EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020003719 (Gene tree)
Gene ID: -
Gene Symbol: GFI1B
Alias: -
Full Name: growth factor independent 1B transcriptional repressor
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 3823 bases
Position: chr12:25383540-25387362
Accession: 4238
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020023083	zf-C2H2	PF00096.26	1.2e-24	1	4
ENSORLP00020023083	zf-C2H2	PF00096.26	1.2e-24	2	4
ENSORLP00020023083	zf-C2H2	PF00096.26	1.2e-24	3	4
ENSORLP00020023083	zf-C2H2	PF00096.26	1.2e-24	4	4
ENSORLP00020002928	zf-C2H2	PF00096.26	1.5e-24	1	4
ENSORLP00020002928	zf-C2H2	PF00096.26	1.5e-24	2	4
ENSORLP00020002928	zf-C2H2	PF00096.26	1.5e-24	3	4
ENSORLP00020002928	zf-C2H2	PF00096.26	1.5e-24	4	4
ENSORLP00020023083	zf-met	PF12874.7	6.4e-08	1	2
ENSORLP00020023083	zf-met	PF12874.7	6.4e-08	2	2
ENSORLP00020002928	zf-met	PF12874.7	8.6e-08	1	2
ENSORLP00020002928	zf-met	PF12874.7	8.6e-08	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020010479	GFI1B-202	2529	-	ENSORLP00020002928	326 (aa)	-	-
ENSORLT00020010467	GFI1B-201	2532	-	ENSORLP00020023083	310 (aa)	-	-

Gene Model

Click here to download ENSORLG00020003719's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020003719's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020003719	GFI1B	100	56.140	ENSORLG00020002817	GFI1	100	56.140
ENSORLG00020003719	GFI1B	55	45.000	ENSORLG00020018069	-	92	42.361
ENSORLG00020003719	GFI1B	54	45.833	ENSORLG00020009943	-	92	45.833
ENSORLG00020003719	GFI1B	55	48.684	ENSORLG00020000481	-	81	47.205
ENSORLG00020003719	GFI1B	54	41.611	ENSORLG00020010020	-	71	41.611
ENSORLG00020003719	GFI1B	57	43.506	ENSORLG00020011234	-	74	43.506
ENSORLG00020003719	GFI1B	62	45.763	ENSORLG00020017850	-	93	43.750
ENSORLG00020003719	GFI1B	55	39.877	ENSORLG00020016666	-	92	40.404
ENSORLG00020003719	GFI1B	54	43.976	ENSORLG00020011075	-	79	43.976
ENSORLG00020003719	GFI1B	55	43.662	ENSORLG00020021857	-	50	43.662
ENSORLG00020003719	GFI1B	100	50.258	ENSORLG00020001602	gfi1ab	100	50.258
ENSORLG00020003719	GFI1B	54	46.154	ENSORLG00020010560	-	98	42.177
ENSORLG00020003719	GFI1B	54	43.262	ENSORLG00020004370	-	83	43.262
ENSORLG00020003719	GFI1B	65	41.250	ENSORLG00020018921	-	73	41.250
ENSORLG00020003719	GFI1B	57	40.816	ENSORLG00020018503	-	85	40.816
ENSORLG00020003719	GFI1B	62	45.255	ENSORLG00020000161	-	75	45.255
ENSORLG00020003719	GFI1B	55	41.765	ENSORLG00020010950	-	96	42.202
ENSORLG00020003719	GFI1B	82	44.340	ENSORLG00020019227	-	55	44.340
ENSORLG00020003719	GFI1B	55	42.038	ENSORLG00020017528	-	75	42.038
ENSORLG00020003719	GFI1B	56	44.654	ENSORLG00020011149	-	79	44.654
ENSORLG00020003719	GFI1B	71	37.226	ENSORLG00020008787	snai2	82	37.226
