EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020004392 (Gene tree)
Gene ID: -
Gene Symbol: raver1
Alias: -
Full Name: ribonucleoprotein%2C PTB-binding 1
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 9479 bases
Position: chr8:7982752-7992230
Accession: ZDB-GENE-050522-99
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020023480	RRM_1	PF00076.22	3e-29	1	2
ENSORLP00020023480	RRM_1	PF00076.22	3e-29	2	2
ENSORLP00020023494	RRM_1	PF00076.22	3.1e-29	1	2
ENSORLP00020023494	RRM_1	PF00076.22	3.1e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020009422	-	2166	-	ENSORLP00020023480	721 (aa)	-	-
ENSORLT00020009391	-	4680	-	ENSORLP00020023494	726 (aa)	-	-

Gene Model

Click here to download ENSORLG00020004392's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020004392's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020004392	raver1	67	66.832	ENSG00000161847	RAVER1	76	63.014	Homo_sapiens
ENSORLG00020004392	raver1	98	81.590	ENSAPOG00000017267	raver1	92	81.481	Acanthochromis_polyacanthus
ENSORLG00020004392	raver1	67	65.404	ENSAMEG00000011738	RAVER1	94	49.307	Ailuropoda_melanoleuca
ENSORLG00020004392	raver1	98	82.402	ENSAOCG00000005128	raver1	97	82.280	Amphiprion_ocellaris
ENSORLG00020004392	raver1	98	82.247	ENSAPEG00000010854	raver1	100	82.128	Amphiprion_percula
ENSORLG00020004392	raver1	98	80.609	ENSATEG00000021004	raver1	100	80.491	Anabas_testudineus
ENSORLG00020004392	raver1	82	48.457	ENSACAG00000008386	-	94	48.260	Anolis_carolinensis
ENSORLG00020004392	raver1	70	65.258	ENSANAG00000028226	RAVER1	72	65.258	Aotus_nancymaae
ENSORLG00020004392	raver1	100	80.218	ENSACLG00000018492	raver1	95	80.218	Astatotilapia_calliptera
ENSORLG00020004392	raver1	93	66.619	ENSAMXG00000005132	raver1	100	64.037	Astyanax_mexicanus
ENSORLG00020004392	raver1	62	83.673	ENSBTAG00000015721	RAVER1	97	52.381	Bos_taurus
ENSORLG00020004392	raver1	68	66.667	ENSCJAG00000005671	RAVER1	70	66.667	Callithrix_jacchus
ENSORLG00020004392	raver1	69	66.019	ENSCAFG00000017861	RAVER1	95	51.046	Canis_familiaris
ENSORLG00020004392	raver1	69	66.019	ENSCAFG00020024449	RAVER1	70	66.019	Canis_lupus_dingo
ENSORLG00020004392	raver1	67	66.832	ENSCHIG00000006718	RAVER1	67	66.832	Capra_hircus
ENSORLG00020004392	raver1	61	68.715	ENSTSYG00000027107	RAVER1	100	52.688	Carlito_syrichta
ENSORLG00020004392	raver1	71	62.469	ENSCAPG00000002269	RAVER1	67	69.318	Cavia_aperea
ENSORLG00020004392	raver1	66	68.205	ENSCPOG00000001008	RAVER1	68	66.749	Cavia_porcellus
ENSORLG00020004392	raver1	70	65.258	ENSCCAG00000031723	RAVER1	72	65.258	Cebus_capucinus
ENSORLG00020004392	raver1	67	67.079	ENSCATG00000043863	RAVER1	69	67.079	Cercocebus_atys
ENSORLG00020004392	raver1	67	67.254	ENSCLAG00000009336	RAVER1	68	66.259	Chinchilla_lanigera
ENSORLG00020004392	raver1	67	67.588	ENSCSAG00000007317	RAVER1	58	67.588	Chlorocebus_sabaeus
