EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSORLG00020004611 (Gene tree)
Gene ID
-
Gene Symbol
smarca4a
Alias
-
Full Name
SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 4
Gene Type
protein_coding
Species
Oryzias_latipes_hni
Status
putative
Strand
Minus strand
Length
14022 bases
Position
chr8:19907895-19921916
Accession
101163329
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSORLP00020003731ResIIIPF04851.151e-0811
ENSORLP00020023606ResIIIPF04851.151.3e-0811
ENSORLP00020003731BRKPF07533.161.6e-1611
ENSORLP00020023606BRKPF07533.161.9e-1611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSORLT00020009086-5689XM_023957991ENSORLP000200236061621 (aa)XP_023813759-
ENSORLT00020009149-4107-ENSORLP000200037311368 (aa)--
Gene Model
Click here to download ENSORLG00020004611's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020004611's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSORLG00020004611smarca4a9885.861ENSORLG00020009728-9880.069
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSORLG00020004611smarca4a10085.889ENSG00000127616SMARCA49995.652Homo_sapiens
ENSORLG00020004611smarca4a9985.530ENSAPOG00000004542SMARCA49685.426Acanthochromis_polyacanthus
ENSORLG00020004611smarca4a7691.807ENSAPOG00000003509smarca4a9889.691Acanthochromis_polyacanthus
ENSORLG00020004611smarca4a9884.224ENSAMEG00000010868SMARCA410081.786Ailuropoda_melanoleuca
ENSORLG00020004611smarca4a9985.817ENSACIG00000003035-9384.802Amphilophus_citrinellus
ENSORLG00020004611smarca4a9993.599ENSACIG00000021550smarca4a9893.723Amphilophus_citrinellus
ENSORLG00020004611smarca4a9990.398ENSAOCG00000019167smarca4a10089.178Amphiprion_ocellaris
ENSORLG00020004611smarca4a9983.819ENSAOCG00000009450-9485.889Amphiprion_ocellaris
ENSORLG00020004611smarca4a9990.541ENSAPEG00000015559smarca4a10089.315Amphiprion_percula
ENSORLG00020004611smarca4a9984.014ENSAPEG00000023108-9781.071Amphiprion_percula
ENSORLG00020004611smarca4a10092.826ENSATEG00000011524smarca4a10092.888Anabas_testudineus
ENSORLG00020004611smarca4a9985.922ENSATEG00000001094-9681.888Anabas_testudineus
ENSORLG00020004611smarca4a9985.688ENSANAG00000036991SMARCA410082.817Aotus_nancymaae
ENSORLG00020004611smarca4a9993.009ENSACLG00000000163smarca4a9892.634Astatotilapia_calliptera
ENSORLG00020004611smarca4a9984.911ENSACLG00000008638-9483.726Astatotilapia_calliptera
ENSORLG00020004611smarca4a9985.368ENSAMXG00000021023smarca4a9584.967Astyanax_mexicanus
ENSORLG00020004611smarca4a9985.265ENSAMXG00000011238-9684.718Astyanax_mexicanus
ENSORLG00020004611smarca4a10086.012ENSBTAG00000019220SMARCA49686.141Bos_taurus
ENSORLG00020004611smarca4a9787.224ENSCJAG00000005936SMARCA49781.896Callithrix_jacchus
ENSORLG00020004611smarca4a10085.714ENSCAFG00000017584SMARCA410085.784Canis_familiaris
ENSORLG00020004611smarca4a10085.714ENSCAFG00020024620SMARCA49985.784Canis_lupus_dingo
ENSORLG00020004611smarca4a10082.313ENSCHIG00000015318SMARCA49682.413Capra_hircus
ENSORLG00020004611smarca4a10086.266ENSTSYG00000012966SMARCA410086.327Carlito_syrichta
ENSORLG00020004611smarca4a9982.395ENSCAPG00000015932SMARCA49488.908Cavia_aperea
ENSORLG00020004611smarca4a10085.836ENSCPOG00000015549SMARCA410085.906Cavia_porcellus