ENSORLG00020003719	GFI1B	57	42.857	ENSORLG00020004889	ZNF319	90	42.857
ENSORLG00020003719	GFI1B	56	45.882	ENSORLG00020007967	-	87	43.671
ENSORLG00020003719	GFI1B	56	46.471	ENSORLG00020007599	-	81	46.471
ENSORLG00020003719	GFI1B	54	45.000	ENSORLG00020010880	-	80	44.099
ENSORLG00020003719	GFI1B	56	36.184	ENSORLG00020010937	patz1	50	36.184
ENSORLG00020003719	GFI1B	60	45.625	ENSORLG00020015703	-	54	45.625
ENSORLG00020003719	GFI1B	60	43.373	ENSORLG00020017483	-	96	44.304
ENSORLG00020003719	GFI1B	59	39.375	ENSORLG00020008484	-	83	39.375
ENSORLG00020003719	GFI1B	54	42.857	ENSORLG00020010916	-	56	42.857
ENSORLG00020003719	GFI1B	54	42.963	ENSORLG00020007074	-	95	42.636
ENSORLG00020003719	GFI1B	54	48.936	ENSORLG00020009965	-	74	50.376
ENSORLG00020003719	GFI1B	84	43.976	ENSORLG00020010636	-	73	43.976
ENSORLG00020003719	GFI1B	65	44.375	ENSORLG00020001707	-	86	44.375
ENSORLG00020003719	GFI1B	53	45.946	ENSORLG00020000639	-	88	45.946
ENSORLG00020003719	GFI1B	62	39.450	ENSORLG00020018791	-	88	39.450
ENSORLG00020003719	GFI1B	55	40.994	ENSORLG00020018051	prdm5	73	40.994
ENSORLG00020003719	GFI1B	58	40.741	ENSORLG00020021196	-	50	40.741
ENSORLG00020003719	GFI1B	59	46.429	ENSORLG00020009139	-	98	40.678
ENSORLG00020003719	GFI1B	68	41.228	ENSORLG00020000219	-	67	41.615
ENSORLG00020003719	GFI1B	59	42.771	ENSORLG00020016754	-	94	42.771
ENSORLG00020003719	GFI1B	59	47.468	ENSORLG00020017164	-	98	44.099
ENSORLG00020003719	GFI1B	64	45.238	ENSORLG00020009089	-	58	45.238
ENSORLG00020003719	GFI1B	54	41.727	ENSORLG00020006144	-	76	37.762
ENSORLG00020003719	GFI1B	56	45.652	ENSORLG00020010804	-	94	45.833
ENSORLG00020003719	GFI1B	54	41.667	ENSORLG00020008933	-	69	41.667
ENSORLG00020003719	GFI1B	54	39.375	ENSORLG00020006820	-	64	39.375
ENSORLG00020003719	GFI1B	54	39.216	ENSORLG00020005815	-	79	39.216
ENSORLG00020003719	GFI1B	55	39.752	ENSORLG00020020419	-	85	39.752
ENSORLG00020003719	GFI1B	54	42.529	ENSORLG00020008018	-	74	43.452
ENSORLG00020003719	GFI1B	55	47.170	ENSORLG00020019341	-	77	57.143
ENSORLG00020003719	GFI1B	54	43.885	ENSORLG00020010647	-	82	43.885
ENSORLG00020003719	GFI1B	91	41.250	ENSORLG00020010038	-	80	41.250
ENSORLG00020003719	GFI1B	54	48.120	ENSORLG00020005132	-	68	48.120
ENSORLG00020003719	GFI1B	86	41.441	ENSORLG00020010171	-	99	41.441
ENSORLG00020003719	GFI1B	54	42.537	ENSORLG00020010953	-	77	42.537
ENSORLG00020003719	GFI1B	56	35.838	ENSORLG00020009554	-	77	35.838
ENSORLG00020003719	GFI1B	59	41.071	ENSORLG00020000009	znf710b	52	41.071
ENSORLG00020003719	GFI1B	59	45.669	ENSORLG00020009184	-	82	45.669
ENSORLG00020003719	GFI1B	84	46.281	ENSORLG00020009180	-	97	46.281
ENSORLG00020003719	GFI1B	55	32.653	ENSORLG00020001758	-	55	32.692
