EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020003827 (Gene tree)
Gene ID: -
Gene Symbol: hbs1l
Alias: -
Full Name: HBS1-like translational GTPase
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 23166 bases
Position: chr24:13027054-13050219
Accession: ZDB-GENE-030131-2987
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020023164	GTP_EFTU	PF00009.27	5.6e-47	1	1
ENSORLP00020003016	GTP_EFTU	PF00009.27	1.4e-27	1	1
ENSORLP00020003016	GTP_EFTU_D2	PF03144.25	1.6e-07	1	1
ENSORLP00020023164	GTP_EFTU_D2	PF03144.25	1.8e-07	1	1
ENSORLP00020003016	GTP_EFTU_D3	PF03143.17	8.1e-28	1	1
ENSORLP00020023164	GTP_EFTU_D3	PF03143.17	9.9e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020010337	-	3831	-	ENSORLP00020003016	653 (aa)	-	-
ENSORLT00020010269	-	3978	-	ENSORLP00020023164	702 (aa)	-	-
ENSORLT00020010395	-	4876	-	ENSORLP00020023113	642 (aa)	-	-

Gene Model

Click here to download ENSORLG00020003827's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020003827's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020003827	hbs1l	61	39.720	ENSORLG00020016364	gspt1l	76	39.720
ENSORLG00020003827	hbs1l	61	37.528	ENSORLG00020008094	si:dkey-37o8.1	96	37.528
ENSORLG00020003827	hbs1l	61	41.190	ENSORLG00020012076	eef1a	95	41.190
ENSORLG00020003827	hbs1l	60	40.000	ENSORLG00020006749	-	72	39.953
ENSORLG00020003827	hbs1l	61	37.071	ENSORLG00020018651	-	55	58.654

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020003827	hbs1l	100	70.621	ENSG00000112339	HBS1L	95	85.714	Homo_sapiens
ENSORLG00020003827	hbs1l	93	71.779	ENSAPOG00000013169	hbs1l	97	71.319	Acanthochromis_polyacanthus
ENSORLG00020003827	hbs1l	99	70.381	ENSAMEG00000009749	HBS1L	99	69.761	Ailuropoda_melanoleuca
ENSORLG00020003827	hbs1l	76	87.523	ENSACIG00000017087	hbs1l	91	87.523	Amphilophus_citrinellus
ENSORLG00020003827	hbs1l	100	84.211	ENSAPEG00000008320	hbs1l	100	84.211	Amphiprion_percula
ENSORLG00020003827	hbs1l	100	84.091	ENSATEG00000004459	hbs1l	100	84.091	Anabas_testudineus
ENSORLG00020003827	hbs1l	98	67.994	ENSAPLG00000007791	HBS1L	100	68.345	Anas_platyrhynchos
ENSORLG00020003827	hbs1l	100	70.056	ENSACAG00000010120	HBS1L	100	70.056	Anolis_carolinensis
ENSORLG00020003827	hbs1l	100	70.397	ENSANAG00000038076	HBS1L	96	77.190	Aotus_nancymaae
ENSORLG00020003827	hbs1l	100	84.353	ENSACLG00000010469	hbs1l	100	84.353	Astatotilapia_calliptera
ENSORLG00020003827	hbs1l	100	75.248	ENSAMXG00000004260	hbs1l	97	81.903	Astyanax_mexicanus
ENSORLG00020003827	hbs1l	100	70.538	ENSBTAG00000020174	HBS1L	100	69.915	Bos_taurus
ENSORLG00020003827	hbs1l	73	42.385	WBGene00010622	K07A12.4	87	43.429	Caenorhabditis_elegans
ENSORLG00020003827	hbs1l	100	70.397	ENSCJAG00000007678	HBS1L	95	77.148	Callithrix_jacchus
ENSORLG00020003827	hbs1l	100	69.590	ENSCAFG00000000226	HBS1L	100	69.590	Canis_familiaris
ENSORLG00020003827	hbs1l	100	69.590	ENSCAFG00020021904	HBS1L	100	69.590	Canis_lupus_dingo