ENSORLG00020004611smarca4a9886.111ENSCCAG00000031660SMARCA49983.121Cebus_capucinus
ENSORLG00020004611smarca4a10085.836ENSCATG00000029530SMARCA410085.906Cercocebus_atys
ENSORLG00020004611smarca4a10086.126ENSCLAG00000011946SMARCA410086.380Chinchilla_lanigera
ENSORLG00020004611smarca4a10085.470ENSCPBG00000009994SMARCA410085.452Chrysemys_picta_bellii
ENSORLG00020004611smarca4a10085.775ENSCANG00000036013SMARCA410085.845Colobus_angolensis_palliatus
ENSORLG00020004611smarca4a10085.531ENSCGRG00001016732Smarca410085.592Cricetulus_griseus_chok1gshd
ENSORLG00020004611smarca4a10085.531ENSCGRG00000017242Smarca410085.592Cricetulus_griseus_crigri
ENSORLG00020004611smarca4a9692.122ENSCSEG00000014771smarca4a9691.868Cynoglossus_semilaevis
ENSORLG00020004611smarca4a9993.192ENSCVAG00000006979smarca4a9993.129Cyprinodon_variegatus
ENSORLG00020004611smarca4a9983.851ENSCVAG00000003018-9483.688Cyprinodon_variegatus
ENSORLG00020004611smarca4a10088.760ENSDARG00000077226smarca4a10088.393Danio_rerio
ENSORLG00020004611smarca4a9681.102ENSDARG00000104339SMARCA49484.003Danio_rerio
ENSORLG00020004611smarca4a9787.182ENSDNOG00000048847SMARCA49089.924Dasypus_novemcinctus
ENSORLG00020004611smarca4a8480.246ENSDORG00000002544Smarca49179.188Dipodomys_ordii
ENSORLG00020004611smarca4a9972.517ENSETEG00000013361SMARCA49474.888Echinops_telfairi
ENSORLG00020004611smarca4a10085.775ENSEASG00005006167SMARCA410084.289Equus_asinus_asinus
ENSORLG00020004611smarca4a10085.836ENSECAG00000008334SMARCA410085.723Equus_caballus
ENSORLG00020004611smarca4a10089.078ENSELUG00000010247smarca4a9788.098Esox_lucius
ENSORLG00020004611smarca4a9980.072ENSELUG00000023232-9682.310Esox_lucius
ENSORLG00020004611smarca4a10085.558ENSFCAG00000004894SMARCA410085.627Felis_catus
ENSORLG00020004611smarca4a7888.676ENSFALG00000004208SMARCA49283.760Ficedula_albicollis
ENSORLG00020004611smarca4a9285.752ENSFDAG00000012237SMARCA49785.819Fukomys_damarensis
ENSORLG00020004611smarca4a10084.409ENSFHEG00000007902-9781.835Fundulus_heteroclitus
ENSORLG00020004611smarca4a9692.595ENSFHEG00000010182smarca4a10092.552Fundulus_heteroclitus
ENSORLG00020004611smarca4a9081.116ENSGMOG00000005756-8779.381Gadus_morhua
ENSORLG00020004611smarca4a8993.220ENSGMOG00000002649smarca4a9486.905Gadus_morhua
ENSORLG00020004611smarca4a8384.322ENSGALG00000047145SMARCA410085.025Gallus_gallus
ENSORLG00020004611smarca4a9982.820ENSGAFG00000008827-9481.113Gambusia_affinis
ENSORLG00020004611smarca4a9190.848ENSGAFG00000014900smarca4a10091.857Gambusia_affinis
ENSORLG00020004611smarca4a10079.728ENSGACG00000016033-9779.018Gasterosteus_aculeatus
ENSORLG00020004611smarca4a9892.038ENSGACG00000006691smarca4a9791.746Gasterosteus_aculeatus
ENSORLG00020004611smarca4a10085.688ENSGAGG00000016757SMARCA49685.651Gopherus_agassizii
ENSORLG00020004611smarca4a10085.836ENSGGOG00000009882SMARCA410085.906Gorilla_gorilla
ENSORLG00020004611smarca4a10093.566ENSHBUG00000021172smarca4a10093.137Haplochromis_burtoni
ENSORLG00020004611smarca4a10084.384ENSHBUG00000005447-9682.606Haplochromis_burtoni
ENSORLG00020004611smarca4a10085.167ENSHGLG00000010519SMARCA410085.167Heterocephalus_glaber_female
