EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020003490 (Gene tree)
Gene ID: -
Gene Symbol: tra2a
Alias: -
Full Name: transformer 2 alpha homolog
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 10647 bases
Position: chr11:18015773-18026419
Accession: ZDB-GENE-040426-1391
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020002719	RRM_1	PF00076.22	4.2e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020010826	-	3211	-	ENSORLP00020002719	267 (aa)	-	-

Gene Model

Click here to download ENSORLG00020003490's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020003490's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020003490	tra2a	60	40.000	ENSORLG00020019326	elavl1a	79	40.000
ENSORLG00020003490	tra2a	60	66.667	ENSORLG00020001514	TRA2B	71	63.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020003490	tra2a	60	73.653	ENSG00000164548	TRA2A	84	75.000	Homo_sapiens
ENSORLG00020003490	tra2a	55	77.027	ENSAPOG00000017425	tra2a	90	65.918	Acanthochromis_polyacanthus
ENSORLG00020003490	tra2a	60	74.096	ENSAMEG00000003501	TRA2A	71	69.130	Ailuropoda_melanoleuca
ENSORLG00020003490	tra2a	55	79.195	ENSACIG00000001333	tra2a	79	79.866	Amphilophus_citrinellus
ENSORLG00020003490	tra2a	90	65.918	ENSAOCG00000015445	tra2a	90	67.416	Amphiprion_ocellaris
ENSORLG00020003490	tra2a	90	65.918	ENSAPEG00000018557	tra2a	90	67.416	Amphiprion_percula
ENSORLG00020003490	tra2a	60	67.935	ENSATEG00000000671	tra2a	83	67.200	Anabas_testudineus
ENSORLG00020003490	tra2a	60	77.019	ENSAPLG00000013689	TRA2A	86	72.247	Anas_platyrhynchos
ENSORLG00020003490	tra2a	60	74.251	ENSACAG00000013502	TRA2A	82	71.179	Anolis_carolinensis
ENSORLG00020003490	tra2a	50	75.000	ENSANAG00000035184	TRA2A	77	63.636	Aotus_nancymaae
ENSORLG00020003490	tra2a	60	68.132	ENSACLG00000024845	tra2a	90	63.333	Astatotilapia_calliptera
ENSORLG00020003490	tra2a	61	73.563	ENSAMXG00000005553	tra2a	94	69.787	Astyanax_mexicanus
ENSORLG00020003490	tra2a	60	74.096	ENSBTAG00000012622	TRA2A	82	69.565	Bos_taurus
ENSORLG00020003490	tra2a	60	73.653	ENSCJAG00000001509	-	82	69.264	Callithrix_jacchus
ENSORLG00020003490	tra2a	66	72.928	ENSCJAG00000045802	-	87	67.826	Callithrix_jacchus
ENSORLG00020003490	tra2a	60	74.096	ENSCAFG00000002788	TRA2A	83	69.565	Canis_familiaris
ENSORLG00020003490	tra2a	60	74.096	ENSCAFG00020002745	TRA2A	75	71.212	Canis_lupus_dingo
ENSORLG00020003490	tra2a	60	73.653	ENSTSYG00000000388	TRA2A	84	75.000	Carlito_syrichta
ENSORLG00020003490	tra2a	60	59.281	ENSCAPG00000017377	TRA2A	83	58.874	Cavia_aperea
ENSORLG00020003490	tra2a	60	73.653	ENSCPOG00000010739	TRA2A	82	69.264	Cavia_porcellus
ENSORLG00020003490	tra2a	60	73.653	ENSCCAG00000019576	TRA2A	84	75.000	Cebus_capucinus
ENSORLG00020003490	tra2a	60	73.653	ENSCATG00000041219	TRA2A	84	75.000	Cercocebus_atys
ENSORLG00020003490	tra2a	60	73.653	ENSCLAG00000007917	TRA2A	82	69.264	Chinchilla_lanigera
ENSORLG00020003490	tra2a	60	73.653	ENSCSAG00000014051	TRA2A	82	69.264	Chlorocebus_sabaeus
