EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020004477 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 24408 bases
Position: chr5:19902702-19927109
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020023548	RNB	PF00773.19	1.2e-51	1	1
ENSORLP00020003690	RNB	PF00773.19	1.3e-51	1	1
ENSORLP00020023548	ResIII	PF04851.15	3.6e-08	1	1
ENSORLP00020003690	ResIII	PF04851.15	3.7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020009253	-	11314	-	ENSORLP00020023548	2879 (aa)	-	-
ENSORLT00020009208	-	10861	-	ENSORLP00020003690	2895 (aa)	-	-

Gene Model

Click here to download ENSORLG00020004477's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020004477's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020004477	-	100	62.941	ENSAPOG00000023564	-	99	62.941	Acanthochromis_polyacanthus
ENSORLG00020004477	-	99	57.651	ENSACIG00000009644	-	99	57.507	Amphilophus_citrinellus
ENSORLG00020004477	-	100	63.443	ENSAOCG00000005001	-	99	63.546	Amphiprion_ocellaris
ENSORLG00020004477	-	100	63.306	ENSAPEG00000002204	-	99	63.409	Amphiprion_percula
ENSORLG00020004477	-	100	60.739	ENSATEG00000002831	-	99	60.739	Anabas_testudineus
ENSORLG00020004477	-	100	59.503	ENSACLG00000026636	-	99	59.780	Astatotilapia_calliptera
ENSORLG00020004477	-	99	52.298	ENSCSEG00000013505	-	99	52.332	Cynoglossus_semilaevis
ENSORLG00020004477	-	99	56.684	ENSCVAG00000009143	-	98	56.350	Cyprinodon_variegatus
ENSORLG00020004477	-	86	50.814	ENSGMOG00000015715	-	100	50.854	Gadus_morhua
ENSORLG00020004477	-	87	57.886	ENSGACG00000011518	-	99	57.837	Gasterosteus_aculeatus
ENSORLG00020004477	-	100	59.469	ENSHBUG00000011353	-	99	59.571	Haplochromis_burtoni
ENSORLG00020004477	-	99	64.010	ENSKMAG00000017824	-	99	63.793	Kryptolebias_marmoratus
ENSORLG00020004477	-	98	54.251	ENSLBEG00000004602	-	99	54.251	Labrus_bergylta
ENSORLG00020004477	-	100	59.699	ENSMAMG00000023766	-	99	59.562	Mastacembelus_armatus
ENSORLG00020004477	-	100	59.524	ENSMZEG00005005021	-	99	59.571	Maylandia_zebra
ENSORLG00020004477	-	100	61.020	ENSMALG00000015934	-	99	60.951	Monopterus_albus
ENSORLG00020004477	-	98	56.522	ENSNBRG00000018910	-	99	56.639	Neolamprologus_brichardi
ENSORLG00020004477	-	99	58.566	ENSONIG00000003110	-	99	58.507	Oreochromis_niloticus
ENSORLG00020004477	-	100	97.674	ENSORLG00000010672	-	100	97.674	Oryzias_latipes
ENSORLG00020004477	-	100	97.917	ENSORLG00015022035	-	100	97.917	Oryzias_latipes_hsok
ENSORLG00020004477	-	100	81.464	ENSOMEG00000001349	-	99	81.602	Oryzias_melastigma
ENSORLG00020004477	-	81	59.535	ENSPFOG00000001606	-	100	60.118	Poecilia_formosa
ENSORLG00020004477	-	99	58.559	ENSPLAG00000011020	-	99	58.559	Poecilia_latipinna
ENSORLG00020004477	-	99	60.151	ENSPMEG00000014289	-	99	60.151	Poecilia_mexicana
ENSORLG00020004477	-	87	59.307	ENSPREG00000013870	-	100	59.111	Poecilia_reticulata
ENSORLG00020004477	-	100	59.456	ENSPNYG00000007526	-	99	59.571	Pundamilia_nyererei
ENSORLG00020004477	-	100	62.170	ENSSDUG00000007057	-	99	62.205	Seriola_dumerili
ENSORLG00020004477	-	99	60.453	ENSSLDG00000020104	-	99	62.420	Seriola_lalandi_dorsalis
ENSORLG00020004477	-	100	62.886	ENSSPAG00000003658	-	99	62.761	Stegastes_partitus
ENSORLG00020004477	-	67	54.779	ENSTRUG00000009427	-	98	54.779	Takifugu_rubripes
ENSORLG00020004477	-	87	54.802	ENSTNIG00000003119	-	100	54.978	Tetraodon_nigroviridis
ENSORLG00020004477	-	99	59.459	ENSXCOG00000003833	-	99	59.459	Xiphophorus_couchianus
ENSORLG00020004477	-	98	60.360	ENSXMAG00000009019	-	99	60.360	Xiphophorus_maculatus