EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020003642 (Gene tree)
Gene ID: -
Gene Symbol: pdcd11
Alias: -
Full Name: programmed cell death 11
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 17428 bases
Position: chr1:27745244-27762671
Accession: ZDB-GENE-030131-4076
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020023029	Suf	PF05843.14	6.3e-09	1	1
ENSORLP00020023029	S1	PF00575.23	6.6e-56	1	4
ENSORLP00020023029	S1	PF00575.23	6.6e-56	2	4
ENSORLP00020023029	S1	PF00575.23	6.6e-56	3	4
ENSORLP00020023029	S1	PF00575.23	6.6e-56	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020010585	-	7694	-	ENSORLP00020023029	1813 (aa)	-	-

Gene Model

Click here to download ENSORLG00020003642's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020003642's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020003642	pdcd11	99	43.601	ENSG00000148843	PDCD11	99	43.434	Homo_sapiens
ENSORLG00020003642	pdcd11	100	74.286	ENSAPOG00000015629	pdcd11	100	74.231	Acanthochromis_polyacanthus
ENSORLG00020003642	pdcd11	99	43.582	ENSAMEG00000017935	PDCD11	99	43.634	Ailuropoda_melanoleuca
ENSORLG00020003642	pdcd11	50	66.885	ENSACIG00000006458	-	98	66.885	Amphilophus_citrinellus
ENSORLG00020003642	pdcd11	100	74.546	ENSAOCG00000015287	pdcd11	100	74.367	Amphiprion_ocellaris
ENSORLG00020003642	pdcd11	54	72.368	ENSAPEG00000020240	pdcd11	97	72.368	Amphiprion_percula
ENSORLG00020003642	pdcd11	99	73.997	ENSATEG00000021043	pdcd11	99	74.162	Anabas_testudineus
ENSORLG00020003642	pdcd11	99	44.184	ENSAPLG00000010301	PDCD11	99	44.308	Anas_platyrhynchos
ENSORLG00020003642	pdcd11	99	46.021	ENSACAG00000004796	PDCD11	99	45.887	Anolis_carolinensis
ENSORLG00020003642	pdcd11	99	43.108	ENSANAG00000034576	PDCD11	99	43.374	Aotus_nancymaae
ENSORLG00020003642	pdcd11	98	85.382	ENSACLG00000018236	pdcd11	99	79.370	Astatotilapia_calliptera
ENSORLG00020003642	pdcd11	99	49.209	ENSAMXG00000005458	pdcd11	98	52.566	Astyanax_mexicanus
ENSORLG00020003642	pdcd11	99	43.949	ENSBTAG00000009715	PDCD11	99	43.843	Bos_taurus
ENSORLG00020003642	pdcd11	99	43.303	ENSCJAG00000018257	PDCD11	99	43.587	Callithrix_jacchus
ENSORLG00020003642	pdcd11	99	43.747	ENSCAFG00000010411	PDCD11	99	43.873	Canis_familiaris
ENSORLG00020003642	pdcd11	99	44.242	ENSCAFG00020010369	PDCD11	99	44.058	Canis_lupus_dingo
ENSORLG00020003642	pdcd11	99	44.038	ENSCHIG00000025218	PDCD11	99	43.896	Capra_hircus
ENSORLG00020003642	pdcd11	96	43.642	ENSTSYG00000033423	PDCD11	99	42.881	Carlito_syrichta
ENSORLG00020003642	pdcd11	95	38.208	ENSCAPG00000005386	PDCD11	99	37.943	Cavia_aperea
ENSORLG00020003642	pdcd11	99	43.261	ENSCPOG00000010957	PDCD11	99	43.620	Cavia_porcellus
ENSORLG00020003642	pdcd11	99	43.161	ENSCCAG00000018950	PDCD11	99	43.055	Cebus_capucinus