ENSORLG00020003719	GFI1B	57	37.222	ENSORLG00020001791	-	62	37.222
ENSORLG00020003719	GFI1B	54	42.593	ENSORLG00020008424	-	80	42.593
ENSORLG00020003719	GFI1B	60	41.935	ENSORLG00020002128	-	89	41.935
ENSORLG00020003719	GFI1B	57	43.609	ENSORLG00020018685	znf319b	85	43.609
ENSORLG00020003719	GFI1B	57	40.141	ENSORLG00020004353	-	97	40.141
ENSORLG00020003719	GFI1B	54	45.775	ENSORLG00020018495	-	61	45.775
ENSORLG00020003719	GFI1B	60	39.521	ENSORLG00020007790	zbtb48	54	39.521
ENSORLG00020003719	GFI1B	85	39.773	ENSORLG00020008744	-	70	39.773
ENSORLG00020003719	GFI1B	55	45.033	ENSORLG00020006148	-	55	45.033
ENSORLG00020003719	GFI1B	54	42.478	ENSORLG00020010285	znf646	57	42.478
ENSORLG00020003719	GFI1B	60	40.580	ENSORLG00020016037	-	94	46.465
ENSORLG00020003719	GFI1B	65	45.161	ENSORLG00020001912	znf236	69	45.161
ENSORLG00020003719	GFI1B	57	42.500	ENSORLG00020009857	-	94	43.046
ENSORLG00020003719	GFI1B	61	43.452	ENSORLG00020007018	-	80	43.452
ENSORLG00020003719	GFI1B	55	41.892	ENSORLG00020008346	-	97	42.353
ENSORLG00020003719	GFI1B	76	44.144	ENSORLG00020009419	-	99	43.333
ENSORLG00020003719	GFI1B	58	40.964	ENSORLG00020008891	-	86	42.262
ENSORLG00020003719	GFI1B	53	45.349	ENSORLG00020010932	-	71	45.882
ENSORLG00020003719	GFI1B	100	38.235	ENSORLG00020012967	scrt1b	68	38.235
ENSORLG00020003719	GFI1B	58	46.429	ENSORLG00020010250	-	96	44.138
ENSORLG00020003719	GFI1B	55	47.260	ENSORLG00020017514	-	90	47.260
ENSORLG00020003719	GFI1B	80	42.958	ENSORLG00020000246	-	98	42.958

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020003719	GFI1B	100	76.687	ENSAPOG00000001296	gfi1b	100	76.687	Acanthochromis_polyacanthus
ENSORLG00020003719	GFI1B	100	68.502	ENSACIG00000002190	gfi1b	90	78.676	Amphilophus_citrinellus
ENSORLG00020003719	GFI1B	100	76.687	ENSAOCG00000021187	gfi1b	100	76.687	Amphiprion_ocellaris
ENSORLG00020003719	GFI1B	100	76.994	ENSAPEG00000016196	gfi1b	100	76.994	Amphiprion_percula
ENSORLG00020003719	GFI1B	100	81.155	ENSATEG00000002534	gfi1b	100	81.155	Anabas_testudineus
ENSORLG00020003719	GFI1B	100	57.270	ENSAPLG00000003373	GFI1B	100	57.270	Anas_platyrhynchos
ENSORLG00020003719	GFI1B	100	71.037	ENSACLG00000027053	gfi1b	100	71.037	Astatotilapia_calliptera
ENSORLG00020003719	GFI1B	100	67.857	ENSAMXG00000037544	GFI1B	100	67.857	Astyanax_mexicanus
ENSORLG00020003719	GFI1B	100	57.391	ENSCAPG00000010404	GFI1B	100	57.391	Cavia_aperea
ENSORLG00020003719	GFI1B	100	56.772	ENSCPBG00000021186	GFI1B	100	56.772	Chrysemys_picta_bellii
ENSORLG00020003719	GFI1B	100	76.220	ENSCSEG00000001315	gfi1b	100	76.220	Cynoglossus_semilaevis
ENSORLG00020003719	GFI1B	100	74.847	ENSCVAG00000017168	gfi1b	100	74.847	Cyprinodon_variegatus
