EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020003991 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 29261 bases
Position: chr12:9703626-9732886
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020003210	AF-4	PF05110.13	1.5e-215	1	3
ENSORLP00020003210	AF-4	PF05110.13	1.5e-215	2	3
ENSORLP00020003210	AF-4	PF05110.13	1.5e-215	3	3
ENSORLP00020003184	AF-4	PF05110.13	7.2e-193	1	2
ENSORLP00020003184	AF-4	PF05110.13	7.2e-193	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020010049	-	4568	-	ENSORLP00020003184	965 (aa)	-	-
ENSORLT00020009992	-	3885	-	ENSORLP00020003210	927 (aa)	-	-

Gene Model

Click here to download ENSORLG00020003991's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020003991's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020003991	-	58	41.964	ENSORLG00020020601	aff4	54	41.964

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020003991	-	54	60.606	ENSG00000172493	AFF1	59	61.404	Homo_sapiens
ENSORLG00020003991	-	60	58.929	ENSG00000144218	AFF3	97	37.436	Homo_sapiens
ENSORLG00020003991	-	99	64.835	ENSAPOG00000002994	-	86	64.835	Acanthochromis_polyacanthus
ENSORLG00020003991	-	55	78.571	ENSACIG00000022732	aff2	61	57.407	Amphilophus_citrinellus
ENSORLG00020003991	-	71	64.789	ENSACIG00000021066	-	71	64.789	Amphilophus_citrinellus
ENSORLG00020003991	-	99	73.494	ENSAOCG00000020283	-	85	73.494	Amphiprion_ocellaris
ENSORLG00020003991	-	61	57.627	ENSAOCG00000008476	aff4	65	57.627	Amphiprion_ocellaris
ENSORLG00020003991	-	61	57.627	ENSAPEG00000018275	aff4	65	57.627	Amphiprion_percula
ENSORLG00020003991	-	99	71.084	ENSAPEG00000018794	-	85	71.084	Amphiprion_percula
ENSORLG00020003991	-	58	55.714	ENSATEG00000010963	aff4	65	55.714	Anabas_testudineus
ENSORLG00020003991	-	99	67.073	ENSATEG00000015552	-	84	67.073	Anabas_testudineus
ENSORLG00020003991	-	69	54.098	ENSACAG00000012192	AFF1	63	54.098	Anolis_carolinensis
ENSORLG00020003991	-	54	60.606	ENSANAG00000017095	AFF1	53	60.606	Aotus_nancymaae
ENSORLG00020003991	-	99	59.756	ENSACLG00000002905	-	87	59.756	Astatotilapia_calliptera
ENSORLG00020003991	-	56	60.606	ENSCJAG00000006047	AFF1	53	60.606	Callithrix_jacchus
ENSORLG00020003991	-	52	64.516	ENSCAFG00000009476	AFF1	67	64.516	Canis_familiaris
ENSORLG00020003991	-	61	56.250	ENSCAPG00000006540	AFF1	52	56.250	Cavia_aperea
ENSORLG00020003991	-	97	56.250	ENSCPOG00000034568	AFF1	81	56.250	Cavia_porcellus
ENSORLG00020003991	-	71	60.606	ENSCATG00000039501	AFF1	64	60.606	Cercocebus_atys
ENSORLG00020003991	-	90	50.649	ENSCLAG00000005537	AFF1	70	50.649	Chinchilla_lanigera
ENSORLG00020003991	-	55	60.606	ENSCANG00000037514	AFF1	58	60.606	Colobus_angolensis_palliatus
ENSORLG00020003991	-	67	39.147	ENSCGRG00001016680	Aff4	60	39.768	Cricetulus_griseus_chok1gshd
ENSORLG00020003991	-	53	53.571	ENSCGRG00000003408	Aff3	55	53.571	Cricetulus_griseus_crigri
ENSORLG00020003991	-	64	57.627	ENSCSEG00000017002	aff4	62	57.627	Cynoglossus_semilaevis
