EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020004678 (Gene tree)
Gene ID: -
Gene Symbol: fbxo18
Alias: -
Full Name: F-box DNA helicase 1
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 20664 bases
Position: chr23:2627061-2647724
Accession: ZDB-GENE-041210-99
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020003864	UvrD-helicase	PF00580.21	2e-10	1	1
ENSORLP00020023673	UvrD-helicase	PF00580.21	2.8e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020008939	-	4369	-	ENSORLP00020003864	1120 (aa)	-	-
ENSORLT00020008910	-	4574	-	ENSORLP00020023673	1070 (aa)	-	-

Gene Model

Click here to download ENSORLG00020004678's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020004678's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020004678	fbxo18	97	41.088	ENSG00000134452	FBH1	97	41.143	Homo_sapiens
ENSORLG00020004678	fbxo18	99	63.500	ENSAPOG00000007042	fbxo18	99	63.227	Acanthochromis_polyacanthus
ENSORLG00020004678	fbxo18	97	41.525	ENSAMEG00000002043	FBH1	97	41.360	Ailuropoda_melanoleuca
ENSORLG00020004678	fbxo18	98	56.926	ENSACIG00000006171	fbxo18	96	65.306	Amphilophus_citrinellus
ENSORLG00020004678	fbxo18	99	63.364	ENSAOCG00000014826	fbxo18	99	63.178	Amphiprion_ocellaris
ENSORLG00020004678	fbxo18	99	62.966	ENSAPEG00000022846	fbxo18	99	62.500	Amphiprion_percula
ENSORLG00020004678	fbxo18	99	60.148	ENSATEG00000004547	fbxo18	99	59.647	Anabas_testudineus
ENSORLG00020004678	fbxo18	96	37.876	ENSAPLG00000009754	FBH1	83	41.399	Anas_platyrhynchos
ENSORLG00020004678	fbxo18	81	42.665	ENSACAG00000002729	FBH1	82	42.665	Anolis_carolinensis
ENSORLG00020004678	fbxo18	97	40.883	ENSANAG00000032436	FBH1	97	40.883	Aotus_nancymaae
ENSORLG00020004678	fbxo18	99	61.270	ENSACLG00000004266	fbxo18	99	62.360	Astatotilapia_calliptera
ENSORLG00020004678	fbxo18	72	53.402	ENSAMXG00000020772	fbxo18	92	49.554	Astyanax_mexicanus
ENSORLG00020004678	fbxo18	97	40.467	ENSBTAG00000004147	FBH1	79	45.316	Bos_taurus
ENSORLG00020004678	fbxo18	97	41.566	ENSCJAG00000020531	FBH1	97	41.353	Callithrix_jacchus
ENSORLG00020004678	fbxo18	82	43.933	ENSCAFG00000005218	FBH1	88	44.270	Canis_familiaris
ENSORLG00020004678	fbxo18	82	43.933	ENSCAFG00020005396	FBH1	88	44.270	Canis_lupus_dingo
ENSORLG00020004678	fbxo18	97	40.751	ENSCHIG00000016303	FBH1	79	45.785	Capra_hircus
ENSORLG00020004678	fbxo18	97	38.873	ENSCPOG00000010580	FBH1	78	43.381	Cavia_porcellus
ENSORLG00020004678	fbxo18	97	41.604	ENSCCAG00000023218	FBH1	97	41.376	Cebus_capucinus
ENSORLG00020004678	fbxo18	97	36.106	ENSCATG00000035430	FBH1	86	46.120	Cercocebus_atys
ENSORLG00020004678	fbxo18	97	40.376	ENSCLAG00000008089	FBH1	82	44.045	Chinchilla_lanigera
ENSORLG00020004678	fbxo18	78	45.188	ENSCSAG00000013644	FBH1	85	45.188	Chlorocebus_sabaeus
ENSORLG00020004678	fbxo18	98	37.672	ENSCPBG00000019260	FBH1	99	37.082	Chrysemys_picta_bellii
ENSORLG00020004678	fbxo18	97	41.337	ENSCANG00000023461	FBH1	97	41.243	Colobus_angolensis_palliatus