ENSORLG00020003719	GFI1B	100	65.143	ENSDARG00000079947	gfi1b	99	81.857	Danio_rerio
ENSORLG00020003719	GFI1B	66	51.961	ENSEEUG00000012609	-	90	51.961	Erinaceus_europaeus
ENSORLG00020003719	GFI1B	100	70.326	ENSELUG00000016933	gfi1b	100	70.326	Esox_lucius
ENSORLG00020003719	GFI1B	100	54.247	ENSFALG00000001479	GFI1B	100	54.247	Ficedula_albicollis
ENSORLG00020003719	GFI1B	100	79.878	ENSFHEG00000015138	gfi1b	100	79.878	Fundulus_heteroclitus
ENSORLG00020003719	GFI1B	77	82.083	ENSGMOG00000019123	gfi1b	90	82.083	Gadus_morhua
ENSORLG00020003719	GFI1B	100	57.522	ENSGALG00000003478	GFI1B	100	57.522	Gallus_gallus
ENSORLG00020003719	GFI1B	75	91.026	ENSGAFG00000003059	gfi1b	100	91.026	Gambusia_affinis
ENSORLG00020003719	GFI1B	100	71.060	ENSGACG00000018134	gfi1b	100	71.060	Gasterosteus_aculeatus
ENSORLG00020003719	GFI1B	100	58.036	ENSGAGG00000021327	GFI1B	100	58.036	Gopherus_agassizii
ENSORLG00020003719	GFI1B	100	71.037	ENSHBUG00000005451	gfi1b	100	71.037	Haplochromis_burtoni
ENSORLG00020003719	GFI1B	100	73.780	ENSHCOG00000013713	gfi1b	100	73.780	Hippocampus_comes
ENSORLG00020003719	GFI1B	100	68.222	ENSIPUG00000012769	gfi1b	100	68.222	Ictalurus_punctatus
ENSORLG00020003719	GFI1B	99	52.973	ENSJJAG00000016355	Gfi1b	100	52.973	Jaculus_jaculus
ENSORLG00020003719	GFI1B	100	77.204	ENSKMAG00000016047	gfi1b	100	77.204	Kryptolebias_marmoratus
ENSORLG00020003719	GFI1B	100	74.551	ENSLBEG00000020297	gfi1b	99	74.850	Labrus_bergylta
ENSORLG00020003719	GFI1B	100	59.941	ENSLACG00000012207	GFI1B	100	59.941	Latimeria_chalumnae
ENSORLG00020003719	GFI1B	100	67.656	ENSLOCG00000005750	gfi1b	100	67.656	Lepisosteus_oculatus
ENSORLG00020003719	GFI1B	100	58.258	ENSLAFG00000022367	GFI1B	100	58.258	Loxodonta_africana
ENSORLG00020003719	GFI1B	100	80.000	ENSMAMG00000003040	gfi1b	100	80.000	Mastacembelus_armatus
ENSORLG00020003719	GFI1B	99	70.948	ENSMZEG00005015594	gfi1b	99	70.948	Maylandia_zebra
ENSORLG00020003719	GFI1B	100	57.227	ENSMGAG00000006129	GFI1B	100	57.227	Meleagris_gallopavo
ENSORLG00020003719	GFI1B	100	76.596	ENSMMOG00000011764	gfi1b	100	76.596	Mola_mola
ENSORLG00020003719	GFI1B	100	52.304	ENSMODG00000012600	GFI1B	100	52.304	Monodelphis_domestica
ENSORLG00020003719	GFI1B	100	76.220	ENSMALG00000004034	gfi1b	100	76.220	Monopterus_albus
ENSORLG00020003719	GFI1B	99	58.788	ENSNGAG00000003333	Gfi1b	100	58.788	Nannospalax_galili
ENSORLG00020003719	GFI1B	54	66.418	ENSNBRG00000012376	-	99	66.418	Neolamprologus_brichardi
ENSORLG00020003719	GFI1B	100	70.213	ENSNBRG00000012391	gfi1b	100	70.213	Neolamprologus_brichardi
ENSORLG00020003719	GFI1B	100	70.517	ENSONIG00000013011	gfi1b	94	93.296	Oreochromis_niloticus
ENSORLG00020003719	GFI1B	100	59.459	ENSOANG00000014723	GFI1B	100	59.459	Ornithorhynchus_anatinus
