EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020004634 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: tyrosyl-DNA phosphodiesterase 2
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 5567 bases
Position: chr2:9547643-9553209
Accession: 101169669
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020003822	Exo_endo_phos	PF03372.23	1.2e-07	1	1
ENSORLP00020003829	Exo_endo_phos	PF03372.23	1.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020008998	-	822	-	ENSORLP00020003822	273 (aa)	-	-
ENSORLT00020008987	-	885	XM_023949747	ENSORLP00020003829	294 (aa)	XP_023805515	-

Gene Model

Click here to download ENSORLG00020004634's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020004634's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020004634	-	97	48.315	ENSG00000111802	TDP2	87	48.315	Homo_sapiens
ENSORLG00020004634	-	95	71.429	ENSAPOG00000018379	-	91	71.429	Acanthochromis_polyacanthus
ENSORLG00020004634	-	96	46.591	ENSAMEG00000010230	TDP2	93	46.591	Ailuropoda_melanoleuca
ENSORLG00020004634	-	61	72.892	ENSAOCG00000010081	-	86	65.641	Amphiprion_ocellaris
ENSORLG00020004634	-	93	69.804	ENSAPEG00000004208	-	91	69.804	Amphiprion_percula
ENSORLG00020004634	-	100	64.835	ENSATEG00000010663	-	91	64.413	Anabas_testudineus
ENSORLG00020004634	-	99	49.451	ENSACAG00000002332	TDP2	74	49.451	Anolis_carolinensis
ENSORLG00020004634	-	98	48.708	ENSANAG00000020033	TDP2	74	48.708	Aotus_nancymaae
ENSORLG00020004634	-	99	58.736	ENSACLG00000016174	tdp2b	91	58.736	Astatotilapia_calliptera
ENSORLG00020004634	-	99	57.407	ENSACLG00000016132	tdp2b	91	57.407	Astatotilapia_calliptera
ENSORLG00020004634	-	93	61.569	ENSACLG00000016148	tdp2b	94	58.545	Astatotilapia_calliptera
ENSORLG00020004634	-	98	49.815	ENSAMXG00000036549	tdp2a	84	49.815	Astyanax_mexicanus
ENSORLG00020004634	-	96	54.417	ENSAMXG00000011775	tdp2b	72	54.417	Astyanax_mexicanus
ENSORLG00020004634	-	96	46.970	ENSBTAG00000000365	TDP2	72	46.970	Bos_taurus
ENSORLG00020004634	-	91	31.621	WBGene00013405	tdpt-1	67	32.016	Caenorhabditis_elegans
ENSORLG00020004634	-	97	49.248	ENSCJAG00000006074	TDP2	86	49.621	Callithrix_jacchus
ENSORLG00020004634	-	97	48.496	ENSCJAG00000021963	-	73	48.496	Callithrix_jacchus
ENSORLG00020004634	-	96	46.970	ENSCAFG00000010428	TDP2	90	46.970	Canis_familiaris
ENSORLG00020004634	-	96	46.970	ENSCAFG00020009994	TDP2	90	46.970	Canis_lupus_dingo
ENSORLG00020004634	-	95	48.462	ENSCHIG00000015294	-	91	45.357	Capra_hircus
ENSORLG00020004634	-	94	47.287	ENSTSYG00000037199	TDP2	83	47.287	Carlito_syrichta
ENSORLG00020004634	-	96	49.242	ENSCPOG00000006390	TDP2	73	49.242	Cavia_porcellus
ENSORLG00020004634	-	96	49.621	ENSCCAG00000022734	TDP2	86	49.621	Cebus_capucinus
ENSORLG00020004634	-	97	47.940	ENSCATG00000022076	TDP2	87	47.940	Cercocebus_atys
ENSORLG00020004634	-	96	47.727	ENSCLAG00000002072	TDP2	73	47.727	Chinchilla_lanigera
ENSORLG00020004634	-	97	48.302	ENSCSAG00000007769	TDP2	73	48.302	Chlorocebus_sabaeus