ENSORLG00020003490	tra2a	60	73.653	ENSCHOG00000001130	TRA2A	82	69.264	Choloepus_hoffmanni
ENSORLG00020003490	tra2a	60	75.152	ENSCPBG00000022466	TRA2A	82	70.563	Chrysemys_picta_bellii
ENSORLG00020003490	tra2a	60	73.653	ENSCANG00000031292	TRA2A	84	75.000	Colobus_angolensis_palliatus
ENSORLG00020003490	tra2a	60	72.781	ENSCGRG00001019980	Tra2a	82	68.831	Cricetulus_griseus_chok1gshd
ENSORLG00020003490	tra2a	60	72.781	ENSCGRG00000006087	Tra2a	86	68.831	Cricetulus_griseus_crigri
ENSORLG00020003490	tra2a	64	62.245	ENSCSEG00000012193	tra2a	96	68.229	Cynoglossus_semilaevis
ENSORLG00020003490	tra2a	52	74.126	ENSDARG00000007863	tra2a	88	65.714	Danio_rerio
ENSORLG00020003490	tra2a	60	73.653	ENSDNOG00000039446	TRA2A	82	69.264	Dasypus_novemcinctus
ENSORLG00020003490	tra2a	60	73.653	ENSDORG00000009361	Tra2a	82	69.432	Dipodomys_ordii
ENSORLG00020003490	tra2a	60	72.093	ENSETEG00000007250	TRA2A	70	69.652	Echinops_telfairi
ENSORLG00020003490	tra2a	60	74.096	ENSEASG00005022002	TRA2A	82	69.565	Equus_asinus_asinus
ENSORLG00020003490	tra2a	60	74.096	ENSECAG00000011508	TRA2A	82	69.565	Equus_caballus
ENSORLG00020003490	tra2a	60	72.455	ENSEEUG00000015674	TRA2A	82	68.398	Erinaceus_europaeus
ENSORLG00020003490	tra2a	77	57.692	ENSELUG00000005846	tra2a	91	54.237	Esox_lucius
ENSORLG00020003490	tra2a	60	74.096	ENSFCAG00000005361	TRA2A	82	69.565	Felis_catus
ENSORLG00020003490	tra2a	60	77.019	ENSFALG00000009605	TRA2A	85	72.889	Ficedula_albicollis
ENSORLG00020003490	tra2a	60	72.781	ENSFDAG00000004949	TRA2A	82	68.534	Fukomys_damarensis
ENSORLG00020003490	tra2a	63	59.794	ENSGMOG00000013740	tra2a	91	54.579	Gadus_morhua
ENSORLG00020003490	tra2a	60	77.019	ENSGALG00000010973	TRA2A	82	72.247	Gallus_gallus
ENSORLG00020003490	tra2a	90	60.078	ENSGACG00000006878	tra2a	89	60.078	Gasterosteus_aculeatus
ENSORLG00020003490	tra2a	60	76.074	ENSGAGG00000005793	TRA2A	82	71.179	Gopherus_agassizii
ENSORLG00020003490	tra2a	60	73.653	ENSGGOG00000009053	TRA2A	84	75.000	Gorilla_gorilla
ENSORLG00020003490	tra2a	60	68.681	ENSHBUG00000018234	tra2a	90	63.704	Haplochromis_burtoni
ENSORLG00020003490	tra2a	60	73.653	ENSHGLG00000012168	TRA2A	82	69.264	Heterocephalus_glaber_female
ENSORLG00020003490	tra2a	60	73.653	ENSHGLG00100014577	TRA2A	82	69.264	Heterocephalus_glaber_male
ENSORLG00020003490	tra2a	66	60.209	ENSHCOG00000006314	tra2a	80	59.375	Hippocampus_comes
ENSORLG00020003490	tra2a	60	73.653	ENSSTOG00000012073	TRA2A	82	69.264	Ictidomys_tridecemlineatus
ENSORLG00020003490	tra2a	60	73.653	ENSJJAG00000022787	Tra2a	84	69.432	Jaculus_jaculus
ENSORLG00020003490	tra2a	84	61.111	ENSLBEG00000005297	tra2a	85	62.698	Labrus_bergylta
ENSORLG00020003490	tra2a	60	72.024	ENSLACG00000014765	TRA2A	71	68.812	Latimeria_chalumnae
ENSORLG00020003490	tra2a	90	61.423	ENSLOCG00000011615	-	90	63.296	Lepisosteus_oculatus
ENSORLG00020003490	tra2a	60	73.214	ENSLAFG00000006598	TRA2A	82	68.966	Loxodonta_africana
ENSORLG00020003490	tra2a	60	73.653	ENSMFAG00000043211	TRA2A	84	75.000	Macaca_fascicularis
