis
ENSORLG00020003401si:ch211-117c9.19048.893ENSPCOG00000023513NUAK27748.722Propithecus_coquereli
ENSORLG00020003401si:ch211-117c9.19047.368ENSPNYG00000007903nuak28247.368Pundamilia_nyererei
ENSORLG00020003401si:ch211-117c9.19244.951ENSPNAG00000001964nuak28245.440Pygocentrus_nattereri
ENSORLG00020003401si:ch211-117c9.19048.048ENSRBIG00000012566NUAK27747.619Rhinopithecus_bieti
ENSORLG00020003401si:ch211-117c9.19048.048ENSRROG00000037807NUAK27747.619Rhinopithecus_roxellana
ENSORLG00020003401si:ch211-117c9.19048.547ENSSBOG00000020563NUAK28348.376Saimiri_boliviensis_boliviensis
ENSORLG00020003401si:ch211-117c9.19045.578ENSSHAG00000014222NUAK27745.826Sarcophilus_harrisii
ENSORLG00020003401si:ch211-117c9.19045.151ENSSFOG00015016369nuak28744.839Scleropages_formosus
ENSORLG00020003401si:ch211-117c9.110071.302ENSSMAG00000008945si:ch211-117c9.19671.302Scophthalmus_maximus
ENSORLG00020003401si:ch211-117c9.110071.387ENSSDUG00000016779si:ch211-117c9.19571.387Seriola_dumerili
ENSORLG00020003401si:ch211-117c9.19346.730ENSSDUG00000009077nuak28547.030Seriola_dumerili
ENSORLG00020003401si:ch211-117c9.110071.640ENSSLDG00000025370-9571.640Seriola_lalandi_dorsalis
ENSORLG00020003401si:ch211-117c9.19346.890ENSSLDG00000022806nuak28547.191Seriola_lalandi_dorsalis
ENSORLG00020003401si:ch211-117c9.19046.246ENSSPUG00000014390NUAK28446.075Sphenodon_punctatus
ENSORLG00020003401si:ch211-117c9.110073.152ENSSPAG00000019755si:ch211-117c9.19573.303Stegastes_partitus
ENSORLG00020003401si:ch211-117c9.19147.776ENSSPAG00000013352nuak28447.776Stegastes_partitus
ENSORLG00020003401si:ch211-117c9.19049.915ENSSSCG00000038471NUAK28749.659Sus_scrofa
ENSORLG00020003401si:ch211-117c9.19444.550ENSTRUG00000023948nuak28545.469Takifugu_rubripes
ENSORLG00020003401si:ch211-117c9.19967.015ENSTRUG00000020777si:ch211-117c9.19467.066Takifugu_rubripes
ENSORLG00020003401si:ch211-117c9.19068.750ENSTNIG00000001456si:ch211-117c9.19968.750Tetraodon_nigroviridis
ENSORLG00020003401si:ch211-117c9.16155.388ENSTTRG00000006600NUAK28455.025Tursiops_truncatus
ENSORLG00020003401si:ch211-117c9.19048.464ENSUAMG00000003216NUAK28248.123Ursus_americanus
ENSORLG00020003401si:ch211-117c9.19045.392ENSUMAG00000003830NUAK28545.068Ursus_maritimus
ENSORLG00020003401si:ch211-117c9.19048.469ENSVVUG00000013705NUAK28247.530Vulpes_vulpes
ENSORLG00020003401si:ch211-117c9.16252.826ENSXETG00000000974nuak27449.130Xenopus_tropicalis
ENSORLG00020003401si:ch211-117c9.19144.628ENSXCOG00000003678nuak210066.160Xiphophorus_couchianus
ENSORLG00020003401si:ch211-117c9.19145.124ENSXMAG00000025530nuak28445.124Xiphophorus_maculatus
ENSORLG00020003401si:ch211-117c9.110070.431ENSXMAG00000007457si:ch211-117c9.19670.045Xiphophorus_maculatus

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