ENSORLG00020004634	-	98	50.368	ENSCPBG00000006551	TDP2	69	50.368	Chrysemys_picta_bellii
ENSORLG00020004634	-	97	48.315	ENSCANG00000040122	TDP2	87	48.315	Colobus_angolensis_palliatus
ENSORLG00020004634	-	93	48.235	ENSCGRG00001000384	Tdp2	68	48.235	Cricetulus_griseus_chok1gshd
ENSORLG00020004634	-	93	48.235	ENSCGRG00000010250	Tdp2	72	48.235	Cricetulus_griseus_crigri
ENSORLG00020004634	-	94	60.700	ENSCVAG00000003114	tdp2b	71	60.700	Cyprinodon_variegatus
ENSORLG00020004634	-	94	56.202	ENSDARG00000035954	tdp2b	73	53.004	Danio_rerio
ENSORLG00020004634	-	99	47.794	ENSDARG00000069941	tdp2a	59	47.794	Danio_rerio
ENSORLG00020004634	-	96	48.485	ENSDNOG00000044082	TDP2	71	48.485	Dasypus_novemcinctus
ENSORLG00020004634	-	96	49.242	ENSETEG00000019096	TDP2	94	49.242	Echinops_telfairi
ENSORLG00020004634	-	90	43.145	ENSEBUG00000006535	tdp2a	59	42.292	Eptatretus_burgeri
ENSORLG00020004634	-	94	46.899	ENSEASG00005007656	TDP2	70	46.899	Equus_asinus_asinus
ENSORLG00020004634	-	96	46.212	ENSECAG00000014264	TDP2	72	46.212	Equus_caballus
ENSORLG00020004634	-	99	46.691	ENSEEUG00000010776	TDP2	80	44.792	Erinaceus_europaeus
ENSORLG00020004634	-	93	58.984	ENSELUG00000016449	tdp2b	75	54.704	Esox_lucius
ENSORLG00020004634	-	100	48.375	ENSELUG00000009321	tdp2a	84	47.810	Esox_lucius
ENSORLG00020004634	-	96	46.212	ENSFCAG00000025612	TDP2	72	46.212	Felis_catus
ENSORLG00020004634	-	98	50.000	ENSFALG00000004710	TDP2	75	50.368	Ficedula_albicollis
ENSORLG00020004634	-	98	47.970	ENSFDAG00000006512	TDP2	92	47.970	Fukomys_damarensis
ENSORLG00020004634	-	99	68.635	ENSFHEG00000013560	-	93	68.635	Fundulus_heteroclitus
ENSORLG00020004634	-	98	50.000	ENSGALG00000013637	TDP2	72	50.000	Gallus_gallus
ENSORLG00020004634	-	96	50.000	ENSGAGG00000002853	TDP2	69	49.265	Gopherus_agassizii
ENSORLG00020004634	-	97	48.315	ENSGGOG00000014237	TDP2	87	48.315	Gorilla_gorilla
ENSORLG00020004634	-	99	59.630	ENSHBUG00000002714	tdp2b	74	59.630	Haplochromis_burtoni
ENSORLG00020004634	-	78	58.879	ENSHBUG00000005421	-	89	58.879	Haplochromis_burtoni
ENSORLG00020004634	-	93	48.047	ENSHGLG00000008655	TDP2	71	48.047	Heterocephalus_glaber_female
ENSORLG00020004634	-	93	48.047	ENSHGLG00100019087	TDP2	71	48.047	Heterocephalus_glaber_male
ENSORLG00020004634	-	94	54.864	ENSIPUG00000013691	tdp2b	72	51.590	Ictalurus_punctatus
ENSORLG00020004634	-	93	46.850	ENSJJAG00000021685	Tdp2	72	46.850	Jaculus_jaculus
ENSORLG00020004634	-	95	74.615	ENSKMAG00000015485	-	84	74.615	Kryptolebias_marmoratus
ENSORLG00020004634	-	97	51.111	ENSLACG00000008852	TDP2	73	51.111	Latimeria_chalumnae
ENSORLG00020004634	-	93	54.688	ENSLOCG00000005817	tdp2b	91	54.688	Lepisosteus_oculatus
ENSORLG00020004634	-	96	48.864	ENSLAFG00000002567	TDP2	74	48.864	Loxodonta_africana
ENSORLG00020004634	-	97	47.940	ENSMFAG00000045296	TDP2	87	47.940	Macaca_fascicularis
ENSORLG00020004634	-	97	47.940	ENSMMUG00000009803	TDP2	74	47.940	Macaca_mulatta
