EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020004138 (Gene tree)
Gene ID: -
Gene Symbol: chd2
Alias: -
Full Name: chromodomain helicase DNA binding protein 2
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 15289 bases
Position: chr6:15917913-15933201
Accession: ZDB-GENE-050419-256
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020003350	ResIII	PF04851.15	1.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020009762	-	6882	-	ENSORLP00020003350	1813 (aa)	-	-

Gene Model

Click here to download ENSORLG00020004138's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020004138's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020004138	chd2	100	70.699	ENSG00000173575	CHD2	87	97.959	Homo_sapiens
ENSORLG00020004138	chd2	100	90.719	ENSAPOG00000008913	chd2	100	90.500	Acanthochromis_polyacanthus
ENSORLG00020004138	chd2	64	74.638	ENSAMEG00000010805	-	93	77.036	Ailuropoda_melanoleuca
ENSORLG00020004138	chd2	100	87.899	ENSAOCG00000016332	chd2	100	87.734	Amphiprion_ocellaris
ENSORLG00020004138	chd2	100	90.979	ENSAPEG00000016676	chd2	100	90.704	Amphiprion_percula
ENSORLG00020004138	chd2	100	89.780	ENSATEG00000005246	chd2	100	89.780	Anabas_testudineus
ENSORLG00020004138	chd2	99	71.077	ENSAPLG00000011141	-	99	70.913	Anas_platyrhynchos
ENSORLG00020004138	chd2	97	69.303	ENSACAG00000000088	-	95	69.881	Anolis_carolinensis
ENSORLG00020004138	chd2	100	70.683	ENSANAG00000024017	-	96	72.200	Aotus_nancymaae
ENSORLG00020004138	chd2	98	83.371	ENSACLG00000021370	chd2	98	95.181	Astatotilapia_calliptera
ENSORLG00020004138	chd2	100	70.576	ENSCJAG00000020444	-	96	72.088	Callithrix_jacchus
ENSORLG00020004138	chd2	99	71.289	ENSCAFG00000010998	CHD2	94	75.833	Canis_familiaris
ENSORLG00020004138	chd2	99	70.207	ENSCHIG00000022261	-	96	71.035	Capra_hircus
ENSORLG00020004138	chd2	100	71.114	ENSTSYG00000003272	-	95	73.798	Carlito_syrichta
ENSORLG00020004138	chd2	93	74.407	ENSCPOG00000005800	-	95	76.950	Cavia_porcellus
ENSORLG00020004138	chd2	100	70.737	ENSCCAG00000035304	-	96	72.257	Cebus_capucinus
ENSORLG00020004138	chd2	100	70.591	ENSCATG00000031069	-	96	72.047	Cercocebus_atys
ENSORLG00020004138	chd2	100	70.753	ENSCLAG00000016269	-	96	71.822	Chinchilla_lanigera
ENSORLG00020004138	chd2	100	70.645	ENSCSAG00000017007	-	96	72.103	Chlorocebus_sabaeus
ENSORLG00020004138	chd2	78	73.068	ENSCHOG00000000608	-	75	80.706	Choloepus_hoffmanni
ENSORLG00020004138	chd2	79	75.946	ENSCPBG00000018049	-	94	85.556	Chrysemys_picta_bellii
ENSORLG00020004138	chd2	74	52.632	ENSCSAVG00000007580	-	93	57.966	Ciona_savignyi
ENSORLG00020004138	chd2	100	70.645	ENSCANG00000038126	-	96	72.103	Colobus_angolensis_palliatus
