EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020004593 (Gene tree)
Gene ID: -
Gene Symbol: rbm17
Alias: -
Full Name: RNA binding motif protein 17
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 11617 bases
Position: chr23:2701320-2712936
Accession: ZDB-GENE-040426-817
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020003779	RRM_1	PF00076.22	3.7e-05	1	1
ENSORLP00020003790	RRM_1	PF00076.22	4.3e-05	1	1
ENSORLP00020003779	G-patch	PF01585.23	4.1e-13	1	1
ENSORLP00020003790	G-patch	PF01585.23	4.7e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020009073	-	1158	-	ENSORLP00020003779	385 (aa)	-	-
ENSORLT00020009054	-	2816	-	ENSORLP00020003790	427 (aa)	-	-

Gene Model

Click here to download ENSORLG00020004593's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020004593's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020004593	rbm17	100	78.519	ENSG00000134453	RBM17	100	79.717	Homo_sapiens
ENSORLG00020004593	rbm17	97	93.285	ENSAPOG00000007101	rbm17	99	93.285	Acanthochromis_polyacanthus
ENSORLG00020004593	rbm17	100	78.765	ENSAMEG00000002107	RBM17	100	79.953	Ailuropoda_melanoleuca
ENSORLG00020004593	rbm17	100	90.123	ENSACIG00000006251	rbm17	100	90.123	Amphilophus_citrinellus
ENSORLG00020004593	rbm17	98	93.349	ENSAOCG00000014892	rbm17	100	93.349	Amphiprion_ocellaris
ENSORLG00020004593	rbm17	98	93.349	ENSAPEG00000022779	rbm17	100	93.349	Amphiprion_percula
ENSORLG00020004593	rbm17	98	91.924	ENSATEG00000004406	rbm17	100	91.924	Anabas_testudineus
ENSORLG00020004593	rbm17	100	79.310	ENSAPLG00000004190	RBM17	100	80.471	Anas_platyrhynchos
ENSORLG00020004593	rbm17	88	77.892	ENSACAG00000005418	RBM17	99	77.892	Anolis_carolinensis
ENSORLG00020004593	rbm17	100	72.613	ENSANAG00000019330	-	95	87.931	Aotus_nancymaae
ENSORLG00020004593	rbm17	100	80.050	ENSANAG00000030127	RBM17	98	89.256	Aotus_nancymaae
ENSORLG00020004593	rbm17	100	91.940	ENSACLG00000003928	rbm17	100	91.940	Astatotilapia_calliptera
ENSORLG00020004593	rbm17	98	81.797	ENSAMXG00000005853	rbm17	100	83.688	Astyanax_mexicanus
ENSORLG00020004593	rbm17	100	78.765	ENSBTAG00000021951	RBM17	100	79.953	Bos_taurus
ENSORLG00020004593	rbm17	100	77.531	ENSBTAG00000011094	-	100	77.594	Bos_taurus
ENSORLG00020004593	rbm17	73	34.828	WBGene00010233	F58B3.7	97	32.439	Caenorhabditis_elegans
ENSORLG00020004593	rbm17	100	81.218	ENSCJAG00000020573	RBM17	100	81.218	Callithrix_jacchus
ENSORLG00020004593	rbm17	100	78.765	ENSCAFG00000005206	RBM17	100	79.953	Canis_familiaris
ENSORLG00020004593	rbm17	100	81.378	ENSCAFG00020005420	RBM17	100	81.378	Canis_lupus_dingo
ENSORLG00020004593	rbm17	100	83.763	ENSCHIG00000023204	-	100	83.763	Capra_hircus
ENSORLG00020004593	rbm17	100	77.887	ENSCHIG00000019921	-	100	76.651	Capra_hircus
ENSORLG00020004593	rbm17	100	78.186	ENSTSYG00000001165	RBM17	99	90.678	Carlito_syrichta
ENSORLG00020004593	rbm17	96	67.380	ENSCAPG00000006275	RBM17	100	69.602	Cavia_aperea
ENSORLG00020004593	rbm17	100	83.120	ENSCPOG00000005679	RBM17	99	81.586	Cavia_porcellus