ENSORLG00020004634	-	97	47.940	ENSMNEG00000038003	TDP2	87	47.940	Macaca_nemestrina
ENSORLG00020004634	-	97	47.940	ENSMLEG00000028883	TDP2	87	47.940	Mandrillus_leucophaeus
ENSORLG00020004634	-	99	58.456	ENSMAMG00000013654	tdp2b	75	58.456	Mastacembelus_armatus
ENSORLG00020004634	-	100	60.073	ENSMZEG00005004077	tdp2b	92	60.073	Maylandia_zebra
ENSORLG00020004634	-	84	54.585	ENSMZEG00005003980	-	74	54.585	Maylandia_zebra
ENSORLG00020004634	-	99	58.889	ENSMZEG00005003950	tdp2b	74	58.889	Maylandia_zebra
ENSORLG00020004634	-	99	58.736	ENSMZEG00005004126	tdp2b	92	58.736	Maylandia_zebra
ENSORLG00020004634	-	92	57.769	ENSMZEG00005004055	tdp2b	83	57.769	Maylandia_zebra
ENSORLG00020004634	-	99	58.889	ENSMZEG00005004153	tdp2b	95	58.889	Maylandia_zebra
ENSORLG00020004634	-	98	54.307	ENSMZEG00005004103	tdp2b	89	54.307	Maylandia_zebra
ENSORLG00020004634	-	98	49.814	ENSMGAG00000008014	TDP2	78	47.751	Meleagris_gallopavo
ENSORLG00020004634	-	93	47.451	ENSMAUG00000014451	Tdp2	68	47.451	Mesocricetus_auratus
ENSORLG00020004634	-	96	48.106	ENSMICG00000000039	TDP2	88	48.106	Microcebus_murinus
ENSORLG00020004634	-	94	49.027	ENSMOCG00000002823	Tdp2	68	49.027	Microtus_ochrogaster
ENSORLG00020004634	-	83	50.000	ENSMODG00000011653	TDP2	69	50.000	Monodelphis_domestica
ENSORLG00020004634	-	97	67.159	ENSMALG00000005368	-	92	67.159	Monopterus_albus
ENSORLG00020004634	-	94	50.195	MGP_CAROLIEiJ_G0018354	Tdp2	68	50.195	Mus_caroli
ENSORLG00020004634	-	94	50.195	ENSMUSG00000035958	Tdp2	68	50.195	Mus_musculus
ENSORLG00020004634	-	94	48.249	MGP_PahariEiJ_G0019417	Tdp2	68	48.249	Mus_pahari
ENSORLG00020004634	-	94	49.416	MGP_SPRETEiJ_G0019220	Tdp2	68	49.416	Mus_spretus
ENSORLG00020004634	-	96	46.591	ENSMPUG00000004516	TDP2	73	46.591	Mustela_putorius_furo
ENSORLG00020004634	-	96	44.326	ENSMLUG00000013506	TDP2	76	44.326	Myotis_lucifugus
ENSORLG00020004634	-	93	47.638	ENSNGAG00000001375	Tdp2	68	47.638	Nannospalax_galili
ENSORLG00020004634	-	97	48.315	ENSNLEG00000002447	TDP2	84	48.315	Nomascus_leucogenys
ENSORLG00020004634	-	98	47.955	ENSOPRG00000016299	TDP2	77	47.955	Ochotona_princeps
ENSORLG00020004634	-	96	48.855	ENSODEG00000014018	TDP2	88	48.855	Octodon_degus
ENSORLG00020004634	-	94	48.837	ENSOCUG00000013773	TDP2	71	48.837	Oryctolagus_cuniculus
ENSORLG00020004634	-	100	99.267	ENSORLG00000001661	-	100	99.267	Oryzias_latipes
ENSORLG00020004634	-	100	84.672	ENSORLG00015008190	-	100	84.672	Oryzias_latipes_hsok
ENSORLG00020004634	-	99	81.985	ENSOMEG00000015899	-	94	83.071	Oryzias_melastigma
ENSORLG00020004634	-	96	47.727	ENSOGAG00000025303	TDP2	71	47.727	Otolemur_garnettii
ENSORLG00020004634	-	97	48.315	ENSPPAG00000029023	TDP2	87	48.315	Pan_paniscus
ENSORLG00020004634	-	96	45.455	ENSPPRG00000015398	TDP2	72	45.455	Panthera_pardus
ENSORLG00020004634	-	96	45.455	ENSPTIG00000018574	TDP2	89	45.455	Panthera_tigris_altaica
ENSORLG00020004634	-	97	48.315	ENSPTRG00000017778	TDP2	87	48.315	Pan_troglodytes
ENSORLG00020004634	-	96	48.473	ENSPANG00000017590	TDP2	91	46.341	Papio_anubis
