EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020003497 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 10441 bases
Position: chr17:4391080-4401520
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020002723	RRM_1	PF00076.22	7.7e-29	1	2
ENSORLP00020002723	RRM_1	PF00076.22	7.7e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020010821	-	3222	-	ENSORLP00020002723	506 (aa)	-	-

Gene Model

Click here to download ENSORLG00020003497's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020003497's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020003497	-	74	38.120	ENSORLG00020017943	ncl	58	35.506

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020003497	-	77	52.109	ENSAPOG00000014534	-	70	52.109	Acanthochromis_polyacanthus
ENSORLG00020003497	-	74	38.642	ENSAPOG00000023888	ncl	64	35.841	Acanthochromis_polyacanthus
ENSORLG00020003497	-	74	38.947	ENSACIG00000013234	ncl	65	38.481	Amphilophus_citrinellus
ENSORLG00020003497	-	77	52.369	ENSAOCG00000014792	-	63	52.369	Amphiprion_ocellaris
ENSORLG00020003497	-	74	39.164	ENSAOCG00000003133	ncl	55	38.500	Amphiprion_ocellaris
ENSORLG00020003497	-	77	52.369	ENSAPEG00000013612	-	63	52.369	Amphiprion_percula
ENSORLG00020003497	-	74	39.164	ENSAPEG00000002769	ncl	62	36.184	Amphiprion_percula
ENSORLG00020003497	-	74	39.426	ENSATEG00000013343	ncl	55	38.791	Anabas_testudineus
ENSORLG00020003497	-	83	48.989	ENSATEG00000019862	-	87	49.764	Anabas_testudineus
ENSORLG00020003497	-	70	35.440	ENSAPLG00000012897	-	61	34.646	Anas_platyrhynchos
ENSORLG00020003497	-	75	38.402	ENSACAG00000001006	-	58	35.780	Anolis_carolinensis
ENSORLG00020003497	-	62	40.575	ENSACLG00000026031	ncl	87	38.855	Astatotilapia_calliptera
ENSORLG00020003497	-	76	35.768	ENSAMXG00000001647	ncl	91	36.827	Astyanax_mexicanus
ENSORLG00020003497	-	73	34.392	ENSCPBG00000016444	-	56	33.924	Chrysemys_picta_bellii
ENSORLG00020003497	-	75	39.481	ENSCSEG00000015089	ncl	68	35.421	Cynoglossus_semilaevis
ENSORLG00020003497	-	73	38.360	ENSCVAG00000012600	ncl	56	38.384	Cyprinodon_variegatus
ENSORLG00020003497	-	72	39.516	ENSDARG00000002710	ncl	87	39.831	Danio_rerio
ENSORLG00020003497	-	71	35.230	ENSEBUG00000016173	ncl	55	33.103	Eptatretus_burgeri
ENSORLG00020003497	-	75	40.816	ENSELUG00000022826	-	81	40.665	Esox_lucius
ENSORLG00020003497	-	70	39.835	ENSELUG00000006033	ncl	51	45.652	Esox_lucius
ENSORLG00020003497	-	70	36.785	ENSFALG00000007592	-	53	36.269	Ficedula_albicollis
ENSORLG00020003497	-	74	38.501	ENSFHEG00000018000	ncl	63	37.203	Fundulus_heteroclitus
ENSORLG00020003497	-	71	37.534	ENSGMOG00000001341	ncl	56	37.088	Gadus_morhua
ENSORLG00020003497	-	76	34.091	ENSGALG00000032930	NCL	63	32.671	Gallus_gallus
ENSORLG00020003497	-	74	37.726	ENSGAFG00000015375	ncl	52	37.000	Gambusia_affinis
ENSORLG00020003497	-	74	37.688	ENSGACG00000008970	ncl	62	38.010	Gasterosteus_aculeatus
ENSORLG00020003497	-	73	33.862	ENSGAGG00000013330	-	57	33.002	Gopherus_agassizii
ENSORLG00020003497	-	74	40.526	ENSHBUG00000006869	ncl	58	39.563	Haplochromis_burtoni
ENSORLG00020003497	-	74	37.760	ENSHCOG00000010234	ncl	60	36.036	Hippocampus_comes
ENSORLG00020003497	-	62	38.125	ENSIPUG00000024556	ncl	82	37.798	Ictalurus_punctatus
ENSORLG00020003497	-	74	40.731	ENSKMAG00000008111	ncl	61	36.784	Kryptolebias_marmoratus
ENSORLG00020003497	-	74	39.164	ENSLBEG00000019073	ncl	59	37.990	Labrus_bergylta
ENSORLG00020003497	-	77	47.103	ENSLBEG00000007915	-	67	47.103	Labrus_bergylta
ENSORLG00020003497	-	74	46.615	ENSLBEG00000014278	-	86	46.615	Labrus_bergylta
ENSORLG00020003497	-	72	40.217	ENSLACG00000009328	ncl	57	38.974	Latimeria_chalumnae
ENSORLG00020003497	-	72	34.759	ENSLACG00000022167	-	80	33.933	Latimeria_chalumnae
ENSORLG00020003497	-	72	36.170	ENSLOCG00000004828	ncl	59	34.437	Lepisosteus_oculatus
ENSORLG00020003497	-	86	49.438	ENSMAMG00000003479	-	80	48.989	Mastacembelus_armatus