ENSORLG00020004593	rbm17	100	79.012	ENSCCAG00000018655	RBM17	98	89.256	Cebus_capucinus
ENSORLG00020004593	rbm17	100	83.505	ENSCATG00000041566	RBM17	97	90.000	Cercocebus_atys
ENSORLG00020004593	rbm17	98	80.189	ENSCLAG00000012195	RBM17	99	79.009	Chinchilla_lanigera
ENSORLG00020004593	rbm17	100	78.519	ENSCSAG00000013564	RBM17	100	79.717	Chlorocebus_sabaeus
ENSORLG00020004593	rbm17	91	64.122	ENSCHOG00000005131	RBM17	100	64.122	Choloepus_hoffmanni
ENSORLG00020004593	rbm17	100	79.064	ENSCPBG00000019836	RBM17	100	80.000	Chrysemys_picta_bellii
ENSORLG00020004593	rbm17	100	44.952	ENSCSAVG00000008782	-	100	45.390	Ciona_savignyi
ENSORLG00020004593	rbm17	97	74.202	ENSCANG00000023715	-	99	72.414	Colobus_angolensis_palliatus
ENSORLG00020004593	rbm17	100	78.465	ENSCANG00000030987	RBM17	97	90.000	Colobus_angolensis_palliatus
ENSORLG00020004593	rbm17	100	67.179	ENSCGRG00001009256	-	100	63.819	Cricetulus_griseus_chok1gshd
ENSORLG00020004593	rbm17	98	80.189	ENSCGRG00001013842	Rbm17	100	79.009	Cricetulus_griseus_chok1gshd
ENSORLG00020004593	rbm17	98	80.189	ENSCGRG00000006907	Rbm17	100	79.009	Cricetulus_griseus_crigri
ENSORLG00020004593	rbm17	100	85.926	ENSCSEG00000018164	rbm17	100	86.730	Cynoglossus_semilaevis
ENSORLG00020004593	rbm17	100	87.532	ENSCVAG00000002476	rbm17	100	87.532	Cyprinodon_variegatus
ENSORLG00020004593	rbm17	98	80.047	ENSDARG00000031346	rbm17	100	80.047	Danio_rerio
ENSORLG00020004593	rbm17	100	78.519	ENSDNOG00000035920	RBM17	100	78.538	Dasypus_novemcinctus
ENSORLG00020004593	rbm17	99	37.589	FBgn0086683	Spf45	99	37.360	Drosophila_melanogaster
ENSORLG00020004593	rbm17	89	85.782	ENSETEG00000006642	RBM17	86	85.782	Echinops_telfairi
ENSORLG00020004593	rbm17	65	69.048	ENSEBUG00000010253	rbm17	84	69.048	Eptatretus_burgeri
ENSORLG00020004593	rbm17	100	82.653	ENSEASG00005019205	-	100	82.653	Equus_asinus_asinus
ENSORLG00020004593	rbm17	92	77.394	ENSEASG00005009236	-	100	76.845	Equus_asinus_asinus
ENSORLG00020004593	rbm17	100	70.516	ENSECAG00000001379	-	100	70.519	Equus_caballus
ENSORLG00020004593	rbm17	100	72.680	ENSECAG00000008939	RBM17	100	73.969	Equus_caballus
ENSORLG00020004593	rbm17	85	63.215	ENSEEUG00000013077	RBM17	100	61.853	Erinaceus_europaeus
ENSORLG00020004593	rbm17	98	83.217	ENSELUG00000006440	rbm17	100	83.217	Esox_lucius
ENSORLG00020004593	rbm17	100	78.765	ENSFCAG00000031988	RBM17	100	79.953	Felis_catus
ENSORLG00020004593	rbm17	100	78.079	ENSFALG00000001790	RBM17	100	79.059	Ficedula_albicollis
ENSORLG00020004593	rbm17	98	80.189	ENSFDAG00000007470	RBM17	100	79.009	Fukomys_damarensis
ENSORLG00020004593	rbm17	100	92.248	ENSFHEG00000001266	rbm17	100	92.248	Fundulus_heteroclitus
ENSORLG00020004593	rbm17	98	81.190	ENSGMOG00000008438	rbm17	100	81.190	Gadus_morhua
ENSORLG00020004593	rbm17	100	79.557	ENSGALG00000006332	RBM17	100	80.471	Gallus_gallus
ENSORLG00020004593	rbm17	100	90.102	ENSGAFG00000019879	rbm17	100	89.848	Gambusia_affinis
ENSORLG00020004593	rbm17	98	88.124	ENSGACG00000019174	rbm17	99	88.124	Gasterosteus_aculeatus
