EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020004063 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 4543 bases
Position: chr17:4044427-4048969
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020003270	RVT_1	PF00078.27	2.2e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020009887	-	813	-	ENSORLP00020003270	270 (aa)	-	-

Gene Model

Click here to download ENSORLG00020004063's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020004063's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020004063	-	64	35.526	ENSORLG00020007779	-	61	35.526
ENSORLG00020004063	-	90	34.628	ENSORLG00020014149	-	93	34.628
ENSORLG00020004063	-	60	39.815	ENSORLG00020017190	-	50	39.815
ENSORLG00020004063	-	63	35.426	ENSORLG00020018629	-	59	35.426
ENSORLG00020004063	-	66	37.500	ENSORLG00020007002	-	91	37.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020004063	-	82	44.251	ENSACIG00000010538	-	75	44.251	Amphilophus_citrinellus
ENSORLG00020004063	-	77	33.091	ENSAOCG00000014605	-	58	33.091	Amphiprion_ocellaris
ENSORLG00020004063	-	76	32.824	ENSAOCG00000000894	-	80	32.353	Amphiprion_ocellaris
ENSORLG00020004063	-	76	30.657	ENSAOCG00000012592	-	64	30.657	Amphiprion_ocellaris
ENSORLG00020004063	-	80	32.624	ENSAOCG00000019069	-	77	32.624	Amphiprion_ocellaris
ENSORLG00020004063	-	61	32.407	ENSACAG00000010816	-	61	32.407	Anolis_carolinensis
ENSORLG00020004063	-	82	33.449	ENSACLG00000013571	-	71	33.449	Astatotilapia_calliptera
ENSORLG00020004063	-	84	35.034	ENSACLG00000012857	-	79	35.034	Astatotilapia_calliptera
ENSORLG00020004063	-	63	33.778	ENSAMXG00000041014	-	85	33.778	Astyanax_mexicanus
ENSORLG00020004063	-	63	31.839	ENSAMXG00000040763	-	57	31.839	Astyanax_mexicanus
ENSORLG00020004063	-	76	35.897	ENSCVAG00000020933	-	58	35.897	Cyprinodon_variegatus
ENSORLG00020004063	-	89	31.169	ENSCVAG00000018360	-	74	31.169	Cyprinodon_variegatus
ENSORLG00020004063	-	84	32.819	ENSELUG00000014378	-	69	32.819	Esox_lucius
ENSORLG00020004063	-	69	30.702	ENSHBUG00000011715	-	59	30.702	Haplochromis_burtoni
ENSORLG00020004063	-	77	40.996	ENSLBEG00000020242	-	71	40.996	Labrus_bergylta
ENSORLG00020004063	-	74	32.800	ENSLBEG00000004148	-	54	32.800	Labrus_bergylta
ENSORLG00020004063	-	73	34.177	ENSLBEG00000023714	-	66	34.177	Labrus_bergylta
ENSORLG00020004063	-	84	31.293	ENSMZEG00005017030	-	56	31.293	Maylandia_zebra
ENSORLG00020004063	-	84	31.293	ENSMZEG00005011529	-	55	31.293	Maylandia_zebra
ENSORLG00020004063	-	76	30.888	ENSMZEG00005016362	-	91	30.888	Maylandia_zebra
ENSORLG00020004063	-	80	30.249	ENSNBRG00000000972	-	70	30.249	Neolamprologus_brichardi
ENSORLG00020004063	-	60	41.860	ENSNBRG00000013792	-	63	41.860	Neolamprologus_brichardi
ENSORLG00020004063	-	82	32.404	ENSNBRG00000012595	-	65	32.404	Neolamprologus_brichardi
ENSORLG00020004063	-	88	30.496	ENSORLG00000024464	-	50	30.496	Oryzias_latipes
ENSORLG00020004063	-	79	31.560	ENSORLG00000023713	-	72	31.560	Oryzias_latipes
ENSORLG00020004063	-	90	33.442	ENSORLG00000024236	-	79	33.442	Oryzias_latipes
ENSORLG00020004063	-	82	32.404	ENSORLG00000028454	-	91	32.404	Oryzias_latipes
ENSORLG00020004063	-	67	36.179	ENSORLG00015021848	-	81	36.179	Oryzias_latipes_hsok
ENSORLG00020004063	-	67	41.057	ENSORLG00015008227	-	68	41.057	Oryzias_latipes_hsok
ENSORLG00020004063	-	66	35.776	ENSORLG00015007703	-	60	35.776	Oryzias_latipes_hsok
ENSORLG00020004063	-	88	34.211	ENSORLG00015022393	-	99	34.211	Oryzias_latipes_hsok
ENSORLG00020004063	-	80	45.583	ENSORLG00015020895	-	75	45.583	Oryzias_latipes_hsok
ENSORLG00020004063	-	76	31.200	ENSOMEG00000013211	-	61	31.200	Oryzias_melastigma
ENSORLG00020004063	-	81	30.888	ENSPMGG00000014421	-	68	30.888	Periophthalmus_magnuspinnatus
ENSORLG00020004063	-	80	37.456	ENSPREG00000001352	-	79	37.456	Poecilia_reticulata
ENSORLG00020004063	-	78	30.545	ENSPREG00000010319	-	66	30.545	Poecilia_reticulata
ENSORLG00020004063	-	84	31.802	ENSPREG00000006501	-	51	31.802	Poecilia_reticulata
ENSORLG00020004063	-	83	35.762	ENSPNYG00000023697	-	70	35.762	Pundamilia_nyererei
ENSORLG00020004063	-	75	44.141	ENSPNYG00000002466	-	85	44.141	Pundamilia_nyererei
ENSORLG00020004063	-	81	31.120	ENSPNAG00000024211	-	59	31.120	Pygocentrus_nattereri
ENSORLG00020004063	-	80	40.989	ENSPNAG00000024749	-	66	40.989	Pygocentrus_nattereri
ENSORLG00020004063	-	68	32.227	ENSPNAG00000010342	-	77	32.227	Pygocentrus_nattereri
ENSORLG00020004063	-	67	31.915	ENSPNAG00000014375	-	57	31.915	Pygocentrus_nattereri
ENSORLG00020004063	-	70	31.250	ENSSDUG00000015364	-	52	31.250	Seriola_dumerili
ENSORLG00020004063	-	77	34.221	ENSSDUG00000021791	-	88	34.221	Seriola_dumerili
ENSORLG00020004063	-	84	31.507	ENSSPUG00000015446	-	66	31.507	Sphenodon_punctatus
ENSORLG00020004063	-	81	38.828	ENSXCOG00000016894	-	81	38.828	Xiphophorus_couchianus
ENSORLG00020004063	-	81	32.042	ENSXMAG00000026184	-	95	32.042	Xiphophorus_maculatus