EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020003697 (Gene tree)
Gene ID: -
Gene Symbol: shq1
Alias: -
Full Name: SHQ1%2C H/ACA ribonucleoprotein assembly factor
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 39401 bases
Position: chr5:21563737-21603137
Accession: ZDB-GENE-070112-1412
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020002926	SHQ1	PF04925.15	1.8e-65	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020010486	-	4459	-	ENSORLP00020002926	553 (aa)	-	-

Gene Model

Click here to download ENSORLG00020003697's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020003697's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020003697	shq1	79	59.417	ENSG00000144736	SHQ1	96	70.833	Homo_sapiens
ENSORLG00020003697	shq1	98	66.333	ENSAPOG00000000397	shq1	98	66.667	Acanthochromis_polyacanthus
ENSORLG00020003697	shq1	77	58.352	ENSAMEG00000015140	SHQ1	75	59.259	Ailuropoda_melanoleuca
ENSORLG00020003697	shq1	99	65.776	ENSACIG00000021249	shq1	99	66.778	Amphilophus_citrinellus
ENSORLG00020003697	shq1	98	65.340	ENSAOCG00000023311	shq1	98	65.837	Amphiprion_ocellaris
ENSORLG00020003697	shq1	98	66.054	ENSAPEG00000021686	shq1	98	66.388	Amphiprion_percula
ENSORLG00020003697	shq1	99	65.109	ENSATEG00000008475	shq1	99	65.109	Anabas_testudineus
ENSORLG00020003697	shq1	79	56.152	ENSAPLG00000013926	SHQ1	85	57.737	Anas_platyrhynchos
ENSORLG00020003697	shq1	76	59.070	ENSACAG00000014809	SHQ1	64	60.046	Anolis_carolinensis
ENSORLG00020003697	shq1	83	41.164	ENSANAG00000030500	-	72	42.518	Aotus_nancymaae
ENSORLG00020003697	shq1	85	56.301	ENSANAG00000029241	SHQ1	75	59.722	Aotus_nancymaae
ENSORLG00020003697	shq1	99	65.042	ENSACLG00000023077	shq1	99	62.821	Astatotilapia_calliptera
ENSORLG00020003697	shq1	77	64.554	ENSAMXG00000043822	shq1	74	64.554	Astyanax_mexicanus
ENSORLG00020003697	shq1	79	59.641	ENSBTAG00000005436	SHQ1	74	60.417	Bos_taurus
ENSORLG00020003697	shq1	76	30.822	WBGene00021655	Y48A5A.1	91	31.235	Caenorhabditis_elegans
ENSORLG00020003697	shq1	79	58.744	ENSCJAG00000015131	SHQ1	74	59.491	Callithrix_jacchus
ENSORLG00020003697	shq1	81	57.424	ENSCAFG00000006434	SHQ1	74	59.491	Canis_familiaris
ENSORLG00020003697	shq1	81	57.642	ENSCAFG00020016743	SHQ1	74	59.722	Canis_lupus_dingo
ENSORLG00020003697	shq1	79	59.060	ENSCHIG00000012271	SHQ1	68	60.648	Capra_hircus
ENSORLG00020003697	shq1	73	56.553	ENSTSYG00000014439	SHQ1	75	56.977	Carlito_syrichta
ENSORLG00020003697	shq1	86	47.012	ENSCAPG00000009343	SHQ1	98	47.012	Cavia_aperea