ENSORLG00020004138	chd2	100	71.275	ENSCGRG00001006649	Chd2	96	71.975	Cricetulus_griseus_chok1gshd
ENSORLG00020004138	chd2	100	71.275	ENSCGRG00000018154	Chd2	96	71.975	Cricetulus_griseus_crigri
ENSORLG00020004138	chd2	98	75.434	ENSCSEG00000003646	chd2	95	92.771	Cynoglossus_semilaevis
ENSORLG00020004138	chd2	100	79.208	ENSCVAG00000002427	chd2	100	79.923	Cyprinodon_variegatus
ENSORLG00020004138	chd2	100	80.218	ENSDARG00000060687	chd2	100	80.972	Danio_rerio
ENSORLG00020004138	chd2	99	70.968	ENSDNOG00000009796	-	96	72.063	Dasypus_novemcinctus
ENSORLG00020004138	chd2	54	70.528	ENSEBUG00000014994	chd2	85	69.975	Eptatretus_burgeri
ENSORLG00020004138	chd2	99	71.196	ENSEASG00005015526	-	97	81.818	Equus_asinus_asinus
ENSORLG00020004138	chd2	100	81.148	ENSELUG00000017981	chd2	96	92.593	Esox_lucius
ENSORLG00020004138	chd2	95	72.629	ENSFALG00000010369	-	99	71.670	Ficedula_albicollis
ENSORLG00020004138	chd2	100	70.753	ENSFDAG00000020651	-	96	71.822	Fukomys_damarensis
ENSORLG00020004138	chd2	96	89.000	ENSFHEG00000002119	chd2	100	89.000	Fundulus_heteroclitus
ENSORLG00020004138	chd2	95	81.944	ENSGMOG00000002890	chd2	99	82.118	Gadus_morhua
ENSORLG00020004138	chd2	99	71.538	ENSGALG00000006949	CHD2	99	71.429	Gallus_gallus
ENSORLG00020004138	chd2	90	87.217	ENSGAFG00000001905	chd2	97	87.095	Gambusia_affinis
ENSORLG00020004138	chd2	95	86.833	ENSGACG00000013246	chd2	99	86.891	Gasterosteus_aculeatus
ENSORLG00020004138	chd2	78	78.114	ENSGAGG00000013176	-	95	86.517	Gopherus_agassizii
ENSORLG00020004138	chd2	100	69.769	ENSGGOG00000015677	CHD2	96	71.187	Gorilla_gorilla
ENSORLG00020004138	chd2	100	89.317	ENSHBUG00000017947	chd2	98	95.181	Haplochromis_burtoni
ENSORLG00020004138	chd2	100	70.806	ENSHGLG00000004435	CHD2	96	71.766	Heterocephalus_glaber_female
ENSORLG00020004138	chd2	100	70.484	ENSHGLG00100016376	-	96	71.372	Heterocephalus_glaber_male
ENSORLG00020004138	chd2	93	82.724	ENSHCOG00000008855	chd2	92	85.417	Hippocampus_comes
ENSORLG00020004138	chd2	73	80.572	ENSIPUG00000000488	chd2	98	76.800	Ictalurus_punctatus
ENSORLG00020004138	chd2	100	70.968	ENSSTOG00000001270	-	96	72.103	Ictidomys_tridecemlineatus
ENSORLG00020004138	chd2	100	70.360	ENSJJAG00000000213	Chd2	96	71.919	Jaculus_jaculus
ENSORLG00020004138	chd2	82	88.212	ENSKMAG00000015849	chd2	99	88.480	Kryptolebias_marmoratus
ENSORLG00020004138	chd2	73	75.789	ENSLAFG00000016885	-	98	80.969	Loxodonta_africana
ENSORLG00020004138	chd2	100	70.645	ENSMFAG00000033343	-	96	72.103	Macaca_fascicularis
ENSORLG00020004138	chd2	100	70.645	ENSMMUG00000011782	-	96	72.103	Macaca_mulatta
ENSORLG00020004138	chd2	100	70.408	ENSMNEG00000036875	-	96	71.854	Macaca_nemestrina
ENSORLG00020004138	chd2	100	70.645	ENSMLEG00000035026	-	96	72.103	Mandrillus_leucophaeus