ENSORLG00020003827	hbs1l	100	70.056	ENSCHIG00000010299	HBS1L	100	69.633	Capra_hircus
ENSORLG00020003827	hbs1l	100	69.405	ENSTSYG00000007089	HBS1L	100	72.315	Carlito_syrichta
ENSORLG00020003827	hbs1l	99	60.795	ENSCPOG00000007015	HBS1L	99	60.795	Cavia_porcellus
ENSORLG00020003827	hbs1l	100	69.263	ENSCCAG00000033863	HBS1L	100	71.799	Cebus_capucinus
ENSORLG00020003827	hbs1l	100	70.183	ENSCATG00000043042	HBS1L	100	69.846	Cercocebus_atys
ENSORLG00020003827	hbs1l	100	69.787	ENSCLAG00000004937	HBS1L	100	69.078	Chinchilla_lanigera
ENSORLG00020003827	hbs1l	100	69.803	ENSCSAG00000016791	HBS1L	100	69.468	Chlorocebus_sabaeus
ENSORLG00020003827	hbs1l	97	55.620	ENSCHOG00000001852	HBS1L	99	54.208	Choloepus_hoffmanni
ENSORLG00020003827	hbs1l	100	70.680	ENSCPBG00000017635	HBS1L	100	69.972	Chrysemys_picta_bellii
ENSORLG00020003827	hbs1l	99	47.880	ENSCING00000005592	-	99	47.059	Ciona_intestinalis
ENSORLG00020003827	hbs1l	99	47.245	ENSCSAVG00000002297	-	99	59.138	Ciona_savignyi
ENSORLG00020003827	hbs1l	100	70.126	ENSCANG00000031208	HBS1L	100	69.846	Colobus_angolensis_palliatus
ENSORLG00020003827	hbs1l	100	71.045	ENSCGRG00001024531	Hbs1l	100	70.339	Cricetulus_griseus_chok1gshd
ENSORLG00020003827	hbs1l	100	71.045	ENSCGRG00000017361	Hbs1l	100	70.339	Cricetulus_griseus_crigri
ENSORLG00020003827	hbs1l	99	83.073	ENSCSEG00000002794	hbs1l	94	83.073	Cynoglossus_semilaevis
ENSORLG00020003827	hbs1l	100	80.912	ENSCVAG00000001462	hbs1l	100	80.912	Cyprinodon_variegatus
ENSORLG00020003827	hbs1l	100	75.071	ENSDARG00000036778	hbs1l	100	75.212	Danio_rerio
ENSORLG00020003827	hbs1l	100	69.886	ENSDORG00000005958	Hbs1l	100	69.886	Dipodomys_ordii
ENSORLG00020003827	hbs1l	99	46.281	FBgn0042712	HBS1	100	46.556	Drosophila_melanogaster
ENSORLG00020003827	hbs1l	100	65.960	ENSETEG00000000913	HBS1L	100	65.113	Echinops_telfairi
ENSORLG00020003827	hbs1l	99	57.468	ENSEBUG00000010759	hbs1l	100	62.097	Eptatretus_burgeri
ENSORLG00020003827	hbs1l	100	68.724	ENSEASG00005011148	HBS1L	100	68.970	Equus_asinus_asinus
ENSORLG00020003827	hbs1l	100	69.492	ENSECAG00000004470	HBS1L	100	69.014	Equus_caballus
ENSORLG00020003827	hbs1l	100	67.089	ENSEEUG00000013582	HBS1L	100	66.948	Erinaceus_europaeus
ENSORLG00020003827	hbs1l	92	73.939	ENSELUG00000006444	hbs1l	95	73.506	Esox_lucius
ENSORLG00020003827	hbs1l	100	70.225	ENSFCAG00000001810	HBS1L	100	78.476	Felis_catus
ENSORLG00020003827	hbs1l	87	71.545	ENSFALG00000011898	HBS1L	100	71.545	Ficedula_albicollis
ENSORLG00020003827	hbs1l	100	70.538	ENSFDAG00000011841	HBS1L	100	70.113	Fukomys_damarensis
ENSORLG00020003827	hbs1l	100	82.764	ENSFHEG00000006942	hbs1l	100	82.764	Fundulus_heteroclitus
ENSORLG00020003827	hbs1l	99	75.249	ENSGMOG00000011843	hbs1l	100	75.249	Gadus_morhua
ENSORLG00020003827	hbs1l	100	80.727	ENSGALG00000013962	HBS1L	88	80.727	Gallus_gallus
ENSORLG00020003827	hbs1l	100	84.473	ENSGAFG00000004157	hbs1l	100	84.473	Gambusia_affinis
ENSORLG00020003827	hbs1l	99	80.512	ENSGACG00000011035	hbs1l	100	80.797	Gasterosteus_aculeatus