ENSORLG00020003697	shq1	79	58.876	ENSCPOG00000011443	SHQ1	74	59.954	Cavia_porcellus
ENSORLG00020003697	shq1	83	43.656	ENSCCAG00000036087	-	73	45.024	Cebus_capucinus
ENSORLG00020003697	shq1	79	50.673	ENSCCAG00000027080	SHQ1	73	51.157	Cebus_capucinus
ENSORLG00020003697	shq1	79	59.641	ENSCATG00000041238	SHQ1	74	60.417	Cercocebus_atys
ENSORLG00020003697	shq1	79	58.837	ENSCLAG00000004206	SHQ1	75	60.970	Chinchilla_lanigera
ENSORLG00020003697	shq1	57	58.589	ENSCSAG00000011514	SHQ1	70	58.601	Chlorocebus_sabaeus
ENSORLG00020003697	shq1	51	66.667	ENSCHOG00000003273	-	84	66.667	Choloepus_hoffmanni
ENSORLG00020003697	shq1	79	60.268	ENSCPBG00000006441	SHQ1	70	60.970	Chrysemys_picta_bellii
ENSORLG00020003697	shq1	79	39.509	ENSCING00000008013	-	94	40.698	Ciona_intestinalis
ENSORLG00020003697	shq1	78	40.138	ENSCSAVG00000002332	-	97	40.093	Ciona_savignyi
ENSORLG00020003697	shq1	79	60.090	ENSCANG00000039295	SHQ1	75	60.880	Colobus_angolensis_palliatus
ENSORLG00020003697	shq1	77	60.321	ENSCGRG00001012583	Shq1	76	60.185	Cricetulus_griseus_chok1gshd
ENSORLG00020003697	shq1	77	60.321	ENSCGRG00000009849	Shq1	76	60.185	Cricetulus_griseus_crigri
ENSORLG00020003697	shq1	74	76.341	ENSCSEG00000007829	shq1	99	62.561	Cynoglossus_semilaevis
ENSORLG00020003697	shq1	98	66.551	ENSCVAG00000020049	shq1	99	68.000	Cyprinodon_variegatus
ENSORLG00020003697	shq1	78	67.674	ENSDARG00000058522	shq1	72	68.000	Danio_rerio
ENSORLG00020003697	shq1	77	60.092	ENSDNOG00000033937	SHQ1	75	59.954	Dasypus_novemcinctus
ENSORLG00020003697	shq1	79	52.018	ENSETEG00000005766	SHQ1	75	52.546	Echinops_telfairi
ENSORLG00020003697	shq1	64	47.696	ENSEBUG00000005445	shq1	73	50.000	Eptatretus_burgeri
ENSORLG00020003697	shq1	79	58.389	ENSEASG00005002237	SHQ1	87	54.851	Equus_asinus_asinus
ENSORLG00020003697	shq1	79	58.837	ENSECAG00000015673	SHQ1	85	55.489	Equus_caballus
ENSORLG00020003697	shq1	79	60.538	ENSEEUG00000010568	SHQ1	75	61.111	Erinaceus_europaeus
ENSORLG00020003697	shq1	74	72.236	ENSELUG00000003476	shq1	81	68.684	Esox_lucius
ENSORLG00020003697	shq1	73	59.759	ENSFCAG00000012781	SHQ1	75	59.722	Felis_catus
ENSORLG00020003697	shq1	74	61.575	ENSFALG00000013428	SHQ1	70	61.432	Ficedula_albicollis
ENSORLG00020003697	shq1	79	58.969	ENSFDAG00000005595	SHQ1	66	59.954	Fukomys_damarensis
ENSORLG00020003697	shq1	96	67.673	ENSFHEG00000017552	shq1	99	66.838	Fundulus_heteroclitus
ENSORLG00020003697	shq1	70	73.711	ENSGMOG00000007350	shq1	100	73.711	Gadus_morhua
ENSORLG00020003697	shq1	79	59.326	ENSGALG00000007798	SHQ1	70	60.185	Gallus_gallus