ENSORLG00020003490	tra2a	60	73.653	ENSMMUG00000006286	TRA2A	81	75.000	Macaca_mulatta
ENSORLG00020003490	tra2a	60	73.653	ENSMNEG00000040670	TRA2A	84	75.000	Macaca_nemestrina
ENSORLG00020003490	tra2a	60	73.653	ENSMLEG00000032154	TRA2A	84	75.000	Mandrillus_leucophaeus
ENSORLG00020003490	tra2a	60	68.132	ENSMZEG00005009142	tra2a	90	63.333	Maylandia_zebra
ENSORLG00020003490	tra2a	60	77.019	ENSMGAG00000010514	TRA2A	85	72.247	Meleagris_gallopavo
ENSORLG00020003490	tra2a	70	64.894	ENSMICG00000036849	-	69	64.607	Microcebus_murinus
ENSORLG00020003490	tra2a	60	73.653	ENSMICG00000043639	-	84	75.000	Microcebus_murinus
ENSORLG00020003490	tra2a	66	60.112	ENSMOCG00000006467	-	75	65.278	Microtus_ochrogaster
ENSORLG00020003490	tra2a	65	74.857	ENSMOCG00000010249	-	76	72.251	Microtus_ochrogaster
ENSORLG00020003490	tra2a	70	73.797	ENSMMOG00000020174	tra2a	79	72.368	Mola_mola
ENSORLG00020003490	tra2a	60	73.054	ENSMODG00000000807	TRA2A	82	69.697	Monodelphis_domestica
ENSORLG00020003490	tra2a	84	60.769	ENSMALG00000020875	tra2a	90	61.957	Monopterus_albus
ENSORLG00020003490	tra2a	60	72.781	ENSMUSG00000029817	Tra2a	83	68.831	Mus_musculus
ENSORLG00020003490	tra2a	60	72.781	MGP_PahariEiJ_G0022115	Tra2a	83	68.831	Mus_pahari
ENSORLG00020003490	tra2a	60	72.781	MGP_SPRETEiJ_G0029368	Tra2a	83	68.831	Mus_spretus
ENSORLG00020003490	tra2a	60	74.096	ENSMPUG00000013480	TRA2A	82	69.565	Mustela_putorius_furo
ENSORLG00020003490	tra2a	60	72.024	ENSMLUG00000013972	TRA2A	82	68.103	Myotis_lucifugus
ENSORLG00020003490	tra2a	60	73.054	ENSNGAG00000023805	Tra2a	82	68.996	Nannospalax_galili
ENSORLG00020003490	tra2a	55	75.484	ENSNBRG00000005992	tra2a	73	75.484	Neolamprologus_brichardi
ENSORLG00020003490	tra2a	60	73.653	ENSNLEG00000014794	TRA2A	84	75.000	Nomascus_leucogenys
ENSORLG00020003490	tra2a	66	56.044	ENSNLEG00000029659	-	88	58.940	Nomascus_leucogenys
ENSORLG00020003490	tra2a	60	72.619	ENSMEUG00000001202	TRA2A	82	69.397	Notamacropus_eugenii
ENSORLG00020003490	tra2a	60	72.455	ENSOPRG00000007606	TRA2A	82	67.965	Ochotona_princeps
ENSORLG00020003490	tra2a	60	73.653	ENSODEG00000008335	TRA2A	82	69.264	Octodon_degus
ENSORLG00020003490	tra2a	60	68.108	ENSONIG00000004503	tra2a	90	63.736	Oreochromis_niloticus
ENSORLG00020003490	tra2a	60	68.786	ENSOANG00000014202	TRA2A	82	65.823	Ornithorhynchus_anatinus
ENSORLG00020003490	tra2a	60	73.653	ENSOCUG00000024139	TRA2A	82	69.264	Oryctolagus_cuniculus
ENSORLG00020003490	tra2a	100	99.627	ENSORLG00000022191	tra2a	100	99.627	Oryzias_latipes
ENSORLG00020003490	tra2a	100	99.625	ENSORLG00015015485	tra2a	100	99.625	Oryzias_latipes_hsok
ENSORLG00020003490	tra2a	90	93.361	ENSOMEG00000017864	tra2a	89	93.361	Oryzias_melastigma
ENSORLG00020003490	tra2a	60	73.653	ENSOGAG00000009733	TRA2A	82	69.264	Otolemur_garnettii
ENSORLG00020003490	tra2a	60	70.588	ENSOARG00000002323	-	74	69.036	Ovis_aries
ENSORLG00020003490	tra2a	60	74.096	ENSOARG00000013147	TRA2A	82	69.565	Ovis_aries
