EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020004438 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: RALY RNA binding protein like
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 119960 bases
Position: chr20:21088643-21208602
Accession: 101169395
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020003608	RRM_1	PF00076.22	6.7e-11	1	1
ENSORLP00020003620	RRM_1	PF00076.22	6.7e-11	1	1
ENSORLP00020003632	RRM_1	PF00076.22	6.7e-11	1	1
ENSORLP00020003590	RRM_1	PF00076.22	7e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020009348	-	3615	-	ENSORLP00020003608	292 (aa)	XP_023805867	UPI000CE274E5
ENSORLT00020009325	-	3926	-	ENSORLP00020003620	292 (aa)	XP_023805867	UPI000CE274E5
ENSORLT00020009308	-	4100	-	ENSORLP00020003632	292 (aa)	XP_023805867	UPI000CE274E5
ENSORLT00020009372	-	900	-	ENSORLP00020003590	299 (aa)	-	-

Gene Model

Click here to download ENSORLG00020004438's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020004438's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020004438	-	89	50.370	ENSORLG00020018228	hnrnpc	83	49.638
ENSORLG00020004438	-	100	71.284	ENSORLG00020000082	-	100	70.270

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020004438	-	100	73.311	ENSAPOG00000008744	-	100	73.311	Acanthochromis_polyacanthus
ENSORLG00020004438	-	97	67.354	ENSACIG00000007143	-	97	67.354	Amphilophus_citrinellus
ENSORLG00020004438	-	100	96.575	ENSAOCG00000001605	-	100	96.575	Amphiprion_ocellaris
ENSORLG00020004438	-	100	73.986	ENSAOCG00000023599	-	100	73.986	Amphiprion_ocellaris
ENSORLG00020004438	-	97	66.107	ENSATEG00000022219	-	92	71.769	Anabas_testudineus
ENSORLG00020004438	-	77	94.667	ENSATEG00000023356	-	87	94.667	Anabas_testudineus
ENSORLG00020004438	-	100	96.246	ENSACLG00000006949	-	100	95.222	Astatotilapia_calliptera
ENSORLG00020004438	-	100	74.237	ENSACLG00000011720	-	100	74.237	Astatotilapia_calliptera
ENSORLG00020004438	-	100	89.041	ENSAMXG00000019031	-	100	89.041	Astyanax_mexicanus
ENSORLG00020004438	-	100	64.646	ENSAMXG00000032617	-	100	64.646	Astyanax_mexicanus
ENSORLG00020004438	-	100	68.243	ENSCSEG00000014237	-	100	67.905	Cynoglossus_semilaevis
ENSORLG00020004438	-	100	73.311	ENSCVAG00000013624	-	100	73.311	Cyprinodon_variegatus
ENSORLG00020004438	-	100	93.515	ENSCVAG00000018104	-	100	94.539	Cyprinodon_variegatus
ENSORLG00020004438	-	59	77.193	ENSDARG00000090292	ralyl	81	79.012	Danio_rerio
ENSORLG00020004438	-	94	74.552	ENSELUG00000001702	-	97	74.912	Esox_lucius
ENSORLG00020004438	-	57	78.788	ENSGMOG00000005914	-	100	78.788	Gadus_morhua
ENSORLG00020004438	-	59	91.329	ENSGACG00000004991	-	91	93.373	Gasterosteus_aculeatus
ENSORLG00020004438	-	100	73.986	ENSHBUG00000010040	-	100	73.986	Haplochromis_burtoni
ENSORLG00020004438	-	100	96.246	ENSHBUG00000015412	-	100	95.222	Haplochromis_burtoni
ENSORLG00020004438	-	100	89.726	ENSIPUG00000000507	ralyl	100	89.726	Ictalurus_punctatus
ENSORLG00020004438	-	100	95.890	ENSKMAG00000018155	-	100	95.890	Kryptolebias_marmoratus
ENSORLG00020004438	-	100	70.608	ENSKMAG00000022093	-	100	72.297	Kryptolebias_marmoratus
ENSORLG00020004438	-	100	93.515	ENSLBEG00000011011	-	100	93.857	Labrus_bergylta
ENSORLG00020004438	-	100	74.324	ENSLBEG00000012873	-	100	73.986	Labrus_bergylta
ENSORLG00020004438	-	100	83.904	ENSLOCG00000012787	ralyl	99	83.562	Lepisosteus_oculatus
ENSORLG00020004438	-	99	70.690	ENSMAMG00000001723	-	97	70.690	Mastacembelus_armatus
ENSORLG00020004438	-	100	74.237	ENSMZEG00005024447	-	100	74.237	Maylandia_zebra
