EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020003457 (Gene tree)
Gene ID: -
Gene Symbol: zgc:123010
Alias: -
Full Name: zgc:123010
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 8369 bases
Position: chr15:21220460-21228828
Accession: ZDB-GENE-051120-15
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020002678	RRM_1	PF00076.22	1.2e-15	1	1
ENSORLP00020002691	RRM_1	PF00076.22	1.4e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020010906	-	1963	-	ENSORLP00020002678	468 (aa)	-	-
ENSORLT00020010880	-	2065	-	ENSORLP00020002691	502 (aa)	-	-

Gene Model

Click here to download ENSORLG00020003457's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020003457's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020003457	zgc:123010	100	79.958	ENSAPOG00000019633	zgc:123010	100	79.958	Acanthochromis_polyacanthus
ENSORLG00020003457	zgc:123010	81	53.003	ENSAPOG00000001034	-	85	53.533	Acanthochromis_polyacanthus
ENSORLG00020003457	zgc:123010	57	32.209	ENSAPOG00000005058	si:dkey-33c12.4	50	32.822	Acanthochromis_polyacanthus
ENSORLG00020003457	zgc:123010	65	80.592	ENSACIG00000021684	zgc:123010	77	80.592	Amphilophus_citrinellus
ENSORLG00020003457	zgc:123010	100	80.169	ENSAOCG00000005910	zgc:123010	92	80.169	Amphiprion_ocellaris
ENSORLG00020003457	zgc:123010	57	40.099	ENSAOCG00000000431	-	51	33.433	Amphiprion_ocellaris
ENSORLG00020003457	zgc:123010	100	80.380	ENSAPEG00000014305	zgc:123010	92	80.380	Amphiprion_percula
ENSORLG00020003457	zgc:123010	57	40.099	ENSAPEG00000023603	-	52	31.765	Amphiprion_percula
ENSORLG00020003457	zgc:123010	100	74.473	ENSATEG00000001220	zgc:123010	92	74.473	Anabas_testudineus
ENSORLG00020003457	zgc:123010	54	34.076	ENSATEG00000018885	si:dkey-33c12.4	50	34.076	Anabas_testudineus
ENSORLG00020003457	zgc:123010	96	51.754	ENSATEG00000022160	-	87	51.754	Anabas_testudineus
ENSORLG00020003457	zgc:123010	100	77.167	ENSACLG00000010188	zgc:123010	91	77.167	Astatotilapia_calliptera
ENSORLG00020003457	zgc:123010	95	51.754	ENSACLG00000012346	-	88	51.410	Astatotilapia_calliptera
ENSORLG00020003457	zgc:123010	99	60.941	ENSAMXG00000041967	zgc:123010	91	61.350	Astyanax_mexicanus
ENSORLG00020003457	zgc:123010	55	33.115	ENSCPBG00000024454	-	56	31.070	Chrysemys_picta_bellii
ENSORLG00020003457	zgc:123010	88	74.272	ENSCSEG00000006468	zgc:123010	67	74.272	Cynoglossus_semilaevis
ENSORLG00020003457	zgc:123010	100	79.114	ENSCVAG00000013288	zgc:123010	91	79.114	Cyprinodon_variegatus
ENSORLG00020003457	zgc:123010	54	40.097	ENSCVAG00000004187	-	52	36.486	Cyprinodon_variegatus
ENSORLG00020003457	zgc:123010	55	36.455	ENSDARG00000057890	si:dkey-33c12.4	61	33.246	Danio_rerio
ENSORLG00020003457	zgc:123010	91	64.598	ENSDARG00000039082	zgc:123010	91	63.457	Danio_rerio