ENSORLG00020003697	shq1	70	77.320	ENSGACG00000011797	shq1	100	77.320	Gasterosteus_aculeatus
ENSORLG00020003697	shq1	79	58.969	ENSGGOG00000034818	SHQ1	74	59.722	Gorilla_gorilla
ENSORLG00020003697	shq1	99	65.152	ENSHBUG00000010857	shq1	99	65.825	Haplochromis_burtoni
ENSORLG00020003697	shq1	73	59.036	ENSHGLG00000003637	SHQ1	67	59.353	Heterocephalus_glaber_female
ENSORLG00020003697	shq1	73	59.036	ENSHGLG00100011957	SHQ1	67	59.353	Heterocephalus_glaber_male
ENSORLG00020003697	shq1	97	63.556	ENSHCOG00000010799	shq1	95	64.758	Hippocampus_comes
ENSORLG00020003697	shq1	78	66.435	ENSIPUG00000001247	shq1	74	66.745	Ictalurus_punctatus
ENSORLG00020003697	shq1	78	57.919	ENSSTOG00000010043	SHQ1	79	58.333	Ictidomys_tridecemlineatus
ENSORLG00020003697	shq1	77	59.954	ENSJJAG00000017611	Shq1	76	60.046	Jaculus_jaculus
ENSORLG00020003697	shq1	92	69.759	ENSKMAG00000004457	shq1	99	67.406	Kryptolebias_marmoratus
ENSORLG00020003697	shq1	78	62.557	ENSLACG00000014243	SHQ1	65	62.731	Latimeria_chalumnae
ENSORLG00020003697	shq1	79	68.009	ENSLOCG00000009970	shq1	75	67.963	Lepisosteus_oculatus
ENSORLG00020003697	shq1	79	42.697	ENSMFAG00000037396	-	72	42.890	Macaca_fascicularis
ENSORLG00020003697	shq1	79	59.417	ENSMFAG00000039148	SHQ1	74	60.185	Macaca_fascicularis
ENSORLG00020003697	shq1	79	42.697	ENSMMUG00000021761	-	72	42.890	Macaca_mulatta
ENSORLG00020003697	shq1	70	58.040	ENSMMUG00000009571	SHQ1	69	58.854	Macaca_mulatta
ENSORLG00020003697	shq1	79	59.417	ENSMNEG00000032667	SHQ1	74	60.185	Macaca_nemestrina
ENSORLG00020003697	shq1	79	59.193	ENSMLEG00000038493	SHQ1	74	59.954	Mandrillus_leucophaeus
ENSORLG00020003697	shq1	98	62.993	ENSMAMG00000023432	shq1	95	63.175	Mastacembelus_armatus
ENSORLG00020003697	shq1	99	65.320	ENSMZEG00005008649	shq1	99	65.993	Maylandia_zebra
ENSORLG00020003697	shq1	79	59.641	ENSMGAG00000009640	SHQ1	71	60.508	Meleagris_gallopavo
ENSORLG00020003697	shq1	77	60.092	ENSMAUG00000022030	Shq1	76	59.954	Mesocricetus_auratus
ENSORLG00020003697	shq1	82	55.650	ENSMICG00000009224	SHQ1	74	58.102	Microcebus_murinus
ENSORLG00020003697	shq1	79	58.876	ENSMOCG00000017836	Shq1	76	59.722	Microtus_ochrogaster
ENSORLG00020003697	shq1	97	63.605	ENSMMOG00000010569	shq1	98	63.778	Mola_mola
ENSORLG00020003697	shq1	77	57.078	ENSMODG00000003926	SHQ1	78	57.143	Monodelphis_domestica
ENSORLG00020003697	shq1	100	65.327	ENSMALG00000008870	shq1	99	65.662	Monopterus_albus
ENSORLG00020003697	shq1	80	58.186	MGP_CAROLIEiJ_G0028689	Shq1	76	60.417	Mus_caroli
ENSORLG00020003697	shq1	77	60.183	ENSMUSG00000035378	Shq1	76	60.880	Mus_musculus