ENSORLG00020003490	tra2a	60	73.653	ENSPPAG00000034382	TRA2A	84	75.000	Pan_paniscus
ENSORLG00020003490	tra2a	60	74.096	ENSPPRG00000015216	TRA2A	82	69.565	Panthera_pardus
ENSORLG00020003490	tra2a	60	74.096	ENSPTIG00000021114	TRA2A	82	69.565	Panthera_tigris_altaica
ENSORLG00020003490	tra2a	62	73.410	ENSPTRG00000018988	TRA2A	84	75.000	Pan_troglodytes
ENSORLG00020003490	tra2a	60	73.653	ENSPTRG00000046098	-	82	69.264	Pan_troglodytes
ENSORLG00020003490	tra2a	60	73.653	ENSPANG00000014541	TRA2A	82	69.264	Papio_anubis
ENSORLG00020003490	tra2a	90	62.642	ENSPKIG00000012298	tra2a	90	63.396	Paramormyrops_kingsleyae
ENSORLG00020003490	tra2a	60	74.251	ENSPSIG00000014993	TRA2A	88	67.347	Pelodiscus_sinensis
ENSORLG00020003490	tra2a	60	73.214	ENSPEMG00000008564	-	82	69.130	Peromyscus_maniculatus_bairdii
ENSORLG00020003490	tra2a	65	60.795	ENSPMAG00000007947	tra2a	68	60.428	Petromyzon_marinus
ENSORLG00020003490	tra2a	60	73.653	ENSPCIG00000007917	TRA2A	82	69.697	Phascolarctos_cinereus
ENSORLG00020003490	tra2a	60	73.653	ENSPPYG00000017728	TRA2A	82	69.264	Pongo_abelii
ENSORLG00020003490	tra2a	60	73.214	ENSPCAG00000004148	TRA2A	83	68.966	Procavia_capensis
ENSORLG00020003490	tra2a	60	54.037	ENSPCOG00000020465	TRA2A	79	56.000	Propithecus_coquereli
ENSORLG00020003490	tra2a	60	72.619	ENSPVAG00000011298	TRA2A	82	68.534	Pteropus_vampyrus
ENSORLG00020003490	tra2a	55	74.051	ENSPNYG00000020134	tra2a	76	74.051	Pundamilia_nyererei
ENSORLG00020003490	tra2a	61	70.718	ENSPNAG00000000482	tra2a	72	69.194	Pygocentrus_nattereri
ENSORLG00020003490	tra2a	60	72.781	ENSRNOG00000009156	Tra2a	82	68.831	Rattus_norvegicus
ENSORLG00020003490	tra2a	60	73.653	ENSRROG00000030758	TRA2A	84	75.000	Rhinopithecus_roxellana
ENSORLG00020003490	tra2a	60	73.653	ENSSBOG00000031562	TRA2A	84	75.000	Saimiri_boliviensis_boliviensis
ENSORLG00020003490	tra2a	60	73.653	ENSSHAG00000005727	TRA2A	82	70.130	Sarcophilus_harrisii
ENSORLG00020003490	tra2a	61	75.460	ENSSFOG00015014004	tra2a	90	62.264	Scleropages_formosus
ENSORLG00020003490	tra2a	64	68.947	ENSSMAG00000014242	tra2a	84	65.714	Scophthalmus_maximus
ENSORLG00020003490	tra2a	60	74.118	ENSSDUG00000005610	tra2a	89	68.605	Seriola_dumerili
ENSORLG00020003490	tra2a	55	74.510	ENSSLDG00000025577	tra2a	81	73.203	Seriola_lalandi_dorsalis
ENSORLG00020003490	tra2a	60	72.941	ENSSPUG00000006143	TRA2A	82	69.068	Sphenodon_punctatus
ENSORLG00020003490	tra2a	90	64.706	ENSSPAG00000004184	tra2a	90	66.176	Stegastes_partitus
ENSORLG00020003490	tra2a	60	74.096	ENSSSCG00000015387	TRA2A	82	69.565	Sus_scrofa
ENSORLG00020003490	tra2a	63	74.405	ENSTGUG00000002795	TRA2A	75	70.984	Taeniopygia_guttata
ENSORLG00020003490	tra2a	60	73.494	ENSTTRG00000008922	TRA2A	82	69.130	Tursiops_truncatus
ENSORLG00020003490	tra2a	54	74.510	ENSUMAG00000001181	TRA2A	79	74.510	Ursus_maritimus
ENSORLG00020003490	tra2a	60	74.096	ENSVVUG00000001045	TRA2A	82	69.565	Vulpes_vulpes
ENSORLG00020003490	tra2a	61	70.588	ENSXETG00000007397	tra2a	73	66.509	Xenopus_tropicalis