ENSORLG00020003457	zgc:123010	66	36.782	ENSEBUG00000001368	-	59	37.644	Eptatretus_burgeri
ENSORLG00020003457	zgc:123010	60	32.213	ENSELUG00000001633	-	56	32.213	Esox_lucius
ENSORLG00020003457	zgc:123010	100	61.667	ENSELUG00000022008	zgc:123010	92	63.202	Esox_lucius
ENSORLG00020003457	zgc:123010	72	60.117	ENSELUG00000021447	-	92	54.184	Esox_lucius
ENSORLG00020003457	zgc:123010	52	35.556	ENSELUG00000002009	si:dkey-33c12.4	78	35.556	Esox_lucius
ENSORLG00020003457	zgc:123010	50	36.434	ENSFALG00000008867	-	99	34.496	Ficedula_albicollis
ENSORLG00020003457	zgc:123010	100	75.424	ENSFHEG00000002306	zgc:123010	91	76.321	Fundulus_heteroclitus
ENSORLG00020003457	zgc:123010	68	73.438	ENSGMOG00000018473	zgc:123010	88	73.333	Gadus_morhua
ENSORLG00020003457	zgc:123010	51	35.581	ENSGALG00000036747	TTC31	51	35.581	Gallus_gallus
ENSORLG00020003457	zgc:123010	100	77.215	ENSGAFG00000009373	zgc:123010	91	77.215	Gambusia_affinis
ENSORLG00020003457	zgc:123010	56	40.588	ENSGAFG00000017596	si:dkey-33c12.4	57	31.165	Gambusia_affinis
ENSORLG00020003457	zgc:123010	70	80.851	ENSGACG00000007620	zgc:123010	88	80.851	Gasterosteus_aculeatus
ENSORLG00020003457	zgc:123010	56	36.742	ENSGACG00000004936	-	81	36.742	Gasterosteus_aculeatus
ENSORLG00020003457	zgc:123010	95	52.088	ENSHBUG00000016720	-	91	50.417	Haplochromis_burtoni
ENSORLG00020003457	zgc:123010	85	30.501	ENSIPUG00000005998	si:dkey-33c12.4	58	31.122	Ictalurus_punctatus
ENSORLG00020003457	zgc:123010	100	77.684	ENSKMAG00000021350	zgc:123010	91	77.263	Kryptolebias_marmoratus
ENSORLG00020003457	zgc:123010	52	43.575	ENSKMAG00000006468	-	50	34.868	Kryptolebias_marmoratus
ENSORLG00020003457	zgc:123010	52	32.237	ENSLBEG00000017203	-	50	33.779	Labrus_bergylta
ENSORLG00020003457	zgc:123010	99	50.317	ENSLBEG00000013518	-	91	52.026	Labrus_bergylta
ENSORLG00020003457	zgc:123010	100	76.744	ENSLBEG00000023984	zgc:123010	91	76.744	Labrus_bergylta
ENSORLG00020003457	zgc:123010	87	30.720	ENSLACG00000004602	-	66	34.153	Latimeria_chalumnae
ENSORLG00020003457	zgc:123010	71	54.464	ENSLACG00000009001	zgc:123010	84	50.000	Latimeria_chalumnae
ENSORLG00020003457	zgc:123010	85	32.842	ENSLOCG00000001861	-	62	34.307	Lepisosteus_oculatus
ENSORLG00020003457	zgc:123010	97	55.263	ENSLOCG00000008967	zgc:123010	89	56.277	Lepisosteus_oculatus
ENSORLG00020003457	zgc:123010	66	58.786	ENSMAMG00000002460	-	76	59.524	Mastacembelus_armatus
ENSORLG00020003457	zgc:123010	66	58.466	ENSMAMG00000002377	-	71	58.466	Mastacembelus_armatus
ENSORLG00020003457	zgc:123010	70	72.477	ENSMAMG00000001145	zgc:123010	78	72.477	Mastacembelus_armatus
ENSORLG00020003457	zgc:123010	58	59.140	ENSMAMG00000003439	-	77	59.140	Mastacembelus_armatus