ENSORLG00020003991	-	65	48.148	ENSCVAG00000005218	aff4	62	35.230	Cyprinodon_variegatus
ENSORLG00020003991	-	99	59.259	ENSCVAG00000015626	-	84	65.432	Cyprinodon_variegatus
ENSORLG00020003991	-	50	58.929	ENSDORG00000007294	Aff3	55	58.929	Dipodomys_ordii
ENSORLG00020003991	-	99	37.553	ENSELUG00000019953	-	94	50.000	Esox_lucius
ENSORLG00020003991	-	57	56.140	ENSELUG00000023871	aff4	52	57.143	Esox_lucius
ENSORLG00020003991	-	74	59.322	ENSFHEG00000004526	aff4	61	34.061	Fundulus_heteroclitus
ENSORLG00020003991	-	50	64.286	ENSFHEG00000022097	aff2	51	64.286	Fundulus_heteroclitus
ENSORLG00020003991	-	74	67.073	ENSFHEG00000003521	-	81	67.073	Fundulus_heteroclitus
ENSORLG00020003991	-	63	42.857	ENSGMOG00000008803	aff4	60	32.903	Gadus_morhua
ENSORLG00020003991	-	59	66.667	ENSGALG00000043935	AFF1	53	66.667	Gallus_gallus
ENSORLG00020003991	-	99	67.123	ENSGACG00000016333	-	87	66.265	Gasterosteus_aculeatus
ENSORLG00020003991	-	65	57.895	ENSGAGG00000020214	AFF4	59	57.895	Gopherus_agassizii
ENSORLG00020003991	-	99	59.756	ENSHBUG00000005828	-	84	59.756	Haplochromis_burtoni
ENSORLG00020003991	-	98	72.857	ENSHCOG00000000539	-	83	72.857	Hippocampus_comes
ENSORLG00020003991	-	65	42.202	ENSSTOG00000026695	AFF4	87	39.623	Ictidomys_tridecemlineatus
ENSORLG00020003991	-	66	40.000	ENSJJAG00000000912	Aff4	57	38.644	Jaculus_jaculus
ENSORLG00020003991	-	99	75.342	ENSKMAG00000013113	-	84	75.342	Kryptolebias_marmoratus
ENSORLG00020003991	-	99	62.195	ENSLBEG00000016928	-	86	62.195	Labrus_bergylta
ENSORLG00020003991	-	61	56.667	ENSLBEG00000017778	aff4	72	36.774	Labrus_bergylta
ENSORLG00020003991	-	91	35.683	ENSLOCG00000004025	AFF1	86	34.483	Lepisosteus_oculatus
ENSORLG00020003991	-	63	54.386	ENSLAFG00000010555	AFF4	52	54.386	Loxodonta_africana
ENSORLG00020003991	-	99	63.636	ENSMAMG00000016189	-	83	63.636	Mastacembelus_armatus
ENSORLG00020003991	-	99	59.756	ENSMZEG00005020442	-	83	59.756	Maylandia_zebra
ENSORLG00020003991	-	97	67.857	ENSMGAG00000007646	AFF1	52	67.857	Meleagris_gallopavo
ENSORLG00020003991	-	67	38.760	ENSMAUG00000013669	Aff4	64	39.927	Mesocricetus_auratus
ENSORLG00020003991	-	67	38.760	ENSMOCG00000003884	Aff4	61	40.996	Microtus_ochrogaster
ENSORLG00020003991	-	65	60.714	ENSMOCG00000017389	Aff1	61	60.714	Microtus_ochrogaster
ENSORLG00020003991	-	86	62.500	ENSMODG00000020745	AFF1	70	62.500	Monodelphis_domestica
ENSORLG00020003991	-	99	69.512	ENSMALG00000002436	-	84	69.512	Monopterus_albus
ENSORLG00020003991	-	57	57.627	ENSMALG00000017690	aff4	65	57.627	Monopterus_albus
ENSORLG00020003991	-	74	47.500	ENSNGAG00000019867	Aff4	50	47.500	Nannospalax_galili
ENSORLG00020003991	-	94	59.756	ENSONIG00000007636	-	84	59.756	Oreochromis_niloticus
ENSORLG00020003991	-	66	62.121	ENSOANG00000013624	AFF1	64	62.121	Ornithorhynchus_anatinus
ENSORLG00020003991	-	58	41.964	ENSORLG00000001361	aff4	54	41.964	Oryzias_latipes
ENSORLG00020003991	-	83	98.446	ENSORLG00000006428	-	99	98.446	Oryzias_latipes
ENSORLG00020003991	-	58	41.964	ENSORLG00015004684	aff4	54	41.964	Oryzias_latipes_hsok