ENSORLG00020003697	shq1	79	59.152	MGP_PahariEiJ_G0022440	Shq1	76	60.880	Mus_pahari
ENSORLG00020003697	shq1	82	57.725	MGP_SPRETEiJ_G0029717	Shq1	76	60.648	Mus_spretus
ENSORLG00020003697	shq1	81	57.424	ENSMPUG00000017006	SHQ1	73	59.259	Mustela_putorius_furo
ENSORLG00020003697	shq1	86	49.615	ENSMLUG00000013539	SHQ1	73	57.513	Myotis_lucifugus
ENSORLG00020003697	shq1	91	47.969	ENSNGAG00000023317	Shq1	75	53.191	Nannospalax_galili
ENSORLG00020003697	shq1	83	61.584	ENSNBRG00000024004	shq1	98	62.574	Neolamprologus_brichardi
ENSORLG00020003697	shq1	85	56.478	ENSNLEG00000002731	SHQ1	74	60.185	Nomascus_leucogenys
ENSORLG00020003697	shq1	67	54.630	ENSMEUG00000009350	-	70	54.630	Notamacropus_eugenii
ENSORLG00020003697	shq1	79	58.652	ENSODEG00000009192	SHQ1	73	65.789	Octodon_degus
ENSORLG00020003697	shq1	99	65.210	ENSONIG00000020264	shq1	99	66.050	Oreochromis_niloticus
ENSORLG00020003697	shq1	73	60.817	ENSOCUG00000016695	SHQ1	74	60.739	Oryctolagus_cuniculus
ENSORLG00020003697	shq1	100	96.926	ENSORLG00000023538	shq1	100	96.926	Oryzias_latipes
ENSORLG00020003697	shq1	100	96.383	ENSORLG00015021040	shq1	100	96.383	Oryzias_latipes_hsok
ENSORLG00020003697	shq1	99	89.550	ENSOMEG00000001225	shq1	100	88.288	Oryzias_melastigma
ENSORLG00020003697	shq1	83	55.717	ENSOGAG00000003898	SHQ1	76	58.945	Otolemur_garnettii
ENSORLG00020003697	shq1	79	58.889	ENSOARG00000009547	SHQ1	75	59.633	Ovis_aries
ENSORLG00020003697	shq1	84	42.041	ENSPPAG00000043263	-	72	43.458	Pan_paniscus
ENSORLG00020003697	shq1	79	59.641	ENSPPAG00000027714	SHQ1	74	60.417	Pan_paniscus
ENSORLG00020003697	shq1	73	59.759	ENSPPRG00000004769	SHQ1	75	59.722	Panthera_pardus
ENSORLG00020003697	shq1	73	56.829	ENSPTIG00000011478	SHQ1	74	56.909	Panthera_tigris_altaica
ENSORLG00020003697	shq1	79	59.641	ENSPTRG00000015106	SHQ1	74	60.417	Pan_troglodytes
ENSORLG00020003697	shq1	84	41.752	ENSPTRG00000048303	-	72	43.124	Pan_troglodytes
ENSORLG00020003697	shq1	79	58.520	ENSPANG00000002881	SHQ1	74	60.417	Papio_anubis
ENSORLG00020003697	shq1	76	68.884	ENSPKIG00000021517	shq1	72	68.873	Paramormyrops_kingsleyae
ENSORLG00020003697	shq1	79	58.929	ENSPSIG00000005536	SHQ1	71	59.815	Pelodiscus_sinensis
ENSORLG00020003697	shq1	97	59.123	ENSPMGG00000008838	shq1	97	59.123	Periophthalmus_magnuspinnatus
ENSORLG00020003697	shq1	70	60.553	ENSPEMG00000000251	Shq1	76	59.954	Peromyscus_maniculatus_bairdii
ENSORLG00020003697	shq1	78	56.689	ENSPMAG00000005372	shq1	94	59.375	Petromyzon_marinus
ENSORLG00020003697	shq1	94	68.797	ENSPFOG00000003118	shq1	97	70.356	Poecilia_formosa