ENSORLG00020004392	raver1	93	50.983	ENSCPBG00000005349	-	98	50.983	Chrysemys_picta_bellii
ENSORLG00020004392	raver1	67	67.246	ENSCANG00000008337	RAVER1	69	67.246	Colobus_angolensis_palliatus
ENSORLG00020004392	raver1	67	65.995	ENSCGRG00001013260	-	70	62.093	Cricetulus_griseus_chok1gshd
ENSORLG00020004392	raver1	67	65.995	ENSCGRG00000015138	-	70	62.093	Cricetulus_griseus_crigri
ENSORLG00020004392	raver1	98	73.077	ENSCSEG00000021092	raver1	100	72.838	Cynoglossus_semilaevis
ENSORLG00020004392	raver1	100	77.415	ENSCVAG00000013971	raver1	100	77.415	Cyprinodon_variegatus
ENSORLG00020004392	raver1	98	66.620	ENSDARG00000052617	raver1	100	66.213	Danio_rerio
ENSORLG00020004392	raver1	58	62.195	ENSDNOG00000035742	-	56	61.377	Dasypus_novemcinctus
ENSORLG00020004392	raver1	64	64.304	ENSDORG00000010106	-	68	61.985	Dipodomys_ordii
ENSORLG00020004392	raver1	53	67.183	ENSEASG00005010544	-	68	68.351	Equus_asinus_asinus
ENSORLG00020004392	raver1	67	67.337	ENSECAG00000024966	RAVER1	65	67.337	Equus_caballus
ENSORLG00020004392	raver1	98	71.369	ENSELUG00000023287	raver1	100	71.390	Esox_lucius
ENSORLG00020004392	raver1	67	67.172	ENSFCAG00000009435	RAVER1	65	67.172	Felis_catus
ENSORLG00020004392	raver1	66	67.263	ENSFDAG00000015113	RAVER1	96	49.794	Fukomys_damarensis
ENSORLG00020004392	raver1	94	67.832	ENSGMOG00000003649	raver1	100	68.531	Gadus_morhua
ENSORLG00020004392	raver1	100	77.582	ENSGAFG00000015944	raver1	100	77.582	Gambusia_affinis
ENSORLG00020004392	raver1	94	70.396	ENSGACG00000013818	raver1	100	72.306	Gasterosteus_aculeatus
ENSORLG00020004392	raver1	80	64.423	ENSGAGG00000011748	-	99	67.095	Gopherus_agassizii
ENSORLG00020004392	raver1	67	66.832	ENSGGOG00000006015	RAVER1	69	66.832	Gorilla_gorilla
ENSORLG00020004392	raver1	99	80.220	ENSHBUG00000021210	raver1	100	74.317	Haplochromis_burtoni
ENSORLG00020004392	raver1	66	67.092	ENSHGLG00000015460	RAVER1	66	66.583	Heterocephalus_glaber_female
ENSORLG00020004392	raver1	66	67.092	ENSHGLG00100000812	RAVER1	66	66.583	Heterocephalus_glaber_male
ENSORLG00020004392	raver1	100	72.343	ENSHCOG00000000449	raver1	98	73.706	Hippocampus_comes
ENSORLG00020004392	raver1	98	65.374	ENSIPUG00000013153	raver1	100	66.076	Ictalurus_punctatus
ENSORLG00020004392	raver1	68	66.914	ENSSTOG00000003241	RAVER1	68	66.914	Ictidomys_tridecemlineatus
ENSORLG00020004392	raver1	68	66.259	ENSJJAG00000018219	-	98	50.204	Jaculus_jaculus
ENSORLG00020004392	raver1	100	79.918	ENSKMAG00000017355	raver1	100	79.918	Kryptolebias_marmoratus
ENSORLG00020004392	raver1	93	79.080	ENSLBEG00000008268	raver1	96	79.321	Labrus_bergylta
ENSORLG00020004392	raver1	71	60.664	ENSLACG00000005809	-	99	49.928	Latimeria_chalumnae
ENSORLG00020004392	raver1	97	60.158	ENSLOCG00000007500	raver1	100	59.515	Lepisosteus_oculatus
ENSORLG00020004392	raver1	57	83.673	ENSLAFG00000003664	-	66	69.602	Loxodonta_africana