ENSORLG00020004138	chd2	100	90.099	ENSMAMG00000009082	chd2	100	90.099	Mastacembelus_armatus
ENSORLG00020004138	chd2	98	83.371	ENSMZEG00005021333	chd2	98	95.181	Maylandia_zebra
ENSORLG00020004138	chd2	98	71.610	ENSMGAG00000008966	-	96	72.175	Meleagris_gallopavo
ENSORLG00020004138	chd2	99	70.364	ENSMICG00000000332	-	96	71.187	Microcebus_murinus
ENSORLG00020004138	chd2	100	71.022	ENSMOCG00000015124	Chd2	96	71.991	Microtus_ochrogaster
ENSORLG00020004138	chd2	99	72.465	ENSMODG00000013158	-	95	73.193	Monodelphis_domestica
ENSORLG00020004138	chd2	98	85.690	ENSMALG00000007755	chd2	96	92.771	Monopterus_albus
ENSORLG00020004138	chd2	100	71.367	MGP_CAROLIEiJ_G0029860	Chd2	96	72.185	Mus_caroli
ENSORLG00020004138	chd2	100	70.952	ENSMUSG00000078671	Chd2	96	72.200	Mus_musculus
ENSORLG00020004138	chd2	100	71.259	MGP_PahariEiJ_G0013082	Chd2	96	72.016	Mus_pahari
ENSORLG00020004138	chd2	100	71.329	MGP_SPRETEiJ_G0030962	Chd2	96	72.144	Mus_spretus
ENSORLG00020004138	chd2	100	71.114	ENSMPUG00000017577	-	96	72.032	Mustela_putorius_furo
ENSORLG00020004138	chd2	100	70.101	ENSMLUG00000009292	-	96	71.468	Myotis_lucifugus
ENSORLG00020004138	chd2	100	70.898	ENSNGAG00000010792	Chd2	96	71.975	Nannospalax_galili
ENSORLG00020004138	chd2	98	86.189	ENSNBRG00000020591	chd2	97	95.181	Neolamprologus_brichardi
ENSORLG00020004138	chd2	100	68.871	ENSNLEG00000012349	-	96	70.191	Nomascus_leucogenys
ENSORLG00020004138	chd2	72	78.026	ENSMEUG00000001522	-	68	79.592	Notamacropus_eugenii
ENSORLG00020004138	chd2	100	70.323	ENSODEG00000016028	-	96	71.429	Octodon_degus
ENSORLG00020004138	chd2	100	89.152	ENSONIG00000015136	chd2	100	90.363	Oreochromis_niloticus
ENSORLG00020004138	chd2	85	69.501	ENSOANG00000004385	-	98	69.158	Ornithorhynchus_anatinus
ENSORLG00020004138	chd2	100	66.594	ENSOCUG00000001628	-	92	77.732	Oryctolagus_cuniculus
ENSORLG00020004138	chd2	100	99.504	ENSORLG00000008403	chd2	100	99.504	Oryzias_latipes
ENSORLG00020004138	chd2	100	88.277	ENSOMEG00000005831	chd2	100	87.892	Oryzias_melastigma
ENSORLG00020004138	chd2	100	69.247	ENSOGAG00000010399	-	96	70.304	Otolemur_garnettii
ENSORLG00020004138	chd2	100	70.000	ENSOARG00000010343	-	95	71.773	Ovis_aries
ENSORLG00020004138	chd2	100	69.790	ENSPPAG00000030381	-	96	71.613	Pan_paniscus
ENSORLG00020004138	chd2	100	70.645	ENSPTRG00000007478	CHD2	96	72.103	Pan_troglodytes
ENSORLG00020004138	chd2	100	67.957	ENSPANG00000033355	-	96	69.291	Papio_anubis
ENSORLG00020004138	chd2	100	80.997	ENSPKIG00000000495	chd2	100	80.778	Paramormyrops_kingsleyae
ENSORLG00020004138	chd2	83	83.377	ENSPMGG00000009941	chd2	99	83.300	Periophthalmus_magnuspinnatus