ENSORLG00020003697	shq1	78	66.892	ENSPMEG00000011076	shq1	98	68.090	Poecilia_mexicana
ENSORLG00020003697	shq1	86	67.495	ENSPREG00000000591	shq1	92	67.909	Poecilia_reticulata
ENSORLG00020003697	shq1	79	59.641	ENSPPYG00000013717	SHQ1	74	60.417	Pongo_abelii
ENSORLG00020003697	shq1	74	59.809	ENSPCAG00000009035	SHQ1	75	59.954	Procavia_capensis
ENSORLG00020003697	shq1	79	56.920	ENSPCOG00000008415	SHQ1	74	59.217	Propithecus_coquereli
ENSORLG00020003697	shq1	73	58.413	ENSPVAG00000017392	SHQ1	75	60.046	Pteropus_vampyrus
ENSORLG00020003697	shq1	99	65.042	ENSPNYG00000003878	shq1	99	65.882	Pundamilia_nyererei
ENSORLG00020003697	shq1	77	68.384	ENSPNAG00000026840	shq1	70	69.087	Pygocentrus_nattereri
ENSORLG00020003697	shq1	79	58.744	ENSRNOG00000005433	Shq1	71	60.648	Rattus_norvegicus
ENSORLG00020003697	shq1	73	58.722	ENSRBIG00000026280	SHQ1	74	58.726	Rhinopithecus_bieti
ENSORLG00020003697	shq1	73	61.446	ENSRROG00000034126	SHQ1	75	61.343	Rhinopithecus_roxellana
ENSORLG00020003697	shq1	79	53.363	ENSSBOG00000021038	SHQ1	73	53.935	Saimiri_boliviensis_boliviensis
ENSORLG00020003697	shq1	78	58.770	ENSSHAG00000015077	SHQ1	77	58.676	Sarcophilus_harrisii
ENSORLG00020003697	shq1	79	70.615	ENSSFOG00015016241	shq1	74	72.167	Scleropages_formosus
ENSORLG00020003697	shq1	95	68.761	ENSSMAG00000016151	shq1	99	65.391	Scophthalmus_maximus
ENSORLG00020003697	shq1	99	66.281	ENSSDUG00000011986	shq1	99	66.612	Seriola_dumerili
ENSORLG00020003697	shq1	99	66.223	ENSSLDG00000013908	shq1	99	66.942	Seriola_lalandi_dorsalis
ENSORLG00020003697	shq1	60	57.185	ENSSARG00000007119	SHQ1	60	57.185	Sorex_araneus
ENSORLG00020003697	shq1	63	57.103	ENSSPUG00000011526	-	61	58.104	Sphenodon_punctatus
ENSORLG00020003697	shq1	82	56.033	ENSSSCG00000011518	SHQ1	74	61.201	Sus_scrofa
ENSORLG00020003697	shq1	73	61.483	ENSTGUG00000009933	SHQ1	75	61.149	Taeniopygia_guttata
ENSORLG00020003697	shq1	98	61.578	ENSTRUG00000009446	shq1	99	61.790	Takifugu_rubripes
ENSORLG00020003697	shq1	73	70.192	ENSTNIG00000007354	shq1	94	70.413	Tetraodon_nigroviridis
ENSORLG00020003697	shq1	76	70.213	ENSTBEG00000011295	SHQ1	52	70.213	Tupaia_belangeri
ENSORLG00020003697	shq1	78	59.142	ENSTTRG00000005320	SHQ1	75	59.491	Tursiops_truncatus
ENSORLG00020003697	shq1	81	56.570	ENSUMAG00000024031	SHQ1	74	59.574	Ursus_maritimus
ENSORLG00020003697	shq1	55	58.974	ENSVPAG00000004880	SHQ1	72	52.344	Vicugna_pacos
ENSORLG00020003697	shq1	81	57.424	ENSVVUG00000013906	SHQ1	74	59.491	Vulpes_vulpes
ENSORLG00020003697	shq1	79	58.503	ENSXETG00000032215	shq1	67	59.367	Xenopus_tropicalis