ENSORLG00020004438	-	98	92.096	ENSMZEG00005018748	-	99	91.065	Maylandia_zebra
ENSORLG00020004438	-	97	67.000	ENSMMOG00000020441	-	88	64.078	Mola_mola
ENSORLG00020004438	-	100	94.863	ENSMALG00000012952	-	100	94.863	Monopterus_albus
ENSORLG00020004438	-	100	73.986	ENSMALG00000019019	-	78	73.986	Monopterus_albus
ENSORLG00020004438	-	97	68.041	ENSNBRG00000011206	-	97	68.041	Neolamprologus_brichardi
ENSORLG00020004438	-	98	93.127	ENSNBRG00000011376	-	99	93.127	Neolamprologus_brichardi
ENSORLG00020004438	-	100	100.000	ENSORLG00000012719	-	100	100.000	Oryzias_latipes
ENSORLG00020004438	-	100	72.635	ENSORLG00000017934	-	100	70.608	Oryzias_latipes
ENSORLG00020004438	-	100	72.635	ENSORLG00015004280	-	100	70.608	Oryzias_latipes_hsok
ENSORLG00020004438	-	100	99.658	ENSORLG00015004727	-	100	99.658	Oryzias_latipes_hsok
ENSORLG00020004438	-	100	72.973	ENSOMEG00000011821	-	100	71.284	Oryzias_melastigma
ENSORLG00020004438	-	100	98.973	ENSOMEG00000001170	-	100	98.973	Oryzias_melastigma
ENSORLG00020004438	-	100	79.522	ENSPKIG00000015926	-	100	79.522	Paramormyrops_kingsleyae
ENSORLG00020004438	-	80	81.857	ENSPMGG00000014481	-	98	80.932	Periophthalmus_magnuspinnatus
ENSORLG00020004438	-	99	66.892	ENSPMGG00000009532	-	99	66.892	Periophthalmus_magnuspinnatus
ENSORLG00020004438	-	97	70.805	ENSPFOG00000006120	-	99	70.333	Poecilia_formosa
ENSORLG00020004438	-	97	66.319	ENSPLAG00000009877	-	75	67.606	Poecilia_latipinna
ENSORLG00020004438	-	97	96.853	ENSPLAG00000011323	ralyl	100	96.853	Poecilia_latipinna
ENSORLG00020004438	-	97	66.319	ENSPMEG00000013624	-	80	65.862	Poecilia_mexicana
ENSORLG00020004438	-	97	96.853	ENSPMEG00000023847	ralyl	100	96.853	Poecilia_mexicana
ENSORLG00020004438	-	97	95.105	ENSPREG00000001956	ralyl	100	95.105	Poecilia_reticulata
ENSORLG00020004438	-	97	73.519	ENSPREG00000013805	-	100	68.354	Poecilia_reticulata
ENSORLG00020004438	-	98	92.096	ENSPNYG00000003548	-	99	91.065	Pundamilia_nyererei
ENSORLG00020004438	-	97	68.041	ENSPNYG00000008772	-	97	68.041	Pundamilia_nyererei
ENSORLG00020004438	-	100	68.259	ENSPNAG00000026098	-	100	67.466	Pygocentrus_nattereri
ENSORLG00020004438	-	100	89.726	ENSPNAG00000000498	-	88	89.384	Pygocentrus_nattereri
ENSORLG00020004438	-	100	89.456	ENSSFOG00015009401	-	100	87.755	Scleropages_formosus
ENSORLG00020004438	-	100	68.493	ENSSFOG00015004575	-	96	74.912	Scleropages_formosus
ENSORLG00020004438	-	100	93.151	ENSSMAG00000005608	-	100	93.151	Scophthalmus_maximus
ENSORLG00020004438	-	97	70.877	ENSSMAG00000015907	-	97	69.257	Scophthalmus_maximus
ENSORLG00020004438	-	100	96.575	ENSSDUG00000007587	-	100	96.575	Seriola_dumerili
ENSORLG00020004438	-	100	73.986	ENSSDUG00000012473	-	100	73.986	Seriola_dumerili
ENSORLG00020004438	-	100	95.904	ENSSLDG00000020603	-	100	95.904	Seriola_lalandi_dorsalis
ENSORLG00020004438	-	100	73.649	ENSSLDG00000011534	-	100	73.649	Seriola_lalandi_dorsalis
ENSORLG00020004438	-	100	62.329	ENSSPAG00000013858	-	96	62.329	Stegastes_partitus
ENSORLG00020004438	-	82	76.987	ENSTRUG00000003829	-	94	73.477	Takifugu_rubripes
ENSORLG00020004438	-	97	68.367	ENSTNIG00000005594	-	99	68.367	Tetraodon_nigroviridis
ENSORLG00020004438	-	100	71.769	ENSXETG00000017729	ralyl	99	72.789	Xenopus_tropicalis
ENSORLG00020004438	-	97	93.878	ENSXCOG00000015156	-	93	93.878	Xiphophorus_couchianus
ENSORLG00020004438	-	100	97.945	ENSXMAG00000008396	-	100	97.945	Xiphophorus_maculatus
ENSORLG00020004438	-	100	74.324	ENSXMAG00000007614	-	100	74.324	Xiphophorus_maculatus