ENSORLG00020003457	zgc:123010	58	57.746	ENSMAMG00000003394	-	82	55.375	Mastacembelus_armatus
ENSORLG00020003457	zgc:123010	53	32.808	ENSMAMG00000004311	-	52	31.861	Mastacembelus_armatus
ENSORLG00020003457	zgc:123010	54	40.838	ENSMZEG00005000585	-	75	34.259	Maylandia_zebra
ENSORLG00020003457	zgc:123010	100	77.167	ENSMZEG00005027733	zgc:123010	91	77.167	Maylandia_zebra
ENSORLG00020003457	zgc:123010	71	55.588	ENSMZEG00005014740	-	82	55.588	Maylandia_zebra
ENSORLG00020003457	zgc:123010	63	55.700	ENSMMOG00000017955	-	73	55.700	Mola_mola
ENSORLG00020003457	zgc:123010	90	66.825	ENSMMOG00000010544	zgc:123010	90	69.740	Mola_mola
ENSORLG00020003457	zgc:123010	51	32.423	ENSMALG00000002265	si:dkey-33c12.4	52	31.790	Monopterus_albus
ENSORLG00020003457	zgc:123010	100	75.949	ENSMALG00000017698	zgc:123010	91	75.949	Monopterus_albus
ENSORLG00020003457	zgc:123010	94	65.227	ENSNBRG00000021157	zgc:123010	89	65.227	Neolamprologus_brichardi
ENSORLG00020003457	zgc:123010	94	74.165	ENSONIG00000018353	zgc:123010	91	74.165	Oreochromis_niloticus
ENSORLG00020003457	zgc:123010	50	61.277	ENSONIG00000000297	-	77	61.277	Oreochromis_niloticus
ENSORLG00020003457	zgc:123010	51	36.929	ENSONIG00000012263	-	82	36.680	Oreochromis_niloticus
ENSORLG00020003457	zgc:123010	55	40.500	ENSONIG00000007538	-	98	38.911	Oreochromis_niloticus
ENSORLG00020003457	zgc:123010	100	99.402	ENSORLG00000007675	zgc:123010	100	99.402	Oryzias_latipes
ENSORLG00020003457	zgc:123010	55	30.189	ENSORLG00000029651	si:dkey-33c12.4	53	30.721	Oryzias_latipes
ENSORLG00020003457	zgc:123010	100	98.805	ENSORLG00015008373	zgc:123010	92	98.805	Oryzias_latipes_hsok
ENSORLG00020003457	zgc:123010	100	91.239	ENSOMEG00000003408	zgc:123010	91	91.239	Oryzias_melastigma
ENSORLG00020003457	zgc:123010	100	52.842	ENSPKIG00000015521	zgc:123010	90	55.896	Paramormyrops_kingsleyae
ENSORLG00020003457	zgc:123010	83	34.174	ENSPKIG00000011819	-	61	34.577	Paramormyrops_kingsleyae
ENSORLG00020003457	zgc:123010	77	61.789	ENSPMGG00000020251	zgc:123010	91	57.757	Periophthalmus_magnuspinnatus
ENSORLG00020003457	zgc:123010	51	42.083	ENSPMAG00000009352	-	81	42.083	Petromyzon_marinus
ENSORLG00020003457	zgc:123010	100	77.004	ENSPFOG00000001073	zgc:123010	91	77.004	Poecilia_formosa
ENSORLG00020003457	zgc:123010	53	39.665	ENSPFOG00000017092	-	73	31.728	Poecilia_formosa
ENSORLG00020003457	zgc:123010	100	77.004	ENSPLAG00000007711	zgc:123010	91	77.004	Poecilia_latipinna
ENSORLG00020003457	zgc:123010	55	33.438	ENSPLAG00000022537	si:dkey-33c12.4	51	33.438	Poecilia_latipinna
ENSORLG00020003457	zgc:123010	100	77.167	ENSPMEG00000005092	zgc:123010	91	77.167	Poecilia_mexicana
ENSORLG00020003457	zgc:123010	63	72.635	ENSPREG00000019587	zgc:123010	66	72.635	Poecilia_reticulata