ENSORLG00020003642	pdcd11	99	43.395	ENSCATG00000044331	PDCD11	99	43.282	Cercocebus_atys
ENSORLG00020003642	pdcd11	99	42.918	ENSCLAG00000001029	PDCD11	99	42.941	Chinchilla_lanigera
ENSORLG00020003642	pdcd11	99	43.381	ENSCSAG00000005346	PDCD11	99	43.381	Chlorocebus_sabaeus
ENSORLG00020003642	pdcd11	84	70.543	ENSCHOG00000004796	PDCD11	77	70.543	Choloepus_hoffmanni
ENSORLG00020003642	pdcd11	92	61.932	ENSCPBG00000024487	PDCD11	100	61.932	Chrysemys_picta_bellii
ENSORLG00020003642	pdcd11	99	43.476	ENSCANG00000043300	PDCD11	99	43.647	Colobus_angolensis_palliatus
ENSORLG00020003642	pdcd11	99	43.078	ENSCGRG00001006458	Pdcd11	99	42.773	Cricetulus_griseus_chok1gshd
ENSORLG00020003642	pdcd11	99	42.948	ENSCGRG00000003583	Pdcd11	99	42.644	Cricetulus_griseus_crigri
ENSORLG00020003642	pdcd11	97	70.073	ENSCSEG00000010739	pdcd11	99	70.356	Cynoglossus_semilaevis
ENSORLG00020003642	pdcd11	100	68.720	ENSCVAG00000018903	pdcd11	100	68.720	Cyprinodon_variegatus
ENSORLG00020003642	pdcd11	100	53.056	ENSDARG00000052480	pdcd11	100	53.228	Danio_rerio
ENSORLG00020003642	pdcd11	99	43.386	ENSDNOG00000013838	PDCD11	99	43.266	Dasypus_novemcinctus
ENSORLG00020003642	pdcd11	99	43.127	ENSDORG00000010420	Pdcd11	99	43.319	Dipodomys_ordii
ENSORLG00020003642	pdcd11	55	32.598	FBgn0039182	CG5728	65	35.260	Drosophila_melanogaster
ENSORLG00020003642	pdcd11	92	41.227	ENSETEG00000000813	PDCD11	96	40.506	Echinops_telfairi
ENSORLG00020003642	pdcd11	73	51.034	ENSEBUG00000002358	-	88	51.034	Eptatretus_burgeri
ENSORLG00020003642	pdcd11	97	44.661	ENSEASG00005015159	PDCD11	99	45.106	Equus_asinus_asinus
ENSORLG00020003642	pdcd11	99	44.362	ENSECAG00000020507	PDCD11	99	44.356	Equus_caballus
ENSORLG00020003642	pdcd11	90	44.086	ENSEEUG00000009245	PDCD11	90	43.896	Erinaceus_europaeus
ENSORLG00020003642	pdcd11	100	59.276	ENSELUG00000004211	pdcd11	99	59.111	Esox_lucius
ENSORLG00020003642	pdcd11	99	43.750	ENSFCAG00000002384	PDCD11	99	43.955	Felis_catus
ENSORLG00020003642	pdcd11	99	45.903	ENSFALG00000008775	PDCD11	99	45.849	Ficedula_albicollis
ENSORLG00020003642	pdcd11	99	43.107	ENSFDAG00000009532	PDCD11	99	43.153	Fukomys_damarensis
ENSORLG00020003642	pdcd11	96	86.424	ENSFHEG00000022997	pdcd11	92	86.424	Fundulus_heteroclitus
ENSORLG00020003642	pdcd11	93	60.639	ENSGMOG00000004186	pdcd11	94	60.414	Gadus_morhua
ENSORLG00020003642	pdcd11	77	42.576	ENSGALG00000008265	PDCD11	99	42.033	Gallus_gallus
ENSORLG00020003642	pdcd11	96	70.315	ENSGAFG00000012806	pdcd11	100	70.315	Gambusia_affinis
ENSORLG00020003642	pdcd11	100	68.658	ENSGACG00000018233	pdcd11	97	80.789	Gasterosteus_aculeatus
ENSORLG00020003642	pdcd11	95	47.819	ENSGAGG00000024314	PDCD11	100	47.819	Gopherus_agassizii