ENSORLG00020003719	GFI1B	84	97.080	ENSORLG00000014390	GFI1B	96	97.080	Oryzias_latipes
ENSORLG00020003719	GFI1B	100	98.773	ENSORLG00015017142	gfi1b	100	98.773	Oryzias_latipes_hsok
ENSORLG00020003719	GFI1B	100	91.104	ENSOMEG00000015149	GFI1B	100	91.104	Oryzias_melastigma
ENSORLG00020003719	GFI1B	100	57.267	ENSOGAG00000008879	GFI1B	100	58.806	Otolemur_garnettii
ENSORLG00020003719	GFI1B	100	67.656	ENSPKIG00000007643	gfi1b	100	67.656	Paramormyrops_kingsleyae
ENSORLG00020003719	GFI1B	100	58.333	ENSPSIG00000012112	GFI1B	100	58.333	Pelodiscus_sinensis
ENSORLG00020003719	GFI1B	99	67.976	ENSPMGG00000006021	gfi1b	99	68.882	Periophthalmus_magnuspinnatus
ENSORLG00020003719	GFI1B	100	51.902	ENSPCIG00000019724	GFI1B	100	51.902	Phascolarctos_cinereus
ENSORLG00020003719	GFI1B	100	77.844	ENSPFOG00000003460	gfi1b	100	77.844	Poecilia_formosa
ENSORLG00020003719	GFI1B	100	78.963	ENSPLAG00000021960	GFI1B	100	78.963	Poecilia_latipinna
ENSORLG00020003719	GFI1B	100	76.923	ENSPLAG00000017181	GFI1B	100	76.923	Poecilia_latipinna
ENSORLG00020003719	GFI1B	100	78.963	ENSPMEG00000019220	gfi1b	100	78.963	Poecilia_mexicana
ENSORLG00020003719	GFI1B	100	78.963	ENSPMEG00000001556	GFI1B	100	78.963	Poecilia_mexicana
ENSORLG00020003719	GFI1B	100	79.268	ENSPREG00000021718	gfi1b	100	79.268	Poecilia_reticulata
ENSORLG00020003719	GFI1B	100	70.122	ENSPNYG00000018422	gfi1b	100	70.122	Pundamilia_nyererei
ENSORLG00020003719	GFI1B	100	67.257	ENSPNAG00000021118	gfi1b	100	67.257	Pygocentrus_nattereri
ENSORLG00020003719	GFI1B	100	47.733	ENSSHAG00000006462	GFI1B	100	47.733	Sarcophilus_harrisii
ENSORLG00020003719	GFI1B	83	62.544	ENSSFOG00015011566	gfi1b	90	62.544	Scleropages_formosus
ENSORLG00020003719	GFI1B	100	77.204	ENSSMAG00000015181	gfi1b	98	77.204	Scophthalmus_maximus
ENSORLG00020003719	GFI1B	100	80.183	ENSSDUG00000011604	gfi1b	100	80.183	Seriola_dumerili
ENSORLG00020003719	GFI1B	100	79.573	ENSSLDG00000013823	gfi1b	100	79.573	Seriola_lalandi_dorsalis
ENSORLG00020003719	GFI1B	100	47.522	ENSSPUG00000016039	GFI1B	100	47.522	Sphenodon_punctatus
ENSORLG00020003719	GFI1B	100	76.687	ENSSPAG00000022914	gfi1b	100	76.687	Stegastes_partitus
ENSORLG00020003719	GFI1B	54	91.228	ENSTGUG00000005282	-	99	91.228	Taeniopygia_guttata
ENSORLG00020003719	GFI1B	100	75.000	ENSTRUG00000004525	gfi1b	100	75.000	Takifugu_rubripes
ENSORLG00020003719	GFI1B	100	74.772	ENSTNIG00000003834	gfi1b	100	74.772	Tetraodon_nigroviridis
ENSORLG00020003719	GFI1B	100	40.841	ENSTBEG00000014459	GFI1B	100	40.841	Tupaia_belangeri
ENSORLG00020003719	GFI1B	100	56.509	ENSXETG00000006263	gfi1b	100	58.112	Xenopus_tropicalis
ENSORLG00020003719	GFI1B	100	79.268	ENSXMAG00000027589	gfi1b	100	79.268	Xiphophorus_maculatus