EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020004200 (Gene tree)
Gene ID: -
Gene Symbol: lyn
Alias: -
Full Name: LYN proto-oncogene%2C Src family tyrosine kinase
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 18992 bases
Position: chr17:3939224-3958215
Accession: ZDB-GENE-040912-7
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020003400	Methyltransf_15	PF09445.10	3.4e-40	1	1
ENSORLP00020023372	Methyltransf_15	PF09445.10	3.4e-40	1	1
ENSORLP00020023399	Methyltransf_15	PF09445.10	3.7e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020009722	-	3850	-	ENSORLP00020023372	840 (aa)	-	-
ENSORLT00020009657	-	4760	-	ENSORLP00020023399	881 (aa)	-	-
ENSORLT00020009686	-	3841	-	ENSORLP00020003400	837 (aa)	-	-

Gene Model

Click here to download ENSORLG00020004200's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020004200's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020004200	lyn	93	34.413	ENSG00000137574	TGS1	63	74.419	Homo_sapiens
ENSORLG00020004200	lyn	64	51.394	ENSAPOG00000004321	-	99	50.609	Acanthochromis_polyacanthus
ENSORLG00020004200	lyn	96	50.528	ENSAOCG00000022799	lyn	100	49.020	Amphiprion_ocellaris
ENSORLG00020004200	lyn	75	54.370	ENSAPEG00000019723	TGS1	96	53.994	Amphiprion_percula
ENSORLG00020004200	lyn	93	45.618	ENSATEG00000005927	lyn	95	45.629	Anabas_testudineus
ENSORLG00020004200	lyn	91	44.294	ENSACAG00000017988	TGS1	83	42.885	Anolis_carolinensis
ENSORLG00020004200	lyn	96	47.143	ENSACLG00000000261	lyn	99	46.690	Astatotilapia_calliptera
ENSORLG00020004200	lyn	93	44.913	ENSAMXG00000014086	lyn	97	43.836	Astyanax_mexicanus
ENSORLG00020004200	lyn	93	37.037	ENSCPOG00000009713	TGS1	76	40.290	Cavia_porcellus
ENSORLG00020004200	lyn	96	35.183	ENSCCAG00000030476	TGS1	63	72.851	Cebus_capucinus
ENSORLG00020004200	lyn	83	44.915	ENSCPBG00000004958	TGS1	58	48.571	Chrysemys_picta_bellii
ENSORLG00020004200	lyn	96	44.656	ENSDARG00000107511	lyn	99	80.663	Danio_rerio
ENSORLG00020004200	lyn	78	72.072	ENSDNOG00000008353	TGS1	64	72.072	Dasypus_novemcinctus
ENSORLG00020004200	lyn	96	42.807	ENSELUG00000012537	lyn	60	31.499	Esox_lucius
ENSORLG00020004200	lyn	75	42.023	ENSFALG00000010249	TGS1	86	40.890	Ficedula_albicollis
ENSORLG00020004200	lyn	93	37.239	ENSFDAG00000011405	TGS1	76	40.828	Fukomys_damarensis
ENSORLG00020004200	lyn	96	34.842	ENSGALG00000015340	TGS1	63	72.018	Gallus_gallus
ENSORLG00020004200	lyn	96	35.606	ENSGAGG00000019590	TGS1	86	71.689	Gopherus_agassizii
ENSORLG00020004200	lyn	68	45.724	ENSHBUG00000003518	lyn	100	46.346	Haplochromis_burtoni
ENSORLG00020004200	lyn	71	75.926	ENSHGLG00000000284	TGS1	62	75.926	Heterocephalus_glaber_female
ENSORLG00020004200	lyn	96	46.263	ENSHCOG00000014161	lyn	100	45.176	Hippocampus_comes
ENSORLG00020004200	lyn	76	44.883	ENSIPUG00000002294	tgs1	97	40.069	Ictalurus_punctatus