ENSORLG00020003642	pdcd11	99	43.335	ENSGGOG00000011621	PDCD11	99	43.328	Gorilla_gorilla
ENSORLG00020003642	pdcd11	99	74.339	ENSHBUG00000020226	pdcd11	99	74.449	Haplochromis_burtoni
ENSORLG00020003642	pdcd11	99	43.860	ENSHGLG00000001462	PDCD11	99	43.504	Heterocephalus_glaber_female
ENSORLG00020003642	pdcd11	99	43.275	ENSHGLG00100018779	PDCD11	99	42.865	Heterocephalus_glaber_male
ENSORLG00020003642	pdcd11	100	68.482	ENSHCOG00000016006	pdcd11	100	68.462	Hippocampus_comes
ENSORLG00020003642	pdcd11	62	54.745	ENSIPUG00000015102	pdcd11	99	56.399	Ictalurus_punctatus
ENSORLG00020003642	pdcd11	99	42.988	ENSSTOG00000014553	PDCD11	99	43.041	Ictidomys_tridecemlineatus
ENSORLG00020003642	pdcd11	99	44.176	ENSJJAG00000015523	Pdcd11	99	43.985	Jaculus_jaculus
ENSORLG00020003642	pdcd11	50	68.553	ENSKMAG00000021182	pdcd11	99	68.553	Kryptolebias_marmoratus
ENSORLG00020003642	pdcd11	100	55.301	ENSLOCG00000011818	pdcd11	100	55.246	Lepisosteus_oculatus
ENSORLG00020003642	pdcd11	99	44.110	ENSLAFG00000008398	PDCD11	99	44.019	Loxodonta_africana
ENSORLG00020003642	pdcd11	99	43.317	ENSMFAG00000044058	PDCD11	99	43.222	Macaca_fascicularis
ENSORLG00020003642	pdcd11	99	43.265	ENSMMUG00000007058	PDCD11	99	43.176	Macaca_mulatta
ENSORLG00020003642	pdcd11	99	43.423	ENSMNEG00000040726	PDCD11	99	43.328	Macaca_nemestrina
ENSORLG00020003642	pdcd11	99	43.803	ENSMLEG00000040978	PDCD11	99	43.804	Mandrillus_leucophaeus
ENSORLG00020003642	pdcd11	100	74.202	ENSMAMG00000009572	pdcd11	100	74.532	Mastacembelus_armatus
ENSORLG00020003642	pdcd11	99	74.229	ENSMZEG00005008949	pdcd11	99	74.339	Maylandia_zebra
ENSORLG00020003642	pdcd11	99	44.829	ENSMGAG00000010482	PDCD11	99	45.136	Meleagris_gallopavo
ENSORLG00020003642	pdcd11	90	45.828	ENSMAUG00000014924	Pdcd11	96	45.753	Mesocricetus_auratus
ENSORLG00020003642	pdcd11	99	43.800	ENSMICG00000012421	PDCD11	99	43.853	Microcebus_murinus
ENSORLG00020003642	pdcd11	99	42.681	ENSMOCG00000021792	Pdcd11	99	42.485	Microtus_ochrogaster
ENSORLG00020003642	pdcd11	99	60.511	ENSMMOG00000007572	pdcd11	98	67.826	Mola_mola
ENSORLG00020003642	pdcd11	99	49.310	ENSMODG00000011077	PDCD11	100	42.139	Monodelphis_domestica
ENSORLG00020003642	pdcd11	100	61.855	ENSMALG00000003859	pdcd11	99	70.620	Monopterus_albus
ENSORLG00020003642	pdcd11	99	43.117	MGP_CAROLIEiJ_G0023050	Pdcd11	99	43.337	Mus_caroli
ENSORLG00020003642	pdcd11	99	43.314	ENSMUSG00000025047	Pdcd11	99	42.933	Mus_musculus
ENSORLG00020003642	pdcd11	99	42.501	MGP_PahariEiJ_G0014540	Pdcd11	99	42.630	Mus_pahari
ENSORLG00020003642	pdcd11	99	43.413	MGP_SPRETEiJ_G0023971	Pdcd11	99	43.139	Mus_spretus
ENSORLG00020003642	pdcd11	99	43.830	ENSMPUG00000016829	PDCD11	99	44.072	Mustela_putorius_furo