ENSORLG00020004138	chd2	100	71.167	ENSPEMG00000019507	Chd2	96	71.919	Peromyscus_maniculatus_bairdii
ENSORLG00020004138	chd2	90	74.023	ENSPCIG00000009417	-	99	76.285	Phascolarctos_cinereus
ENSORLG00020004138	chd2	100	88.051	ENSPFOG00000007050	chd2	100	89.317	Poecilia_formosa
ENSORLG00020004138	chd2	100	88.271	ENSPLAG00000005067	chd2	100	89.317	Poecilia_latipinna
ENSORLG00020004138	chd2	100	88.106	ENSPMEG00000019628	chd2	100	89.372	Poecilia_mexicana
ENSORLG00020004138	chd2	100	69.409	ENSPPYG00000006799	-	96	70.922	Pongo_abelii
ENSORLG00020004138	chd2	100	70.914	ENSPCOG00000028084	-	96	71.991	Propithecus_coquereli
ENSORLG00020004138	chd2	98	83.258	ENSPNYG00000010273	chd2	98	95.181	Pundamilia_nyererei
ENSORLG00020004138	chd2	99	74.169	ENSPNAG00000016719	chd2	96	75.813	Pygocentrus_nattereri
ENSORLG00020004138	chd2	100	71.329	ENSRNOG00000012716	Chd2	96	72.144	Rattus_norvegicus
ENSORLG00020004138	chd2	100	69.338	ENSRBIG00000036875	-	96	70.152	Rhinopithecus_bieti
ENSORLG00020004138	chd2	100	70.699	ENSRROG00000041087	-	96	72.160	Rhinopithecus_roxellana
ENSORLG00020004138	chd2	100	70.683	ENSSBOG00000023754	-	96	72.200	Saimiri_boliviensis_boliviensis
ENSORLG00020004138	chd2	99	72.519	ENSSHAG00000012513	-	95	73.250	Sarcophilus_harrisii
ENSORLG00020004138	chd2	100	82.106	ENSSFOG00015023759	chd2	100	80.469	Scleropages_formosus
ENSORLG00020004138	chd2	100	88.999	ENSSMAG00000001726	chd2	100	88.889	Scophthalmus_maximus
ENSORLG00020004138	chd2	98	86.584	ENSSLDG00000001146	chd2	98	93.976	Seriola_lalandi_dorsalis
ENSORLG00020004138	chd2	76	81.667	ENSSARG00000014112	-	74	81.667	Sorex_araneus
ENSORLG00020004138	chd2	99	67.941	ENSSPUG00000011266	-	94	79.592	Sphenodon_punctatus
ENSORLG00020004138	chd2	98	86.640	ENSSPAG00000016452	chd2	97	95.181	Stegastes_partitus
ENSORLG00020004138	chd2	100	70.914	ENSSSCG00000002266	-	100	73.807	Sus_scrofa
ENSORLG00020004138	chd2	95	72.345	ENSTGUG00000008540	-	99	71.561	Taeniopygia_guttata
ENSORLG00020004138	chd2	88	82.682	ENSTRUG00000008842	chd2	91	82.161	Takifugu_rubripes
ENSORLG00020004138	chd2	87	87.481	ENSTNIG00000010760	chd2	96	86.515	Tetraodon_nigroviridis
ENSORLG00020004138	chd2	73	70.485	ENSTBEG00000017730	-	78	70.485	Tupaia_belangeri
ENSORLG00020004138	chd2	90	73.715	ENSTTRG00000000430	-	90	73.988	Tursiops_truncatus
ENSORLG00020004138	chd2	100	69.563	ENSUMAG00000000083	-	96	70.582	Ursus_maritimus
ENSORLG00020004138	chd2	84	86.799	ENSVPAG00000009645	-	81	86.799	Vicugna_pacos
ENSORLG00020004138	chd2	89	67.463	ENSXETG00000024129	chd2	99	66.228	Xenopus_tropicalis
ENSORLG00020004138	chd2	96	86.491	ENSXCOG00000020255	chd2	99	87.952	Xiphophorus_couchianus
ENSORLG00020004138	chd2	100	87.727	ENSXMAG00000002707	chd2	100	89.048	Xiphophorus_maculatus