ENSORLG00020004678	fbxo18	97	40.093	ENSCGRG00001018795	Fbh1	97	40.000	Cricetulus_griseus_chok1gshd
ENSORLG00020004678	fbxo18	97	40.093	ENSCGRG00000008471	Fbh1	97	40.000	Cricetulus_griseus_crigri
ENSORLG00020004678	fbxo18	70	61.290	ENSCSEG00000018212	fbxo18	82	57.803	Cynoglossus_semilaevis
ENSORLG00020004678	fbxo18	84	64.784	ENSCVAG00000006828	fbxo18	99	63.036	Cyprinodon_variegatus
ENSORLG00020004678	fbxo18	98	45.857	ENSDARG00000062983	fbxo18	97	46.045	Danio_rerio
ENSORLG00020004678	fbxo18	97	41.050	ENSETEG00000019856	FBH1	96	40.811	Echinops_telfairi
ENSORLG00020004678	fbxo18	97	41.033	ENSEASG00005019192	FBH1	97	41.315	Equus_asinus_asinus
ENSORLG00020004678	fbxo18	97	41.033	ENSECAG00000006839	FBH1	97	41.315	Equus_caballus
ENSORLG00020004678	fbxo18	65	48.331	ENSEEUG00000000461	FBH1	70	48.331	Erinaceus_europaeus
ENSORLG00020004678	fbxo18	97	49.953	ENSELUG00000006556	fbxo18	97	50.283	Esox_lucius
ENSORLG00020004678	fbxo18	97	41.486	ENSFCAG00000009004	FBH1	95	41.154	Felis_catus
ENSORLG00020004678	fbxo18	97	40.786	ENSFDAG00000009830	FBH1	97	40.862	Fukomys_damarensis
ENSORLG00020004678	fbxo18	99	64.700	ENSFHEG00000007533	fbxo18	99	64.607	Fundulus_heteroclitus
ENSORLG00020004678	fbxo18	90	52.267	ENSGMOG00000010594	-	92	51.647	Gadus_morhua
ENSORLG00020004678	fbxo18	97	39.252	ENSGALG00000008162	FBH1	83	42.923	Gallus_gallus
ENSORLG00020004678	fbxo18	99	64.346	ENSGAFG00000004166	fbxo18	98	64.346	Gambusia_affinis
ENSORLG00020004678	fbxo18	99	60.353	ENSGACG00000019171	fbxo18	99	60.242	Gasterosteus_aculeatus
ENSORLG00020004678	fbxo18	98	39.576	ENSGAGG00000021773	FBH1	98	39.500	Gopherus_agassizii
ENSORLG00020004678	fbxo18	97	41.188	ENSGGOG00000013326	FBXO18	97	41.093	Gorilla_gorilla
ENSORLG00020004678	fbxo18	99	61.142	ENSHBUG00000016673	fbxo18	99	62.360	Haplochromis_burtoni
ENSORLG00020004678	fbxo18	97	40.467	ENSHGLG00000015581	FBXO18	97	40.280	Heterocephalus_glaber_female
ENSORLG00020004678	fbxo18	97	40.467	ENSHGLG00100009896	FBXO18	97	40.280	Heterocephalus_glaber_male
ENSORLG00020004678	fbxo18	66	65.455	ENSHCOG00000010937	-	73	65.455	Hippocampus_comes
ENSORLG00020004678	fbxo18	90	49.022	ENSIPUG00000019144	fbxo18	96	48.919	Ictalurus_punctatus
ENSORLG00020004678	fbxo18	97	40.888	ENSSTOG00000006496	FBH1	82	44.645	Ictidomys_tridecemlineatus
ENSORLG00020004678	fbxo18	99	66.202	ENSKMAG00000021437	fbxo18	99	63.475	Kryptolebias_marmoratus
ENSORLG00020004678	fbxo18	100	62.420	ENSLBEG00000023717	fbxo18	100	62.192	Labrus_bergylta
ENSORLG00020004678	fbxo18	58	38.176	ENSLACG00000013504	FBH1	78	38.661	Latimeria_chalumnae
ENSORLG00020004678	fbxo18	97	43.958	ENSLOCG00000015655	fbxo18	92	48.649	Lepisosteus_oculatus
ENSORLG00020004678	fbxo18	97	40.657	ENSLAFG00000013105	FBH1	82	43.897	Loxodonta_africana
ENSORLG00020004678	fbxo18	97	41.282	ENSMMUG00000015143	FBH1	97	41.188	Macaca_mulatta
ENSORLG00020004678	fbxo18	97	41.188	ENSMNEG00000043475	FBH1	97	41.093	Macaca_nemestrina