ENSORLG00020003642	pdcd11	99	43.879	ENSMLUG00000004997	PDCD11	99	43.932	Myotis_lucifugus
ENSORLG00020003642	pdcd11	99	42.713	ENSNGAG00000018143	Pdcd11	99	42.971	Nannospalax_galili
ENSORLG00020003642	pdcd11	85	78.413	ENSNBRG00000021596	pdcd11	97	74.063	Neolamprologus_brichardi
ENSORLG00020003642	pdcd11	99	42.263	ENSNLEG00000026700	PDCD11	99	42.263	Nomascus_leucogenys
ENSORLG00020003642	pdcd11	70	68.000	ENSMEUG00000013719	-	70	68.000	Notamacropus_eugenii
ENSORLG00020003642	pdcd11	99	45.272	ENSOPRG00000010593	PDCD11	97	45.272	Ochotona_princeps
ENSORLG00020003642	pdcd11	99	43.425	ENSODEG00000008079	PDCD11	99	43.485	Octodon_degus
ENSORLG00020003642	pdcd11	99	74.284	ENSONIG00000018835	pdcd11	99	74.615	Oreochromis_niloticus
ENSORLG00020003642	pdcd11	99	42.888	ENSOANG00000001636	-	99	43.359	Ornithorhynchus_anatinus
ENSORLG00020003642	pdcd11	99	43.591	ENSOCUG00000006312	PDCD11	99	43.524	Oryctolagus_cuniculus
ENSORLG00020003642	pdcd11	100	98.842	ENSORLG00015001618	pdcd11	100	98.842	Oryzias_latipes_hsok
ENSORLG00020003642	pdcd11	65	88.682	ENSOMEG00000010904	pdcd11	98	88.345	Oryzias_melastigma
ENSORLG00020003642	pdcd11	99	43.919	ENSOGAG00000008683	PDCD11	99	43.813	Otolemur_garnettii
ENSORLG00020003642	pdcd11	99	43.826	ENSOARG00000003719	PDCD11	99	43.684	Ovis_aries
ENSORLG00020003642	pdcd11	99	42.796	ENSPPAG00000024593	PDCD11	99	42.751	Pan_paniscus
ENSORLG00020003642	pdcd11	99	43.829	ENSPPRG00000015133	PDCD11	99	44.115	Panthera_pardus
ENSORLG00020003642	pdcd11	99	43.724	ENSPTIG00000011433	PDCD11	99	44.008	Panthera_tigris_altaica
ENSORLG00020003642	pdcd11	99	43.654	ENSPTRG00000002911	PDCD11	99	43.594	Pan_troglodytes
ENSORLG00020003642	pdcd11	99	43.548	ENSPANG00000020959	PDCD11	99	43.548	Papio_anubis
ENSORLG00020003642	pdcd11	99	54.986	ENSPKIG00000000973	pdcd11	99	54.909	Paramormyrops_kingsleyae
ENSORLG00020003642	pdcd11	78	44.868	ENSPSIG00000005102	PDCD11	95	44.868	Pelodiscus_sinensis
ENSORLG00020003642	pdcd11	84	67.556	ENSPMGG00000007289	pdcd11	100	66.889	Periophthalmus_magnuspinnatus
ENSORLG00020003642	pdcd11	99	42.614	ENSPEMG00000010315	Pdcd11	99	42.804	Peromyscus_maniculatus_bairdii
ENSORLG00020003642	pdcd11	99	41.208	ENSPMAG00000003098	pdcd11	99	41.379	Petromyzon_marinus
ENSORLG00020003642	pdcd11	100	43.423	ENSPCIG00000001118	PDCD11	100	43.658	Phascolarctos_cinereus
ENSORLG00020003642	pdcd11	100	71.019	ENSPFOG00000006012	pdcd11	100	71.468	Poecilia_formosa
ENSORLG00020003642	pdcd11	96	70.154	ENSPLAG00000014494	pdcd11	100	70.092	Poecilia_latipinna
ENSORLG00020003642	pdcd11	92	73.885	ENSPMEG00000018177	pdcd11	100	72.824	Poecilia_mexicana
ENSORLG00020003642	pdcd11	100	70.511	ENSPREG00000000475	pdcd11	100	70.904	Poecilia_reticulata
ENSORLG00020003642	pdcd11	99	39.573	ENSPPYG00000002621	PDCD11	99	39.515	Pongo_abelii