ENSORLG00020003991	-	100	98.382	ENSORLG00015009287	-	100	98.382	Oryzias_latipes_hsok
ENSORLG00020003991	-	99	81.197	ENSOMEG00000005799	-	99	81.410	Oryzias_melastigma
ENSORLG00020003991	-	59	43.750	ENSOMEG00000005078	aff4	54	43.750	Oryzias_melastigma
ENSORLG00020003991	-	65	41.732	ENSPKIG00000024325	AFF4	50	35.398	Paramormyrops_kingsleyae
ENSORLG00020003991	-	86	63.636	ENSPKIG00000007777	-	70	63.636	Paramormyrops_kingsleyae
ENSORLG00020003991	-	73	38.211	ENSPEMG00000007995	Aff4	64	38.217	Peromyscus_maniculatus_bairdii
ENSORLG00020003991	-	72	51.220	ENSPEMG00000000785	Aff1	63	51.220	Peromyscus_maniculatus_bairdii
ENSORLG00020003991	-	65	57.143	ENSPFOG00000007079	aff4	61	34.375	Poecilia_formosa
ENSORLG00020003991	-	99	64.634	ENSPFOG00000004581	-	84	64.634	Poecilia_formosa
ENSORLG00020003991	-	99	45.648	ENSPLAG00000012910	-	92	45.749	Poecilia_latipinna
ENSORLG00020003991	-	62	49.123	ENSPLAG00000005101	aff2	52	64.286	Poecilia_latipinna
ENSORLG00020003991	-	64	59.322	ENSPLAG00000001837	aff4	61	34.152	Poecilia_latipinna
ENSORLG00020003991	-	71	45.797	ENSPMEG00000020100	-	97	44.926	Poecilia_mexicana
ENSORLG00020003991	-	64	58.333	ENSPMEG00000005613	aff4	61	34.152	Poecilia_mexicana
ENSORLG00020003991	-	62	58.333	ENSPREG00000005287	aff4	61	34.607	Poecilia_reticulata
ENSORLG00020003991	-	99	67.073	ENSPREG00000003514	-	84	67.073	Poecilia_reticulata
ENSORLG00020003991	-	54	40.164	ENSRNOG00000006965	Aff4	57	38.217	Rattus_norvegicus
ENSORLG00020003991	-	53	62.295	ENSRNOG00000002232	Aff1	61	62.295	Rattus_norvegicus
ENSORLG00020003991	-	55	61.404	ENSRROG00000045716	AFF1	61	61.404	Rhinopithecus_roxellana
ENSORLG00020003991	-	65	57.895	ENSSHAG00000013198	AFF4	55	57.895	Sarcophilus_harrisii
ENSORLG00020003991	-	97	60.606	ENSSHAG00000004203	AFF1	50	60.606	Sarcophilus_harrisii
ENSORLG00020003991	-	62	56.140	ENSSFOG00015018646	aff4	54	41.085	Scleropages_formosus
ENSORLG00020003991	-	50	57.627	ENSSMAG00000004734	aff4	62	33.333	Scophthalmus_maximus
ENSORLG00020003991	-	99	66.667	ENSSMAG00000007062	-	83	66.667	Scophthalmus_maximus
ENSORLG00020003991	-	70	45.787	ENSSDUG00000023775	-	97	46.208	Seriola_dumerili
ENSORLG00020003991	-	99	62.637	ENSSLDG00000006836	-	84	62.637	Seriola_lalandi_dorsalis
ENSORLG00020003991	-	96	54.887	ENSSPAG00000003972	-	87	54.887	Stegastes_partitus
ENSORLG00020003991	-	71	64.179	ENSSSCG00000023593	AFF1	63	64.179	Sus_scrofa
ENSORLG00020003991	-	99	78.261	ENSTRUG00000014005	-	83	78.261	Takifugu_rubripes
ENSORLG00020003991	-	63	54.412	ENSTRUG00000008087	aff4	59	33.040	Takifugu_rubripes
ENSORLG00020003991	-	99	63.889	ENSTNIG00000007537	-	85	63.889	Tetraodon_nigroviridis
ENSORLG00020003991	-	65	42.857	ENSVPAG00000007247	AFF4	51	42.857	Vicugna_pacos
ENSORLG00020003991	-	66	62.500	ENSXETG00000019955	aff1	58	62.500	Xenopus_tropicalis
ENSORLG00020003991	-	74	55.738	ENSXMAG00000001642	aff4	68	57.377	Xiphophorus_maculatus
ENSORLG00020003991	-	99	65.854	ENSXMAG00000004657	-	85	65.854	Xiphophorus_maculatus