ENSORLG00020004392	raver1	67	67.588	ENSMFAG00000037977	RAVER1	94	48.815	Macaca_fascicularis
ENSORLG00020004392	raver1	67	67.588	ENSMMUG00000014897	RAVER1	68	67.588	Macaca_mulatta
ENSORLG00020004392	raver1	67	67.588	ENSMNEG00000028390	RAVER1	68	67.588	Macaca_nemestrina
ENSORLG00020004392	raver1	67	67.327	ENSMLEG00000041959	RAVER1	69	67.327	Mandrillus_leucophaeus
ENSORLG00020004392	raver1	98	78.947	ENSMAMG00000012059	raver1	100	78.854	Mastacembelus_armatus
ENSORLG00020004392	raver1	100	80.218	ENSMZEG00005019002	raver1	100	80.218	Maylandia_zebra
ENSORLG00020004392	raver1	67	66.332	ENSMAUG00000017948	-	70	62.413	Mesocricetus_auratus
ENSORLG00020004392	raver1	68	66.423	ENSMICG00000010326	RAVER1	72	66.423	Microcebus_murinus
ENSORLG00020004392	raver1	67	65.995	ENSMOCG00000015553	-	68	64.964	Microtus_ochrogaster
ENSORLG00020004392	raver1	98	79.917	ENSMMOG00000012093	raver1	100	79.809	Mola_mola
ENSORLG00020004392	raver1	90	48.286	ENSMODG00000005584	-	87	49.501	Monodelphis_domestica
ENSORLG00020004392	raver1	100	76.158	ENSMALG00000016569	raver1	100	77.929	Monopterus_albus
ENSORLG00020004392	raver1	71	61.616	MGP_CAROLIEiJ_G0031860	-	70	61.616	Mus_caroli
ENSORLG00020004392	raver1	67	64.428	ENSMUSG00000010205	Raver1	70	61.379	Mus_musculus
ENSORLG00020004392	raver1	67	62.562	MGP_PahariEiJ_G0014726	-	70	61.048	Mus_pahari
ENSORLG00020004392	raver1	67	64.179	MGP_SPRETEiJ_G0032984	-	70	61.149	Mus_spretus
ENSORLG00020004392	raver1	66	68.367	ENSMPUG00000006712	RAVER1	65	67.929	Mustela_putorius_furo
ENSORLG00020004392	raver1	54	67.085	ENSMLUG00000012328	RAVER1	96	51.120	Myotis_lucifugus
ENSORLG00020004392	raver1	67	64.810	ENSNGAG00000001260	-	70	63.814	Nannospalax_galili
ENSORLG00020004392	raver1	100	71.526	ENSNBRG00000010139	raver1	100	70.708	Neolamprologus_brichardi
ENSORLG00020004392	raver1	67	66.832	ENSNLEG00000012181	RAVER1	69	66.832	Nomascus_leucogenys
ENSORLG00020004392	raver1	60	69.516	ENSMEUG00000003281	-	68	69.516	Notamacropus_eugenii
ENSORLG00020004392	raver1	52	55.039	ENSOPRG00000005855	-	51	55.039	Ochotona_princeps
ENSORLG00020004392	raver1	60	83.673	ENSODEG00000016260	RAVER1	68	65.526	Octodon_degus
ENSORLG00020004392	raver1	92	78.414	ENSONIG00000001559	raver1	99	80.844	Oreochromis_niloticus
ENSORLG00020004392	raver1	70	64.987	ENSOCUG00000020918	RAVER1	77	60.274	Oryctolagus_cuniculus
ENSORLG00020004392	raver1	100	98.485	ENSORLG00000005458	raver1	100	98.485	Oryzias_latipes
ENSORLG00020004392	raver1	100	99.036	ENSORLG00015017222	raver1	100	99.036	Oryzias_latipes_hsok
ENSORLG00020004392	raver1	100	91.930	ENSOMEG00000023956	raver1	96	91.930	Oryzias_melastigma
ENSORLG00020004392	raver1	70	64.953	ENSOGAG00000011071	RAVER1	69	64.953	Otolemur_garnettii
ENSORLG00020004392	raver1	62	83.673	ENSOARG00000015886	RAVER1	64	63.614	Ovis_aries