ENSORLG00020003827	hbs1l	100	69.873	ENSGAGG00000002033	HBS1L	100	68.883	Gopherus_agassizii
ENSORLG00020003827	hbs1l	78	72.432	ENSGGOG00000034956	-	93	80.645	Gorilla_gorilla
ENSORLG00020003827	hbs1l	100	84.495	ENSHBUG00000013424	hbs1l	100	84.495	Haplochromis_burtoni
ENSORLG00020003827	hbs1l	100	69.886	ENSHGLG00000000516	HBS1L	100	69.220	Heterocephalus_glaber_female
ENSORLG00020003827	hbs1l	100	69.886	ENSHGLG00100003550	HBS1L	100	69.220	Heterocephalus_glaber_male
ENSORLG00020003827	hbs1l	100	79.943	ENSHCOG00000007581	hbs1l	93	79.943	Hippocampus_comes
ENSORLG00020003827	hbs1l	100	75.142	ENSIPUG00000010748	hbs1l	100	74.574	Ictalurus_punctatus
ENSORLG00020003827	hbs1l	100	70.605	ENSSTOG00000007551	HBS1L	100	70.042	Ictidomys_tridecemlineatus
ENSORLG00020003827	hbs1l	99	67.280	ENSJJAG00000017024	-	97	67.139	Jaculus_jaculus
ENSORLG00020003827	hbs1l	100	54.816	ENSJJAG00000012660	-	100	54.391	Jaculus_jaculus
ENSORLG00020003827	hbs1l	100	84.758	ENSKMAG00000012130	hbs1l	100	86.264	Kryptolebias_marmoratus
ENSORLG00020003827	hbs1l	100	84.330	ENSLBEG00000002784	hbs1l	100	84.330	Labrus_bergylta
ENSORLG00020003827	hbs1l	69	75.714	ENSLACG00000004528	HBS1L	99	75.714	Latimeria_chalumnae
ENSORLG00020003827	hbs1l	100	71.269	ENSLOCG00000016221	hbs1l	100	71.269	Lepisosteus_oculatus
ENSORLG00020003827	hbs1l	100	67.327	ENSLAFG00000007835	HBS1L	100	67.468	Loxodonta_africana
ENSORLG00020003827	hbs1l	100	70.822	ENSMFAG00000003766	HBS1L	96	77.697	Macaca_fascicularis
ENSORLG00020003827	hbs1l	89	76.630	ENSMMUG00000004802	HBS1L	96	78.172	Macaca_mulatta
ENSORLG00020003827	hbs1l	100	70.822	ENSMNEG00000043942	HBS1L	96	77.697	Macaca_nemestrina
ENSORLG00020003827	hbs1l	99	70.056	ENSMLEG00000043218	HBS1L	93	76.503	Mandrillus_leucophaeus
ENSORLG00020003827	hbs1l	98	88.390	ENSMAMG00000016498	hbs1l	98	88.390	Mastacembelus_armatus
ENSORLG00020003827	hbs1l	77	87.918	ENSMZEG00005024018	-	90	87.918	Maylandia_zebra
ENSORLG00020003827	hbs1l	100	84.353	ENSMZEG00005015575	hbs1l	100	84.353	Maylandia_zebra
ENSORLG00020003827	hbs1l	99	67.847	ENSMGAG00000013065	HBS1L	99	66.714	Meleagris_gallopavo
ENSORLG00020003827	hbs1l	100	71.246	ENSMAUG00000001077	Hbs1l	100	70.763	Mesocricetus_auratus
ENSORLG00020003827	hbs1l	99	66.903	ENSMICG00000001533	-	91	75.596	Microcebus_murinus
ENSORLG00020003827	hbs1l	100	59.915	ENSMICG00000030043	-	96	79.032	Microcebus_murinus
ENSORLG00020003827	hbs1l	100	70.323	ENSMOCG00000023038	Hbs1l	100	69.846	Microtus_ochrogaster
ENSORLG00020003827	hbs1l	97	85.044	ENSMMOG00000015507	hbs1l	100	85.044	Mola_mola
ENSORLG00020003827	hbs1l	100	70.438	ENSMODG00000017499	HBS1L	100	70.438	Monodelphis_domestica
ENSORLG00020003827	hbs1l	100	85.206	ENSMALG00000010768	hbs1l	100	85.206	Monopterus_albus
ENSORLG00020003827	hbs1l	100	70.605	MGP_CAROLIEiJ_G0015162	Hbs1l	100	69.986	Mus_caroli
ENSORLG00020003827	hbs1l	100	70.945	ENSMUSG00000019977	Hbs1l	100	86.260	Mus_musculus