ENSORLG00020004678	fbxo18	97	41.243	ENSMLEG00000035307	FBH1	97	41.149	Mandrillus_leucophaeus
ENSORLG00020004678	fbxo18	99	60.434	ENSMAMG00000000527	fbxo18	99	60.989	Mastacembelus_armatus
ENSORLG00020004678	fbxo18	99	61.362	ENSMZEG00005015202	fbxo18	99	62.453	Maylandia_zebra
ENSORLG00020004678	fbxo18	90	40.120	ENSMGAG00000003231	FBH1	99	39.679	Meleagris_gallopavo
ENSORLG00020004678	fbxo18	97	41.204	ENSMICG00000009646	FBH1	93	44.970	Microcebus_murinus
ENSORLG00020004678	fbxo18	99	54.221	ENSMMOG00000010268	fbxo18	97	58.550	Mola_mola
ENSORLG00020004678	fbxo18	79	43.931	ENSMODG00000018516	FBH1	86	43.931	Monodelphis_domestica
ENSORLG00020004678	fbxo18	100	61.326	ENSMALG00000010440	fbxo18	99	60.958	Monopterus_albus
ENSORLG00020004678	fbxo18	97	40.490	MGP_CAROLIEiJ_G0023178	Fbh1	97	40.490	Mus_caroli
ENSORLG00020004678	fbxo18	97	40.543	ENSMUSG00000058594	Fbh1	97	40.922	Mus_musculus
ENSORLG00020004678	fbxo18	97	40.528	MGP_PahariEiJ_G0019237	Fbh1	97	40.584	Mus_pahari
ENSORLG00020004678	fbxo18	97	40.528	MGP_SPRETEiJ_G0024095	Fbh1	97	40.716	Mus_spretus
ENSORLG00020004678	fbxo18	97	40.909	ENSMPUG00000016343	FBH1	97	41.193	Mustela_putorius_furo
ENSORLG00020004678	fbxo18	97	38.920	ENSMLUG00000000133	FBH1	97	38.361	Myotis_lucifugus
ENSORLG00020004678	fbxo18	98	55.305	ENSNBRG00000018212	fbxo18	98	59.783	Neolamprologus_brichardi
ENSORLG00020004678	fbxo18	97	41.292	ENSNLEG00000011537	FBH1	97	41.353	Nomascus_leucogenys
ENSORLG00020004678	fbxo18	97	38.598	ENSOPRG00000002898	FBH1	79	42.316	Ochotona_princeps
ENSORLG00020004678	fbxo18	97	40.789	ENSODEG00000004201	FBH1	97	40.939	Octodon_degus
ENSORLG00020004678	fbxo18	99	62.921	ENSONIG00000011830	fbxo18	98	66.047	Oreochromis_niloticus
ENSORLG00020004678	fbxo18	97	39.496	ENSOANG00000015459	FBH1	82	43.779	Ornithorhynchus_anatinus
ENSORLG00020004678	fbxo18	97	40.973	ENSOCUG00000006237	FBH1	97	41.011	Oryctolagus_cuniculus
ENSORLG00020004678	fbxo18	100	98.598	ENSORLG00000026493	fbxo18	100	98.598	Oryzias_latipes
ENSORLG00020004678	fbxo18	100	97.761	ENSORLG00015001917	fbxo18	100	97.761	Oryzias_latipes_hsok
ENSORLG00020004678	fbxo18	100	84.451	ENSOMEG00000011975	fbxo18	100	84.451	Oryzias_melastigma
ENSORLG00020004678	fbxo18	97	39.546	ENSOGAG00000015682	FBH1	79	44.653	Otolemur_garnettii
ENSORLG00020004678	fbxo18	97	40.563	ENSOARG00000012605	FBH1	79	45.667	Ovis_aries
ENSORLG00020004678	fbxo18	97	41.470	ENSPPAG00000043946	FBH1	97	41.470	Pan_paniscus
ENSORLG00020004678	fbxo18	97	41.580	ENSPPRG00000009687	FBH1	94	41.249	Panthera_pardus
ENSORLG00020004678	fbxo18	97	41.463	ENSPTIG00000020396	FBH1	94	41.321	Panthera_tigris_altaica
ENSORLG00020004678	fbxo18	97	41.282	ENSPTRG00000002261	FBH1	97	41.282	Pan_troglodytes
ENSORLG00020004678	fbxo18	97	41.243	ENSPANG00000023427	FBH1	97	41.149	Papio_anubis
ENSORLG00020004678	fbxo18	97	39.888	ENSPSIG00000013802	FBH1	81	43.448	Pelodiscus_sinensis