ENSORLG00020003642	pdcd11	63	49.140	ENSPCAG00000011663	PDCD11	65	49.614	Procavia_capensis
ENSORLG00020003642	pdcd11	90	46.205	ENSPCOG00000023327	PDCD11	97	45.672	Propithecus_coquereli
ENSORLG00020003642	pdcd11	99	43.197	ENSPVAG00000004176	PDCD11	99	43.356	Pteropus_vampyrus
ENSORLG00020003642	pdcd11	99	74.174	ENSPNYG00000003979	pdcd11	99	74.284	Pundamilia_nyererei
ENSORLG00020003642	pdcd11	95	57.020	ENSPNAG00000017225	pdcd11	100	57.020	Pygocentrus_nattereri
ENSORLG00020003642	pdcd11	99	42.706	ENSRNOG00000020304	Pdcd11	99	42.812	Rattus_norvegicus
ENSORLG00020003642	pdcd11	99	43.317	ENSRBIG00000011889	PDCD11	99	43.441	Rhinopithecus_bieti
ENSORLG00020003642	pdcd11	99	43.317	ENSRROG00000030483	PDCD11	99	43.381	Rhinopithecus_roxellana
ENSORLG00020003642	pdcd11	64	44.238	YMR229C	-	80	34.118	Saccharomyces_cerevisiae
ENSORLG00020003642	pdcd11	99	41.068	ENSSBOG00000030308	PDCD11	99	41.068	Saimiri_boliviensis_boliviensis
ENSORLG00020003642	pdcd11	100	43.084	ENSSHAG00000018258	PDCD11	100	43.266	Sarcophilus_harrisii
ENSORLG00020003642	pdcd11	100	55.586	ENSSFOG00015003881	pdcd11	100	55.507	Scleropages_formosus
ENSORLG00020003642	pdcd11	100	75.303	ENSSMAG00000006612	pdcd11	100	75.303	Scophthalmus_maximus
ENSORLG00020003642	pdcd11	98	65.893	ENSSDUG00000021302	pdcd11	99	70.820	Seriola_dumerili
ENSORLG00020003642	pdcd11	50	72.252	ENSSLDG00000010228	pdcd11	99	73.597	Seriola_lalandi_dorsalis
ENSORLG00020003642	pdcd11	73	65.306	ENSSARG00000002540	PDCD11	67	65.306	Sorex_araneus
ENSORLG00020003642	pdcd11	97	73.780	ENSSPAG00000017558	pdcd11	100	73.837	Stegastes_partitus
ENSORLG00020003642	pdcd11	99	44.297	ENSSSCG00000010599	PDCD11	99	44.709	Sus_scrofa
ENSORLG00020003642	pdcd11	70	66.354	ENSTRUG00000014291	pdcd11	100	66.432	Takifugu_rubripes
ENSORLG00020003642	pdcd11	99	67.006	ENSTNIG00000012085	pdcd11	99	67.006	Tetraodon_nigroviridis
ENSORLG00020003642	pdcd11	99	41.570	ENSTBEG00000001893	PDCD11	99	41.781	Tupaia_belangeri
ENSORLG00020003642	pdcd11	99	41.478	ENSTTRG00000003356	PDCD11	99	41.746	Tursiops_truncatus
ENSORLG00020003642	pdcd11	99	43.807	ENSUAMG00000018015	PDCD11	99	43.886	Ursus_americanus
ENSORLG00020003642	pdcd11	99	43.091	ENSUMAG00000023567	PDCD11	99	43.061	Ursus_maritimus
ENSORLG00020003642	pdcd11	66	51.111	ENSVPAG00000007405	PDCD11	75	51.111	Vicugna_pacos
ENSORLG00020003642	pdcd11	99	43.747	ENSVVUG00000004457	PDCD11	99	43.849	Vulpes_vulpes
ENSORLG00020003642	pdcd11	100	44.492	ENSXETG00000009482	pdcd11	100	44.280	Xenopus_tropicalis
ENSORLG00020003642	pdcd11	100	59.243	ENSXCOG00000012420	pdcd11	100	59.572	Xiphophorus_couchianus
ENSORLG00020003642	pdcd11	100	71.295	ENSXMAG00000004638	pdcd11	100	71.743	Xiphophorus_maculatus