ENSORLG00020004611smarca4a10084.878ENSHGLG00100013774SMARCA410084.756Heterocephalus_glaber_male
ENSORLG00020004611smarca4a9592.719ENSHCOG00000009510smarca4a9692.600Hippocampus_comes
ENSORLG00020004611smarca4a10088.415ENSIPUG00000006107smarca4a10088.372Ictalurus_punctatus
ENSORLG00020004611smarca4a9884.997ENSIPUG00000016346-9783.344Ictalurus_punctatus
ENSORLG00020004611smarca4a10085.653ENSSTOG00000007939SMARCA410085.662Ictidomys_tridecemlineatus
ENSORLG00020004611smarca4a10084.081ENSJJAG00000012877Smarca410083.483Jaculus_jaculus
ENSORLG00020004611smarca4a9984.170ENSKMAG00000019518-9486.327Kryptolebias_marmoratus
ENSORLG00020004611smarca4a10093.403ENSKMAG00000011931smarca4a9693.223Kryptolebias_marmoratus
ENSORLG00020004611smarca4a9986.783ENSLBEG00000017383smarca4a9788.254Labrus_bergylta
ENSORLG00020004611smarca4a9981.791ENSLBEG00000020655-9481.464Labrus_bergylta
ENSORLG00020004611smarca4a5778.125ENSLACG00000015309SMARCA410080.330Latimeria_chalumnae
ENSORLG00020004611smarca4a10085.399ENSLOCG00000007820smarca4a9984.784Lepisosteus_oculatus
ENSORLG00020004611smarca4a10085.619ENSLAFG00000001433SMARCA410085.679Loxodonta_africana
ENSORLG00020004611smarca4a10085.836ENSMFAG00000032146SMARCA49985.906Macaca_fascicularis
ENSORLG00020004611smarca4a10085.836ENSMMUG00000012042SMARCA49591.173Macaca_mulatta
ENSORLG00020004611smarca4a10085.819ENSMNEG00000028512SMARCA410085.889Macaca_nemestrina
ENSORLG00020004611smarca4a10085.836ENSMLEG00000034976SMARCA410085.749Mandrillus_leucophaeus
ENSORLG00020004611smarca4a9984.056ENSMAMG00000002841-9486.367Mastacembelus_armatus
ENSORLG00020004611smarca4a10093.378ENSMAMG00000009256smarca4a10093.562Mastacembelus_armatus
ENSORLG00020004611smarca4a9982.893ENSMZEG00005023861-9483.136Maylandia_zebra
ENSORLG00020004611smarca4a10093.448ENSMZEG00005003889smarca4a10093.019Maylandia_zebra
ENSORLG00020004611smarca4a10085.314ENSMAUG00000020731Smarca410085.253Mesocricetus_auratus
ENSORLG00020004611smarca4a10085.619ENSMICG00000009806SMARCA410085.688Microcebus_murinus
ENSORLG00020004611smarca4a10085.375ENSMOCG00000022209Smarca410085.436Microtus_ochrogaster
ENSORLG00020004611smarca4a9983.369ENSMMOG00000008466-9580.983Mola_mola
ENSORLG00020004611smarca4a9591.091ENSMMOG00000007571smarca4a9891.038Mola_mola
ENSORLG00020004611smarca4a10084.523ENSMODG00000006287SMARCA49683.779Monodelphis_domestica
ENSORLG00020004611smarca4a9692.508ENSMALG00000003388smarca4a10092.468Monopterus_albus
ENSORLG00020004611smarca4a9984.315ENSMALG00000021534-9684.387Monopterus_albus
ENSORLG00020004611smarca4a10085.644MGP_CAROLIEiJ_G0031879Smarca410085.706Mus_caroli
ENSORLG00020004611smarca4a10085.644ENSMUSG00000032187Smarca410085.706Mus_musculus
ENSORLG00020004611smarca4a10086.082MGP_PahariEiJ_G0014745Smarca410086.082Mus_pahari
ENSORLG00020004611smarca4a10085.644MGP_SPRETEiJ_G0033003Smarca410085.706Mus_spretus
ENSORLG00020004611smarca4a10085.714ENSMPUG00000005711SMARCA410085.784Mustela_putorius_furo
ENSORLG00020004611smarca4a10086.142ENSMLUG00000004491-10085.653Myotis_lucifugus
ENSORLG00020004611smarca4a10085.994ENSNGAG00000021852Smarca410085.872Nannospalax_galili
ENSORLG00020004611smarca4a9985.064ENSNBRG00000018865-9684.410Neolamprologus_brichardi