ENSORLG00020004593	rbm17	100	79.064	ENSGAGG00000019906	RBM17	100	80.000	Gopherus_agassizii
ENSORLG00020004593	rbm17	100	91.940	ENSHBUG00000016624	rbm17	100	93.112	Haplochromis_burtoni
ENSORLG00020004593	rbm17	98	80.189	ENSHGLG00000011580	RBM17	100	79.009	Heterocephalus_glaber_female
ENSORLG00020004593	rbm17	100	67.172	ENSHGLG00100010556	-	100	63.889	Heterocephalus_glaber_male
ENSORLG00020004593	rbm17	98	80.189	ENSHGLG00100010460	RBM17	100	79.009	Heterocephalus_glaber_male
ENSORLG00020004593	rbm17	98	87.351	ENSHCOG00000010865	rbm17	100	87.351	Hippocampus_comes
ENSORLG00020004593	rbm17	100	80.201	ENSIPUG00000007699	Rbm17	100	81.176	Ictalurus_punctatus
ENSORLG00020004593	rbm17	98	80.189	ENSSTOG00000013591	RBM17	100	79.009	Ictidomys_tridecemlineatus
ENSORLG00020004593	rbm17	100	58.231	ENSJJAG00000000993	-	100	57.746	Jaculus_jaculus
ENSORLG00020004593	rbm17	98	80.189	ENSJJAG00000022886	Rbm17	100	79.009	Jaculus_jaculus
ENSORLG00020004593	rbm17	100	89.673	ENSKMAG00000021400	rbm17	100	90.974	Kryptolebias_marmoratus
ENSORLG00020004593	rbm17	98	89.786	ENSLBEG00000000881	rbm17	100	89.786	Labrus_bergylta
ENSORLG00020004593	rbm17	98	64.953	ENSLACG00000017297	RBM17	99	64.953	Latimeria_chalumnae
ENSORLG00020004593	rbm17	100	79.707	ENSLOCG00000015659	rbm17	100	79.720	Lepisosteus_oculatus
ENSORLG00020004593	rbm17	98	79.953	ENSLAFG00000011629	RBM17	100	78.774	Loxodonta_africana
ENSORLG00020004593	rbm17	100	83.505	ENSMFAG00000035521	RBM17	97	90.000	Macaca_fascicularis
ENSORLG00020004593	rbm17	100	78.519	ENSMMUG00000015152	RBM17	97	90.000	Macaca_mulatta
ENSORLG00020004593	rbm17	100	83.505	ENSMNEG00000017264	RBM17	97	90.000	Macaca_nemestrina
ENSORLG00020004593	rbm17	100	83.505	ENSMLEG00000029340	RBM17	97	90.000	Mandrillus_leucophaeus
ENSORLG00020004593	rbm17	98	90.736	ENSMAMG00000000387	rbm17	100	90.736	Mastacembelus_armatus
ENSORLG00020004593	rbm17	100	91.940	ENSMZEG00005015179	rbm17	100	93.112	Maylandia_zebra
ENSORLG00020004593	rbm17	100	78.398	ENSMGAG00000003981	RBM17	100	80.328	Meleagris_gallopavo
ENSORLG00020004593	rbm17	98	80.189	ENSMAUG00000019247	Rbm17	100	79.009	Mesocricetus_auratus
ENSORLG00020004593	rbm17	100	73.058	ENSMICG00000041489	-	100	73.647	Microcebus_murinus
ENSORLG00020004593	rbm17	100	79.302	ENSMICG00000003976	-	100	79.302	Microcebus_murinus
ENSORLG00020004593	rbm17	92	66.033	ENSMOCG00000014517	-	99	66.576	Microtus_ochrogaster
ENSORLG00020004593	rbm17	98	80.189	ENSMOCG00000011847	Rbm17	100	79.009	Microtus_ochrogaster
ENSORLG00020004593	rbm17	100	83.619	ENSMMOG00000010264	rbm17	100	81.221	Mola_mola
ENSORLG00020004593	rbm17	100	78.272	ENSMODG00000016648	RBM17	100	79.481	Monodelphis_domestica
ENSORLG00020004593	rbm17	100	88.660	ENSMALG00000010597	rbm17	100	90.979	Monopterus_albus
ENSORLG00020004593	rbm17	98	80.425	MGP_CAROLIEiJ_G0023173	Rbm17	100	80.425	Mus_caroli
ENSORLG00020004593	rbm17	98	80.425	ENSMUSG00000037197	Rbm17	100	80.425	Mus_musculus
ENSORLG00020004593	rbm17	98	80.189	MGP_PahariEiJ_G0019233	Rbm17	100	80.189	Mus_pahari