ENSORLG00020004634	-	98	55.390	ENSPKIG00000006483	tdp2b	75	53.873	Paramormyrops_kingsleyae
ENSORLG00020004634	-	98	49.627	ENSPSIG00000004948	TDP2	93	48.897	Pelodiscus_sinensis
ENSORLG00020004634	-	93	49.020	ENSPEMG00000001788	Tdp2	68	49.020	Peromyscus_maniculatus_bairdii
ENSORLG00020004634	-	93	40.149	ENSPMAG00000001570	tdp2b	97	40.672	Petromyzon_marinus
ENSORLG00020004634	-	96	48.485	ENSPCIG00000007316	TDP2	67	49.421	Phascolarctos_cinereus
ENSORLG00020004634	-	92	71.429	ENSPFOG00000017990	-	91	71.429	Poecilia_formosa
ENSORLG00020004634	-	92	70.635	ENSPLAG00000019439	-	80	70.635	Poecilia_latipinna
ENSORLG00020004634	-	92	71.825	ENSPMEG00000010824	-	91	68.030	Poecilia_mexicana
ENSORLG00020004634	-	97	47.940	ENSPPYG00000016282	TDP2	67	47.940	Pongo_abelii
ENSORLG00020004634	-	96	47.348	ENSPCOG00000021415	TDP2	92	47.348	Propithecus_coquereli
ENSORLG00020004634	-	99	59.630	ENSPNYG00000011532	tdp2b	74	59.630	Pundamilia_nyererei
ENSORLG00020004634	-	65	54.237	ENSPNYG00000001944	-	69	56.548	Pundamilia_nyererei
ENSORLG00020004634	-	99	55.594	ENSPNYG00000011504	tdp2b	93	55.594	Pundamilia_nyererei
ENSORLG00020004634	-	92	55.731	ENSPNAG00000022162	tdp2a	64	55.731	Pygocentrus_nattereri
ENSORLG00020004634	-	94	49.027	ENSRNOG00000018246	Tdp2	69	49.027	Rattus_norvegicus
ENSORLG00020004634	-	97	48.315	ENSRBIG00000037119	TDP2	87	48.315	Rhinopithecus_bieti
ENSORLG00020004634	-	97	48.315	ENSRROG00000005025	TDP2	87	48.315	Rhinopithecus_roxellana
ENSORLG00020004634	-	96	48.485	ENSSBOG00000028734	TDP2	86	48.485	Saimiri_boliviensis_boliviensis
ENSORLG00020004634	-	92	52.569	ENSSHAG00000002506	TDP2	67	52.569	Sarcophilus_harrisii
ENSORLG00020004634	-	94	55.469	ENSSFOG00015011322	-	72	55.469	Scleropages_formosus
ENSORLG00020004634	-	94	48.450	ENSSARG00000013547	TDP2	91	48.450	Sorex_araneus
ENSORLG00020004634	-	92	50.198	ENSSPUG00000008288	TDP2	68	50.198	Sphenodon_punctatus
ENSORLG00020004634	-	98	45.756	ENSSSCG00000001092	TDP2	74	45.756	Sus_scrofa
ENSORLG00020004634	-	95	50.193	ENSTGUG00000009035	TDP2	98	50.193	Taeniopygia_guttata
ENSORLG00020004634	-	97	60.606	ENSTRUG00000014347	tdp2b	73	60.606	Takifugu_rubripes
ENSORLG00020004634	-	96	63.498	ENSTRUG00000012218	-	92	63.498	Takifugu_rubripes
ENSORLG00020004634	-	95	64.231	ENSTNIG00000010260	TDP2	99	64.231	Tetraodon_nigroviridis
ENSORLG00020004634	-	95	61.240	ENSTNIG00000017792	tdp2b	71	61.240	Tetraodon_nigroviridis
ENSORLG00020004634	-	95	48.077	ENSTTRG00000016376	TDP2	75	46.520	Tursiops_truncatus
ENSORLG00020004634	-	96	46.970	ENSUAMG00000025939	TDP2	75	46.970	Ursus_americanus
ENSORLG00020004634	-	98	45.139	ENSUMAG00000020111	TDP2	87	46.970	Ursus_maritimus
ENSORLG00020004634	-	99	48.905	ENSXETG00000014826	tdp2	72	49.815	Xenopus_tropicalis
ENSORLG00020004634	-	92	71.825	ENSXCOG00000010778	-	70	71.825	Xiphophorus_couchianus
ENSORLG00020004634	-	92	71.825	ENSXMAG00000022252	-	73	71.825	Xiphophorus_maculatus