ENSORLG00020003827	hbs1l	100	70.183	MGP_PahariEiJ_G0023782	Hbs1l	100	69.565	Mus_pahari
ENSORLG00020003827	hbs1l	100	71.086	MGP_SPRETEiJ_G0015970	Hbs1l	100	70.464	Mus_spretus
ENSORLG00020003827	hbs1l	100	69.873	ENSMPUG00000014810	HBS1L	100	69.394	Mustela_putorius_furo
ENSORLG00020003827	hbs1l	100	70.113	ENSMLUG00000010618	HBS1L	100	69.633	Myotis_lucifugus
ENSORLG00020003827	hbs1l	100	68.980	ENSNGAG00000015184	Hbs1l	100	68.785	Nannospalax_galili
ENSORLG00020003827	hbs1l	100	84.353	ENSNBRG00000020095	hbs1l	99	88.268	Neolamprologus_brichardi
ENSORLG00020003827	hbs1l	100	69.915	ENSNLEG00000014721	HBS1L	100	69.577	Nomascus_leucogenys
ENSORLG00020003827	hbs1l	88	79.695	ENSMEUG00000003907	HBS1L	81	79.695	Notamacropus_eugenii
ENSORLG00020003827	hbs1l	71	79.339	ENSOPRG00000013595	HBS1L	70	79.339	Ochotona_princeps
ENSORLG00020003827	hbs1l	99	69.590	ENSODEG00000008959	HBS1L	100	69.496	Octodon_degus
ENSORLG00020003827	hbs1l	100	84.211	ENSONIG00000000460	hbs1l	100	83.734	Oreochromis_niloticus
ENSORLG00020003827	hbs1l	99	69.688	ENSOANG00000002684	-	99	69.263	Ornithorhynchus_anatinus
ENSORLG00020003827	hbs1l	100	66.667	ENSOCUG00000011619	HBS1L	99	67.670	Oryctolagus_cuniculus
ENSORLG00020003827	hbs1l	100	99.430	ENSORLG00000016559	hbs1l	100	99.430	Oryzias_latipes
ENSORLG00020003827	hbs1l	100	99.145	ENSORLG00015023105	hbs1l	100	99.145	Oryzias_latipes_hsok
ENSORLG00020003827	hbs1l	100	95.726	ENSOMEG00000016715	hbs1l	100	95.726	Oryzias_melastigma
ENSORLG00020003827	hbs1l	100	69.620	ENSOGAG00000012604	HBS1L	100	69.873	Otolemur_garnettii
ENSORLG00020003827	hbs1l	100	70.056	ENSOARG00000005671	-	100	69.492	Ovis_aries
ENSORLG00020003827	hbs1l	99	70.397	ENSOARG00000014798	-	99	69.830	Ovis_aries
ENSORLG00020003827	hbs1l	100	70.763	ENSPPAG00000029900	HBS1L	93	77.473	Pan_paniscus
ENSORLG00020003827	hbs1l	100	70.225	ENSPPRG00000005285	HBS1L	100	74.468	Panthera_pardus
ENSORLG00020003827	hbs1l	100	70.225	ENSPTIG00000015803	HBS1L	100	74.468	Panthera_tigris_altaica
ENSORLG00020003827	hbs1l	100	70.763	ENSPTRG00000018630	HBS1L	93	77.473	Pan_troglodytes
ENSORLG00020003827	hbs1l	100	70.183	ENSPANG00000007075	HBS1L	100	69.846	Papio_anubis
ENSORLG00020003827	hbs1l	97	79.174	ENSPKIG00000023171	hbs1l	97	79.174	Paramormyrops_kingsleyae
ENSORLG00020003827	hbs1l	86	68.078	ENSPSIG00000016467	HBS1L	97	67.590	Pelodiscus_sinensis
ENSORLG00020003827	hbs1l	99	78.398	ENSPMGG00000018051	hbs1l	96	86.702	Periophthalmus_magnuspinnatus
ENSORLG00020003827	hbs1l	100	70.480	ENSPEMG00000014369	Hbs1l	100	70.000	Peromyscus_maniculatus_bairdii
ENSORLG00020003827	hbs1l	100	62.376	ENSPMAG00000002516	hbs1l	100	61.669	Petromyzon_marinus
ENSORLG00020003827	hbs1l	100	84.233	ENSPFOG00000021764	hbs1l	100	84.233	Poecilia_formosa
ENSORLG00020003827	hbs1l	100	84.473	ENSPLAG00000006193	hbs1l	100	84.473	Poecilia_latipinna
ENSORLG00020003827	hbs1l	100	84.615	ENSPMEG00000000925	hbs1l	100	84.615	Poecilia_mexicana