ENSORLG00020004200	lyn	96	47.939	ENSKMAG00000019371	-	99	48.810	Kryptolebias_marmoratus
ENSORLG00020004200	lyn	96	51.013	ENSLBEG00000027341	-	99	50.898	Labrus_bergylta
ENSORLG00020004200	lyn	95	34.594	ENSLACG00000008074	TGS1	87	41.797	Latimeria_chalumnae
ENSORLG00020004200	lyn	82	49.451	ENSLOCG00000005492	lyn	99	36.878	Lepisosteus_oculatus
ENSORLG00020004200	lyn	96	48.652	ENSMAMG00000009542	TGS1	100	47.362	Mastacembelus_armatus
ENSORLG00020004200	lyn	96	47.506	ENSMZEG00005015681	lyn	99	46.690	Maylandia_zebra
ENSORLG00020004200	lyn	68	75.000	ENSMMOG00000021495	lyn	92	75.000	Mola_mola
ENSORLG00020004200	lyn	79	38.639	ENSMODG00000009174	TGS1	86	37.956	Monodelphis_domestica
ENSORLG00020004200	lyn	83	51.613	ENSMALG00000021440	lyn	99	51.946	Monopterus_albus
ENSORLG00020004200	lyn	78	73.953	MGP_PahariEiJ_G0023901	-	63	73.953	Mus_pahari
ENSORLG00020004200	lyn	83	37.515	ENSOANG00000021853	TGS1	84	39.568	Ornithorhynchus_anatinus
ENSORLG00020004200	lyn	100	93.214	ENSORLG00000004299	lyn	100	93.214	Oryzias_latipes
ENSORLG00020004200	lyn	87	93.981	ENSORLG00015007251	lyn	100	93.570	Oryzias_latipes_hsok
ENSORLG00020004200	lyn	97	78.091	ENSOMEG00000020174	lyn	99	77.356	Oryzias_melastigma
ENSORLG00020004200	lyn	91	45.636	ENSPKIG00000005454	lyn	67	45.622	Paramormyrops_kingsleyae
ENSORLG00020004200	lyn	96	35.016	ENSPSIG00000014983	TGS1	82	44.699	Pelodiscus_sinensis
ENSORLG00020004200	lyn	74	75.877	ENSPMGG00000012711	lyn	87	78.341	Periophthalmus_magnuspinnatus
ENSORLG00020004200	lyn	95	35.194	ENSPCIG00000016232	TGS1	75	38.218	Phascolarctos_cinereus
ENSORLG00020004200	lyn	75	46.119	ENSPFOG00000001545	-	100	45.889	Poecilia_formosa
ENSORLG00020004200	lyn	89	40.226	ENSPREG00000012261	-	64	33.138	Poecilia_reticulata
ENSORLG00020004200	lyn	69	71.493	ENSPVAG00000016399	TGS1	63	72.558	Pteropus_vampyrus
ENSORLG00020004200	lyn	83	49.528	ENSPNYG00000023004	lyn	92	50.000	Pundamilia_nyererei
ENSORLG00020004200	lyn	93	44.844	ENSPNAG00000022249	lyn	97	43.389	Pygocentrus_nattereri
ENSORLG00020004200	lyn	95	35.746	ENSSHAG00000012878	TGS1	98	34.894	Sarcophilus_harrisii
ENSORLG00020004200	lyn	93	41.917	ENSSFOG00015001308	tgs1	75	47.546	Scleropages_formosus
ENSORLG00020004200	lyn	96	49.830	ENSSMAG00000019469	lyn	99	50.114	Scophthalmus_maximus
ENSORLG00020004200	lyn	59	82.018	ENSSLDG00000009024	lyn	99	82.018	Seriola_lalandi_dorsalis
ENSORLG00020004200	lyn	92	48.540	ENSSPAG00000002170	lyn	97	47.349	Stegastes_partitus
ENSORLG00020004200	lyn	93	36.124	ENSTGUG00000011050	TGS1	100	35.986	Taeniopygia_guttata
ENSORLG00020004200	lyn	57	66.288	ENSTRUG00000009532	lyn	77	67.843	Takifugu_rubripes
ENSORLG00020004200	lyn	84	45.204	ENSTNIG00000018133	lyn	99	43.943	Tetraodon_nigroviridis
ENSORLG00020004200	lyn	84	38.432	ENSXETG00000005648	tgs1	88	37.292	Xenopus_tropicalis