ENSORLG00020003457	zgc:123010	62	55.519	ENSPNYG00000023304	-	71	55.519	Pundamilia_nyererei
ENSORLG00020003457	zgc:123010	54	40.838	ENSPNYG00000001047	-	75	34.259	Pundamilia_nyererei
ENSORLG00020003457	zgc:123010	100	77.331	ENSPNYG00000007893	zgc:123010	91	77.331	Pundamilia_nyererei
ENSORLG00020003457	zgc:123010	62	30.946	ENSPNAG00000018386	si:dkey-33c12.4	55	30.946	Pygocentrus_nattereri
ENSORLG00020003457	zgc:123010	99	65.817	ENSPNAG00000007579	zgc:123010	91	66.807	Pygocentrus_nattereri
ENSORLG00020003457	zgc:123010	99	54.071	ENSSFOG00015021394	zgc:123010	91	53.862	Scleropages_formosus
ENSORLG00020003457	zgc:123010	53	39.209	ENSSFOG00015005186	-	54	37.812	Scleropages_formosus
ENSORLG00020003457	zgc:123010	68	57.669	ENSSMAG00000021096	-	90	49.362	Scophthalmus_maximus
ENSORLG00020003457	zgc:123010	52	32.248	ENSSMAG00000008147	si:dkey-33c12.4	55	30.423	Scophthalmus_maximus
ENSORLG00020003457	zgc:123010	100	76.050	ENSSMAG00000002904	zgc:123010	92	76.050	Scophthalmus_maximus
ENSORLG00020003457	zgc:123010	56	31.928	ENSSDUG00000010976	-	54	31.928	Seriola_dumerili
ENSORLG00020003457	zgc:123010	56	33.019	ENSSDUG00000003213	si:dkey-33c12.4	52	33.019	Seriola_dumerili
ENSORLG00020003457	zgc:123010	99	52.941	ENSSDUG00000014026	-	91	53.878	Seriola_dumerili
ENSORLG00020003457	zgc:123010	100	78.903	ENSSDUG00000008651	zgc:123010	92	78.903	Seriola_dumerili
ENSORLG00020003457	zgc:123010	56	32.704	ENSSLDG00000009448	si:dkey-33c12.4	55	31.063	Seriola_lalandi_dorsalis
ENSORLG00020003457	zgc:123010	100	78.692	ENSSLDG00000019386	zgc:123010	92	78.692	Seriola_lalandi_dorsalis
ENSORLG00020003457	zgc:123010	56	31.928	ENSSLDG00000012846	-	56	31.532	Seriola_lalandi_dorsalis
ENSORLG00020003457	zgc:123010	100	79.536	ENSSPAG00000013621	zgc:123010	92	79.536	Stegastes_partitus
ENSORLG00020003457	zgc:123010	55	40.104	ENSSPAG00000004843	-	59	35.000	Stegastes_partitus
ENSORLG00020003457	zgc:123010	100	67.728	ENSTRUG00000024824	zgc:123010	91	67.728	Takifugu_rubripes
ENSORLG00020003457	zgc:123010	57	35.439	ENSTRUG00000000057	-	60	35.202	Takifugu_rubripes
ENSORLG00020003457	zgc:123010	61	67.014	ENSTNIG00000001303	zgc:123010	88	67.014	Tetraodon_nigroviridis
ENSORLG00020003457	zgc:123010	55	36.641	ENSTNIG00000010542	-	86	37.023	Tetraodon_nigroviridis
ENSORLG00020003457	zgc:123010	52	38.776	ENSTNIG00000001154	-	100	38.776	Tetraodon_nigroviridis
ENSORLG00020003457	zgc:123010	50	54.741	ENSXETG00000033896	-	80	54.741	Xenopus_tropicalis
ENSORLG00020003457	zgc:123010	66	73.065	ENSXCOG00000012281	zgc:123010	73	73.065	Xiphophorus_couchianus
ENSORLG00020003457	zgc:123010	100	76.211	ENSXMAG00000002598	zgc:123010	100	76.000	Xiphophorus_maculatus