ENSORLG00020003497	-	74	40.526	ENSMZEG00005017438	ncl	54	40.256	Maylandia_zebra
ENSORLG00020003497	-	70	34.615	ENSMGAG00000008147	-	84	36.694	Meleagris_gallopavo
ENSORLG00020003497	-	62	38.125	ENSMMOG00000008553	ncl	86	37.538	Mola_mola
ENSORLG00020003497	-	74	34.606	ENSMODG00000002470	-	56	33.413	Monodelphis_domestica
ENSORLG00020003497	-	76	37.569	ENSMALG00000014827	ncl	54	35.561	Monopterus_albus
ENSORLG00020003497	-	55	40.636	ENSNBRG00000001232	ncl	81	40.000	Neolamprologus_brichardi
ENSORLG00020003497	-	55	40.636	ENSNBRG00000000146	-	84	40.000	Neolamprologus_brichardi
ENSORLG00020003497	-	74	35.079	ENSMEUG00000012335	-	64	32.965	Notamacropus_eugenii
ENSORLG00020003497	-	74	40.526	ENSONIG00000012508	ncl	58	39.423	Oreochromis_niloticus
ENSORLG00020003497	-	75	45.312	ENSONIG00000010631	-	96	44.619	Oreochromis_niloticus
ENSORLG00020003497	-	70	37.190	ENSOANG00000008732	-	60	36.856	Ornithorhynchus_anatinus
ENSORLG00020003497	-	90	96.711	ENSORLG00000004645	-	100	96.711	Oryzias_latipes
ENSORLG00020003497	-	72	38.544	ENSORLG00000007055	ncl	58	35.506	Oryzias_latipes
ENSORLG00020003497	-	74	36.693	ENSORLG00015013815	ncl	89	37.612	Oryzias_latipes_hsok
ENSORLG00020003497	-	95	96.266	ENSORLG00015006613	-	99	96.266	Oryzias_latipes_hsok
ENSORLG00020003497	-	74	39.948	ENSOMEG00000020786	ncl	57	37.892	Oryzias_melastigma
ENSORLG00020003497	-	95	67.702	ENSOMEG00000015864	-	99	67.702	Oryzias_melastigma
ENSORLG00020003497	-	75	40.979	ENSPKIG00000002604	ncl	74	40.302	Paramormyrops_kingsleyae
ENSORLG00020003497	-	71	34.677	ENSPSIG00000002361	-	54	33.671	Pelodiscus_sinensis
ENSORLG00020003497	-	74	36.126	ENSPMGG00000004709	ncl	85	35.260	Periophthalmus_magnuspinnatus
ENSORLG00020003497	-	70	35.519	ENSPCIG00000003293	-	52	34.121	Phascolarctos_cinereus
ENSORLG00020003497	-	74	36.815	ENSPFOG00000024205	ncl	53	38.142	Poecilia_formosa
ENSORLG00020003497	-	74	36.815	ENSPLAG00000024026	ncl	52	38.636	Poecilia_latipinna
ENSORLG00020003497	-	74	36.815	ENSPMEG00000006000	ncl	53	38.142	Poecilia_mexicana
ENSORLG00020003497	-	74	40.526	ENSPNYG00000020494	ncl	55	40.152	Pundamilia_nyererei
ENSORLG00020003497	-	72	39.623	ENSPNAG00000006192	ncl	51	39.332	Pygocentrus_nattereri
ENSORLG00020003497	-	70	33.799	ENSSHAG00000002702	-	68	30.512	Sarcophilus_harrisii
ENSORLG00020003497	-	63	35.045	ENSSFOG00015013153	-	79	33.945	Scleropages_formosus
ENSORLG00020003497	-	75	40.409	ENSSFOG00015008583	ncl	59	40.250	Scleropages_formosus
ENSORLG00020003497	-	83	50.117	ENSSMAG00000007582	-	69	49.550	Scophthalmus_maximus
ENSORLG00020003497	-	74	38.903	ENSSMAG00000021241	ncl	55	38.889	Scophthalmus_maximus
ENSORLG00020003497	-	83	47.758	ENSSDUG00000010922	-	74	50.495	Seriola_dumerili
ENSORLG00020003497	-	74	38.903	ENSSDUG00000006128	ncl	89	38.000	Seriola_dumerili
ENSORLG00020003497	-	76	53.316	ENSSLDG00000015784	-	68	51.485	Seriola_lalandi_dorsalis
ENSORLG00020003497	-	74	38.642	ENSSLDG00000002012	ncl	60	36.384	Seriola_lalandi_dorsalis
ENSORLG00020003497	-	73	32.908	ENSSPUG00000008244	-	69	30.388	Sphenodon_punctatus
ENSORLG00020003497	-	52	40.741	ENSSPAG00000002637	ncl	78	39.298	Stegastes_partitus
ENSORLG00020003497	-	76	52.926	ENSSPAG00000001859	-	63	52.926	Stegastes_partitus
ENSORLG00020003497	-	70	37.396	ENSTGUG00000009782	-	67	35.000	Taeniopygia_guttata
ENSORLG00020003497	-	72	36.927	ENSTRUG00000008185	ncl	62	34.676	Takifugu_rubripes
ENSORLG00020003497	-	71	37.432	ENSTNIG00000012186	ncl	64	34.684	Tetraodon_nigroviridis
ENSORLG00020003497	-	71	38.292	ENSXETG00000009517	ncl	52	38.624	Xenopus_tropicalis
ENSORLG00020003497	-	74	32.982	ENSXCOG00000003524	ncl	75	42.675	Xiphophorus_couchianus
ENSORLG00020003497	-	78	44.828	ENSXCOG00000007369	-	94	43.198	Xiphophorus_couchianus
ENSORLG00020003497	-	74	37.984	ENSXMAG00000005914	ncl	54	36.919	Xiphophorus_maculatus