ENSORLG00020004593	rbm17	98	80.425	MGP_SPRETEiJ_G0024091	Rbm17	100	80.425	Mus_spretus
ENSORLG00020004593	rbm17	85	77.657	ENSMPUG00000016359	RBM17	96	76.294	Mustela_putorius_furo
ENSORLG00020004593	rbm17	100	75.490	ENSMLUG00000025709	-	100	74.292	Myotis_lucifugus
ENSORLG00020004593	rbm17	98	78.353	ENSMLUG00000002302	-	100	77.176	Myotis_lucifugus
ENSORLG00020004593	rbm17	98	80.189	ENSNGAG00000000741	Rbm17	100	79.009	Nannospalax_galili
ENSORLG00020004593	rbm17	100	58.505	ENSNGAG00000000663	-	100	58.505	Nannospalax_galili
ENSORLG00020004593	rbm17	100	90.439	ENSNBRG00000018148	rbm17	100	91.990	Neolamprologus_brichardi
ENSORLG00020004593	rbm17	100	79.500	ENSNLEG00000033350	RBM17	98	90.164	Nomascus_leucogenys
ENSORLG00020004593	rbm17	100	72.840	ENSMEUG00000011347	RBM17	100	73.113	Notamacropus_eugenii
ENSORLG00020004593	rbm17	100	69.212	ENSOPRG00000002993	RBM17	100	69.104	Ochotona_princeps
ENSORLG00020004593	rbm17	100	78.484	ENSODEG00000004393	RBM17	100	80.235	Octodon_degus
ENSORLG00020004593	rbm17	97	62.791	ENSODEG00000007286	-	99	61.558	Octodon_degus
ENSORLG00020004593	rbm17	100	88.670	ENSONIG00000011838	rbm17	100	90.499	Oreochromis_niloticus
ENSORLG00020004593	rbm17	100	77.833	ENSOANG00000015455	RBM17	100	78.538	Ornithorhynchus_anatinus
ENSORLG00020004593	rbm17	98	99.284	ENSORLG00000028798	rbm17	100	99.284	Oryzias_latipes
ENSORLG00020004593	rbm17	99	99.059	ENSORLG00015000033	rbm17	100	99.059	Oryzias_latipes_hsok
ENSORLG00020004593	rbm17	98	97.852	ENSOMEG00000012060	rbm17	100	97.852	Oryzias_melastigma
ENSORLG00020004593	rbm17	100	78.431	ENSOGAG00000015687	RBM17	100	79.009	Otolemur_garnettii
ENSORLG00020004593	rbm17	100	78.765	ENSOARG00000012975	RBM17	100	79.953	Ovis_aries
ENSORLG00020004593	rbm17	100	78.960	ENSPPAG00000032347	RBM17	98	90.164	Pan_paniscus
ENSORLG00020004593	rbm17	100	78.765	ENSPPRG00000010706	RBM17	100	79.953	Panthera_pardus
ENSORLG00020004593	rbm17	100	78.765	ENSPTIG00000007596	RBM17	100	79.953	Panthera_tigris_altaica
ENSORLG00020004593	rbm17	100	78.960	ENSPTRG00000002265	RBM17	98	90.164	Pan_troglodytes
ENSORLG00020004593	rbm17	100	83.505	ENSPANG00000023425	RBM17	97	90.000	Papio_anubis
ENSORLG00020004593	rbm17	100	78.061	ENSPKIG00000005048	-	100	77.674	Paramormyrops_kingsleyae
ENSORLG00020004593	rbm17	100	77.941	ENSPKIG00000025526	rbm17	100	79.625	Paramormyrops_kingsleyae
ENSORLG00020004593	rbm17	100	77.696	ENSPSIG00000012332	RBM17	100	78.689	Pelodiscus_sinensis
ENSORLG00020004593	rbm17	100	86.250	ENSPMGG00000007980	rbm17	100	86.250	Periophthalmus_magnuspinnatus
ENSORLG00020004593	rbm17	98	80.189	ENSPEMG00000014320	Rbm17	100	79.009	Peromyscus_maniculatus_bairdii
ENSORLG00020004593	rbm17	100	77.887	ENSPCIG00000019260	-	100	77.934	Phascolarctos_cinereus
ENSORLG00020004593	rbm17	98	91.449	ENSPFOG00000013271	rbm17	100	91.449	Poecilia_formosa
ENSORLG00020004593	rbm17	100	90.306	ENSPLAG00000004455	rbm17	100	91.449	Poecilia_latipinna
ENSORLG00020004593	rbm17	98	91.449	ENSPMEG00000014864	rbm17	100	91.449	Poecilia_mexicana