ENSORLG00020004611smarca4a9990.394ENSNBRG00000011457smarca4a9689.297Neolamprologus_brichardi
ENSORLG00020004611smarca4a9784.513ENSNLEG00000012389SMARCA49483.494Nomascus_leucogenys
ENSORLG00020004611smarca4a8989.655ENSOPRG00000000885-7989.655Ochotona_princeps
ENSORLG00020004611smarca4a10084.134ENSODEG00000017127SMARCA49683.344Octodon_degus
ENSORLG00020004611smarca4a10093.566ENSONIG00000008196smarca4a10093.199Oreochromis_niloticus
ENSORLG00020004611smarca4a10084.565ENSONIG00000018040-9782.855Oreochromis_niloticus
ENSORLG00020004611smarca4a9980.546ENSOCUG00000001787SMARCA49880.013Oryctolagus_cuniculus
ENSORLG00020004611smarca4a9884.553ENSORLG00000003955-9879.849Oryzias_latipes
ENSORLG00020004611smarca4a10099.877ENSORLG00000015452smarca4a10099.877Oryzias_latipes
ENSORLG00020004611smarca4a9983.718ENSORLG00015007739-9582.754Oryzias_latipes_hsok
ENSORLG00020004611smarca4a10099.753ENSORLG00015016560smarca4a10099.753Oryzias_latipes_hsok
ENSORLG00020004611smarca4a10097.347ENSOMEG00000007486smarca4a10097.347Oryzias_melastigma
ENSORLG00020004611smarca4a9784.171ENSOMEG00000016626-9583.039Oryzias_melastigma
ENSORLG00020004611smarca4a9882.305ENSOGAG00000016148SMARCA410084.332Otolemur_garnettii
ENSORLG00020004611smarca4a10085.469ENSOARG00000017454SMARCA49785.887Ovis_aries
ENSORLG00020004611smarca4a10085.836ENSPPAG00000043191SMARCA410085.906Pan_paniscus
ENSORLG00020004611smarca4a10085.558ENSPPRG00000000064SMARCA410085.627Panthera_pardus
ENSORLG00020004611smarca4a7987.390ENSPTIG00000017447SMARCA410079.713Panthera_tigris_altaica
ENSORLG00020004611smarca4a10085.836ENSPTRG00000010488SMARCA410085.906Pan_troglodytes
ENSORLG00020004611smarca4a10085.941ENSPANG00000011042SMARCA49986.011Papio_anubis
ENSORLG00020004611smarca4a10085.627ENSPKIG00000010087-9784.968Paramormyrops_kingsleyae
ENSORLG00020004611smarca4a10088.142ENSPKIG00000007770SMARCA49688.261Paramormyrops_kingsleyae
ENSORLG00020004611smarca4a10080.551ENSPSIG00000005547SMARCA410080.277Pelodiscus_sinensis
ENSORLG00020004611smarca4a10085.436ENSPEMG00000020389Smarca410085.497Peromyscus_maniculatus_bairdii
ENSORLG00020004611smarca4a10086.116ENSPCIG00000017138SMARCA49685.986Phascolarctos_cinereus
ENSORLG00020004611smarca4a10090.776ENSPFOG00000007892smarca4a10091.692Poecilia_formosa
ENSORLG00020004611smarca4a8888.438ENSPFOG00000012930-9683.757Poecilia_formosa
ENSORLG00020004611smarca4a10090.715ENSPLAG00000014294smarca4a10091.631Poecilia_latipinna
ENSORLG00020004611smarca4a8290.806ENSPLAG00000018616-9585.087Poecilia_latipinna
ENSORLG00020004611smarca4a9986.204ENSPMEG00000008929-9584.132Poecilia_mexicana
ENSORLG00020004611smarca4a9591.260ENSPMEG00000003725smarca4a9792.224Poecilia_mexicana
ENSORLG00020004611smarca4a10090.499ENSPREG00000014608smarca4a10091.352Poecilia_reticulata
ENSORLG00020004611smarca4a9982.556ENSPREG00000014823-9384.138Poecilia_reticulata
ENSORLG00020004611smarca4a10083.842ENSPPYG00000009568SMARCA410083.672Pongo_abelii
ENSORLG00020004611smarca4a7987.417ENSPCAG00000014054SMARCA47590.840Procavia_capensis
ENSORLG00020004611smarca4a10085.714ENSPCOG00000023011SMARCA410085.619Propithecus_coquereli