ENSORLG00020003827	hbs1l	100	83.761	ENSPREG00000011270	hbs1l	100	83.761	Poecilia_reticulata
ENSORLG00020003827	hbs1l	100	70.056	ENSPPYG00000017027	HBS1L	100	69.718	Pongo_abelii
ENSORLG00020003827	hbs1l	75	77.966	ENSPCAG00000007002	HBS1L	77	77.966	Procavia_capensis
ENSORLG00020003827	hbs1l	84	76.236	ENSPVAG00000015229	HBS1L	84	76.038	Pteropus_vampyrus
ENSORLG00020003827	hbs1l	100	84.211	ENSPNYG00000013360	hbs1l	100	84.211	Pundamilia_nyererei
ENSORLG00020003827	hbs1l	100	74.574	ENSPNAG00000026721	hbs1l	100	74.858	Pygocentrus_nattereri
ENSORLG00020003827	hbs1l	100	70.621	ENSRNOG00000014531	Hbs1l	100	70.000	Rattus_norvegicus
ENSORLG00020003827	hbs1l	100	70.126	ENSRBIG00000004484	HBS1L	100	69.846	Rhinopithecus_bieti
ENSORLG00020003827	hbs1l	100	69.986	ENSRROG00000026176	HBS1L	100	69.705	Rhinopithecus_roxellana
ENSORLG00020003827	hbs1l	60	38.926	YKR084C	-	73	38.926	Saccharomyces_cerevisiae
ENSORLG00020003827	hbs1l	100	70.680	ENSSBOG00000019696	-	93	79.135	Saimiri_boliviensis_boliviensis
ENSORLG00020003827	hbs1l	100	62.748	ENSSBOG00000016930	-	98	76.596	Saimiri_boliviensis_boliviensis
ENSORLG00020003827	hbs1l	100	69.731	ENSSHAG00000013509	HBS1L	100	68.627	Sarcophilus_harrisii
ENSORLG00020003827	hbs1l	99	73.219	ENSSFOG00015017544	hbs1l	96	73.219	Scleropages_formosus
ENSORLG00020003827	hbs1l	100	81.223	ENSSMAG00000010621	hbs1l	100	81.650	Scophthalmus_maximus
ENSORLG00020003827	hbs1l	100	86.486	ENSSDUG00000012974	hbs1l	100	86.486	Seriola_dumerili
ENSORLG00020003827	hbs1l	100	85.917	ENSSLDG00000004960	hbs1l	99	88.683	Seriola_lalandi_dorsalis
ENSORLG00020003827	hbs1l	98	68.940	ENSSARG00000006747	HBS1L	100	69.376	Sorex_araneus
ENSORLG00020003827	hbs1l	99	68.369	ENSSPUG00000012389	HBS1L	99	67.989	Sphenodon_punctatus
ENSORLG00020003827	hbs1l	97	69.985	ENSSSCG00000004169	HBS1L	100	68.892	Sus_scrofa
ENSORLG00020003827	hbs1l	99	69.448	ENSTGUG00000011507	HBS1L	99	68.927	Taeniopygia_guttata
ENSORLG00020003827	hbs1l	99	79.915	ENSTRUG00000016128	hbs1l	99	79.772	Takifugu_rubripes
ENSORLG00020003827	hbs1l	99	80.171	ENSTNIG00000016320	hbs1l	99	80.171	Tetraodon_nigroviridis
ENSORLG00020003827	hbs1l	100	64.385	ENSTBEG00000009950	HBS1L	100	64.385	Tupaia_belangeri
ENSORLG00020003827	hbs1l	99	69.787	ENSTTRG00000003715	HBS1L	99	69.307	Tursiops_truncatus
ENSORLG00020003827	hbs1l	100	70.183	ENSUAMG00000001064	HBS1L	100	69.565	Ursus_americanus
ENSORLG00020003827	hbs1l	100	70.042	ENSUMAG00000024395	HBS1L	98	78.464	Ursus_maritimus
ENSORLG00020003827	hbs1l	86	80.075	ENSVPAG00000006280	HBS1L	84	80.075	Vicugna_pacos
ENSORLG00020003827	hbs1l	100	69.902	ENSVVUG00000000295	HBS1L	100	69.902	Vulpes_vulpes
ENSORLG00020003827	hbs1l	100	68.741	ENSXETG00000003726	hbs1l	100	68.741	Xenopus_tropicalis
ENSORLG00020003827	hbs1l	99	82.596	ENSXCOG00000005323	hbs1l	100	82.596	Xiphophorus_couchianus
ENSORLG00020003827	hbs1l	100	84.330	ENSXMAG00000004359	hbs1l	100	84.330	Xiphophorus_maculatus