ENSORLG00020004593	rbm17	100	90.561	ENSPREG00000015589	rbm17	100	91.449	Poecilia_reticulata
ENSORLG00020004593	rbm17	99	60.150	ENSPPYG00000019881	-	100	60.406	Pongo_abelii
ENSORLG00020004593	rbm17	80	57.143	ENSPPYG00000019042	-	100	57.729	Pongo_abelii
ENSORLG00020004593	rbm17	100	78.519	ENSPPYG00000002067	RBM17	100	79.717	Pongo_abelii
ENSORLG00020004593	rbm17	100	71.111	ENSPCAG00000016879	RBM17	100	72.642	Procavia_capensis
ENSORLG00020004593	rbm17	100	80.759	ENSPCOG00000027881	RBM17	100	80.759	Propithecus_coquereli
ENSORLG00020004593	rbm17	100	70.936	ENSPVAG00000015499	RBM17	100	70.647	Pteropus_vampyrus
ENSORLG00020004593	rbm17	100	86.047	ENSPNYG00000015274	rbm17	100	86.563	Pundamilia_nyererei
ENSORLG00020004593	rbm17	100	80.605	ENSPNAG00000030046	rbm17	100	83.688	Pygocentrus_nattereri
ENSORLG00020004593	rbm17	98	80.189	ENSRNOG00000018767	Rbm17	100	79.009	Rattus_norvegicus
ENSORLG00020004593	rbm17	100	79.500	ENSRBIG00000043727	RBM17	97	90.000	Rhinopithecus_bieti
ENSORLG00020004593	rbm17	100	83.505	ENSRROG00000044142	RBM17	97	90.000	Rhinopithecus_roxellana
ENSORLG00020004593	rbm17	100	70.123	ENSSBOG00000023653	-	100	70.353	Saimiri_boliviensis_boliviensis
ENSORLG00020004593	rbm17	100	80.964	ENSSBOG00000031661	-	93	91.304	Saimiri_boliviensis_boliviensis
ENSORLG00020004593	rbm17	100	78.272	ENSSHAG00000012480	-	100	79.481	Sarcophilus_harrisii
ENSORLG00020004593	rbm17	100	78.186	ENSSFOG00015009892	rbm17	100	80.751	Scleropages_formosus
ENSORLG00020004593	rbm17	100	88.946	ENSSMAG00000012368	rbm17	100	87.404	Scophthalmus_maximus
ENSORLG00020004593	rbm17	100	93.023	ENSSDUG00000015015	rbm17	100	93.023	Seriola_dumerili
ENSORLG00020004593	rbm17	100	93.023	ENSSLDG00000014486	rbm17	100	93.023	Seriola_lalandi_dorsalis
ENSORLG00020004593	rbm17	99	78.960	ENSSPUG00000001036	RBM17	99	79.905	Sphenodon_punctatus
ENSORLG00020004593	rbm17	98	93.112	ENSSPAG00000002338	rbm17	100	93.112	Stegastes_partitus
ENSORLG00020004593	rbm17	100	78.765	ENSSSCG00000011134	RBM17	100	79.953	Sus_scrofa
ENSORLG00020004593	rbm17	98	79.529	ENSTGUG00000002013	RBM17	100	79.529	Taeniopygia_guttata
ENSORLG00020004593	rbm17	98	89.786	ENSTRUG00000010698	rbm17	100	89.786	Takifugu_rubripes
ENSORLG00020004593	rbm17	98	89.786	ENSTNIG00000006892	rbm17	100	89.786	Tetraodon_nigroviridis
ENSORLG00020004593	rbm17	100	62.222	ENSTBEG00000014686	RBM17	100	64.198	Tupaia_belangeri
ENSORLG00020004593	rbm17	89	78.851	ENSTTRG00000001344	RBM17	100	77.546	Tursiops_truncatus
ENSORLG00020004593	rbm17	100	80.556	ENSUAMG00000009499	RBM17	100	78.788	Ursus_americanus
ENSORLG00020004593	rbm17	100	83.763	ENSUMAG00000012237	RBM17	100	82.216	Ursus_maritimus
ENSORLG00020004593	rbm17	100	68.905	ENSVPAG00000005497	RBM17	86	85.185	Vicugna_pacos
ENSORLG00020004593	rbm17	100	81.378	ENSVVUG00000006780	RBM17	100	81.378	Vulpes_vulpes
ENSORLG00020004593	rbm17	99	76.790	ENSXETG00000018123	rbm17	100	76.303	Xenopus_tropicalis
ENSORLG00020004593	rbm17	98	91.211	ENSXMAG00000008674	rbm17	100	91.211	Xiphophorus_maculatus