ENSORLG00020004611smarca4a9579.204ENSPVAG00000007787SMARCA49679.385Pteropus_vampyrus
ENSORLG00020004611smarca4a9991.117ENSPNYG00000000717smarca4a9693.299Pundamilia_nyererei
ENSORLG00020004611smarca4a9985.387ENSPNYG00000023995-9484.331Pundamilia_nyererei
ENSORLG00020004611smarca4a9986.383ENSPNAG00000024136smarca4a9385.219Pygocentrus_nattereri
ENSORLG00020004611smarca4a9985.204ENSPNAG00000006636-9385.695Pygocentrus_nattereri
ENSORLG00020004611smarca4a10085.644ENSRNOG00000009271Smarca410085.706Rattus_norvegicus
ENSORLG00020004611smarca4a10085.775ENSRBIG00000038696SMARCA49985.845Rhinopithecus_bieti
ENSORLG00020004611smarca4a10085.775ENSRROG00000045509SMARCA410085.845Rhinopithecus_roxellana
ENSORLG00020004611smarca4a10085.601ENSSBOG00000026896SMARCA49689.218Saimiri_boliviensis_boliviensis
ENSORLG00020004611smarca4a10086.116ENSSHAG00000001642SMARCA49685.986Sarcophilus_harrisii
ENSORLG00020004611smarca4a9989.653ENSSFOG00015013823smarca49989.343Scleropages_formosus
ENSORLG00020004611smarca4a9684.281ENSSFOG00015009921-9289.978Scleropages_formosus
ENSORLG00020004611smarca4a10081.688ENSSMAG00000014082-9681.130Scophthalmus_maximus
ENSORLG00020004611smarca4a10092.462ENSSMAG00000003200smarca4a10092.097Scophthalmus_maximus
ENSORLG00020004611smarca4a10088.657ENSSDUG00000017298smarca4a10088.304Seriola_dumerili
ENSORLG00020004611smarca4a9986.273ENSSDUG00000005388-9284.738Seriola_dumerili
ENSORLG00020004611smarca4a10093.187ENSSLDG00000024486smarca4a10092.762Seriola_lalandi_dorsalis
ENSORLG00020004611smarca4a9984.042ENSSLDG00000023663-9386.212Seriola_lalandi_dorsalis
ENSORLG00020004611smarca4a6296.273ENSSARG00000013477SMARCA48296.273Sorex_araneus
ENSORLG00020004611smarca4a9980.055ENSSPUG00000004558SMARCA49882.289Sphenodon_punctatus
ENSORLG00020004611smarca4a9985.827ENSSPAG00000012533-9780.923Stegastes_partitus
ENSORLG00020004611smarca4a10092.822ENSSPAG00000004248smarca4a10092.336Stegastes_partitus
ENSORLG00020004611smarca4a10085.619ENSSSCG00000013629SMARCA410085.688Sus_scrofa
ENSORLG00020004611smarca4a6183.353ENSTGUG00000015488-9883.690Taeniopygia_guttata
ENSORLG00020004611smarca4a9985.393ENSTRUG00000004885smarca4a10085.167Takifugu_rubripes
ENSORLG00020004611smarca4a9979.892ENSTRUG00000001378SMARCA49482.772Takifugu_rubripes
ENSORLG00020004611smarca4a7392.171ENSTNIG00000004859-10092.171Tetraodon_nigroviridis
ENSORLG00020004611smarca4a10082.691ENSTNIG00000004536SMARCA49682.529Tetraodon_nigroviridis
ENSORLG00020004611smarca4a10082.924ENSTTRG00000009519SMARCA410082.635Tursiops_truncatus
ENSORLG00020004611smarca4a10085.775ENSUAMG00000014661SMARCA410085.845Ursus_americanus
ENSORLG00020004611smarca4a9985.332ENSUMAG00000022005SMARCA49790.337Ursus_maritimus
ENSORLG00020004611smarca4a10085.714ENSVVUG00000017820SMARCA49785.784Vulpes_vulpes
ENSORLG00020004611smarca4a10082.020ENSXETG00000009355smarca49780.899Xenopus_tropicalis
ENSORLG00020004611smarca4a9985.663ENSXCOG00000013494-9482.513Xiphophorus_couchianus
ENSORLG00020004611smarca4a10091.121ENSXMAG00000006321smarca4a10091.733Xiphophorus_maculatus
ENSORLG00020004611smarca4a9985.018ENSXMAG00000007030-9683.791Xiphophorus_maculatus

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