ENSORLG00020004678	fbxo18	97	40.169	ENSPEMG00000023309	Fbh1	97	40.452	Peromyscus_maniculatus_bairdii
ENSORLG00020004678	fbxo18	97	40.379	ENSPCIG00000023460	FBH1	83	43.891	Phascolarctos_cinereus
ENSORLG00020004678	fbxo18	99	64.192	ENSPFOG00000005889	fbxo18	98	64.192	Poecilia_formosa
ENSORLG00020004678	fbxo18	99	64.440	ENSPLAG00000014934	fbxo18	98	64.440	Poecilia_latipinna
ENSORLG00020004678	fbxo18	99	64.286	ENSPMEG00000021117	fbxo18	98	64.286	Poecilia_mexicana
ENSORLG00020004678	fbxo18	64	65.946	ENSPREG00000017674	fbxo18	82	61.523	Poecilia_reticulata
ENSORLG00020004678	fbxo18	96	40.892	ENSPPYG00000002064	FBH1	99	40.853	Pongo_abelii
ENSORLG00020004678	fbxo18	97	37.326	ENSPCAG00000013584	FBH1	93	37.734	Procavia_capensis
ENSORLG00020004678	fbxo18	97	39.036	ENSPCOG00000011617	FBH1	93	39.036	Propithecus_coquereli
ENSORLG00020004678	fbxo18	97	39.736	ENSPVAG00000007082	FBH1	94	40.397	Pteropus_vampyrus
ENSORLG00020004678	fbxo18	80	65.025	ENSPNYG00000015327	fbxo18	98	53.270	Pundamilia_nyererei
ENSORLG00020004678	fbxo18	76	38.078	ENSPNAG00000001339	-	92	38.078	Pygocentrus_nattereri
ENSORLG00020004678	fbxo18	98	45.338	ENSPNAG00000008968	fbxo18	97	45.064	Pygocentrus_nattereri
ENSORLG00020004678	fbxo18	97	40.769	ENSRNOG00000018549	Fbh1	97	41.298	Rattus_norvegicus
ENSORLG00020004678	fbxo18	97	41.149	ENSRBIG00000038238	FBH1	97	41.055	Rhinopithecus_bieti
ENSORLG00020004678	fbxo18	97	41.243	ENSRROG00000029282	FBH1	94	41.149	Rhinopithecus_roxellana
ENSORLG00020004678	fbxo18	97	41.215	ENSSBOG00000026129	FBH1	97	41.093	Saimiri_boliviensis_boliviensis
ENSORLG00020004678	fbxo18	97	44.737	ENSSFOG00015023855	fbxo18	89	47.148	Scleropages_formosus
ENSORLG00020004678	fbxo18	95	59.805	ENSSMAG00000012330	fbxo18	94	63.646	Scophthalmus_maximus
ENSORLG00020004678	fbxo18	98	58.846	ENSSDUG00000014911	fbxo18	95	63.232	Seriola_dumerili
ENSORLG00020004678	fbxo18	94	52.502	ENSSLDG00000014394	fbxo18	95	58.442	Seriola_lalandi_dorsalis
ENSORLG00020004678	fbxo18	88	44.118	ENSSPUG00000001370	FBH1	79	45.229	Sphenodon_punctatus
ENSORLG00020004678	fbxo18	99	62.956	ENSSPAG00000002282	fbxo18	99	62.956	Stegastes_partitus
ENSORLG00020004678	fbxo18	97	40.922	ENSSSCG00000030030	FBH1	80	45.064	Sus_scrofa
ENSORLG00020004678	fbxo18	79	58.508	ENSTNIG00000006893	fbxo18	99	58.508	Tetraodon_nigroviridis
ENSORLG00020004678	fbxo18	88	41.073	ENSTBEG00000003595	FBH1	85	41.225	Tupaia_belangeri
ENSORLG00020004678	fbxo18	97	39.303	ENSTTRG00000001338	FBH1	79	42.665	Tursiops_truncatus
ENSORLG00020004678	fbxo18	97	41.110	ENSUAMG00000007277	FBH1	97	41.282	Ursus_americanus
ENSORLG00020004678	fbxo18	82	44.183	ENSUMAG00000012189	FBH1	88	44.519	Ursus_maritimus
ENSORLG00020004678	fbxo18	97	40.755	ENSVVUG00000006823	FBH1	86	44.753	Vulpes_vulpes
ENSORLG00020004678	fbxo18	98	38.632	ENSXETG00000018125	fbh1	81	43.291	Xenopus_tropicalis
ENSORLG00020004678	fbxo18	99	64.158	ENSXMAG00000019200	fbxo18	98	63.440	Xiphophorus_maculatus