ENSORLG00020004392	raver1	67	66.832	ENSPPAG00000002611	RAVER1	69	66.832	Pan_paniscus
ENSORLG00020004392	raver1	67	67.172	ENSPPRG00000009912	RAVER1	65	67.172	Panthera_pardus
ENSORLG00020004392	raver1	67	66.832	ENSPTRG00000010466	RAVER1	69	66.832	Pan_troglodytes
ENSORLG00020004392	raver1	67	67.079	ENSPANG00000004122	RAVER1	69	67.079	Papio_anubis
ENSORLG00020004392	raver1	67	65.995	ENSPEMG00000016411	-	70	62.093	Peromyscus_maniculatus_bairdii
ENSORLG00020004392	raver1	68	66.912	ENSPCIG00000018695	-	75	66.748	Phascolarctos_cinereus
ENSORLG00020004392	raver1	100	73.663	ENSPFOG00000007016	raver1	100	75.535	Poecilia_formosa
ENSORLG00020004392	raver1	95	75.250	ENSPLAG00000020793	raver1	99	75.250	Poecilia_latipinna
ENSORLG00020004392	raver1	100	77.038	ENSPMEG00000011220	raver1	100	77.038	Poecilia_mexicana
ENSORLG00020004392	raver1	100	73.124	ENSPREG00000006864	raver1	100	73.124	Poecilia_reticulata
ENSORLG00020004392	raver1	67	66.832	ENSPPYG00000010514	RAVER1	59	66.832	Pongo_abelii
ENSORLG00020004392	raver1	68	66.098	ENSPCOG00000026605	RAVER1	66	66.098	Propithecus_coquereli
ENSORLG00020004392	raver1	60	83.673	ENSPVAG00000003689	RAVER1	68	67.424	Pteropus_vampyrus
ENSORLG00020004392	raver1	100	75.787	ENSPNYG00000013284	raver1	100	75.239	Pundamilia_nyererei
ENSORLG00020004392	raver1	98	66.758	ENSPNAG00000015476	raver1	100	66.081	Pygocentrus_nattereri
ENSORLG00020004392	raver1	67	64.677	ENSRNOG00000020710	Raver1	99	48.831	Rattus_norvegicus
ENSORLG00020004392	raver1	67	67.079	ENSRBIG00000034702	RAVER1	95	51.179	Rhinopithecus_bieti
ENSORLG00020004392	raver1	67	62.871	ENSRROG00000031186	RAVER1	95	51.179	Rhinopithecus_roxellana
ENSORLG00020004392	raver1	85	51.355	ENSSHAG00000008181	-	90	51.891	Sarcophilus_harrisii
ENSORLG00020004392	raver1	98	80.249	ENSSMAG00000004546	raver1	100	80.136	Scophthalmus_maximus
ENSORLG00020004392	raver1	98	82.825	ENSSDUG00000021063	raver1	100	82.674	Seriola_dumerili
ENSORLG00020004392	raver1	98	82.825	ENSSLDG00000014505	raver1	100	82.674	Seriola_lalandi_dorsalis
ENSORLG00020004392	raver1	98	83.380	ENSSPAG00000000688	raver1	100	83.356	Stegastes_partitus
ENSORLG00020004392	raver1	61	83.673	ENSSSCG00000013650	-	64	83.673	Sus_scrofa
ENSORLG00020004392	raver1	98	77.210	ENSTRUG00000025641	raver1	100	77.143	Takifugu_rubripes
ENSORLG00020004392	raver1	67	67.079	ENSTTRG00000009552	RAVER1	68	65.099	Tursiops_truncatus
ENSORLG00020004392	raver1	67	67.677	ENSUAMG00000020385	RAVER1	94	50.554	Ursus_americanus
ENSORLG00020004392	raver1	69	65.777	ENSVVUG00000028976	RAVER1	95	49.863	Vulpes_vulpes
ENSORLG00020004392	raver1	94	50.698	ENSXETG00000011622	raver1	96	50.646	Xenopus_tropicalis
ENSORLG00020004392	raver1	100	78.397	ENSXCOG00000016368	raver1	100	78.397	Xiphophorus_couchianus
ENSORLG00020004392	raver1	100	78.397	ENSXMAG00000000217	raver1	100	78.397	Xiphophorus_maculatus