EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020004891 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 24731 bases
Position: chr16:19496349-19521079
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020023806	ResIII	PF04851.15	7.4e-10	1	1
ENSORLP00020023821	ResIII	PF04851.15	7.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020008522	-	11244	-	ENSORLP00020023821	1969 (aa)	-	-
ENSORLT00020008565	-	10995	-	ENSORLP00020023806	1969 (aa)	-	-

Gene Model

Click here to download ENSORLG00020004891's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020004891's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020004891	-	54	66.017	ENSORLG00020008387	chd3	94	64.779
ENSORLG00020004891	-	99	78.248	ENSORLG00020006529	chd4a	100	78.029
ENSORLG00020004891	-	73	71.488	ENSORLG00020011739	-	87	70.825

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020004891	-	92	76.721	ENSG00000111642	CHD4	99	80.252	Homo_sapiens
ENSORLG00020004891	-	92	80.227	ENSAPOG00000008935	chd4a	99	80.428	Acanthochromis_polyacanthus
ENSORLG00020004891	-	92	65.877	ENSAPOG00000020502	-	96	65.029	Acanthochromis_polyacanthus
ENSORLG00020004891	-	89	83.333	ENSAMEG00000014179	-	96	75.155	Ailuropoda_melanoleuca
ENSORLG00020004891	-	96	79.739	ENSACIG00000019310	chd4a	95	88.618	Amphilophus_citrinellus
ENSORLG00020004891	-	89	98.630	ENSACIG00000012387	-	95	98.630	Amphilophus_citrinellus
ENSORLG00020004891	-	100	89.868	ENSAOCG00000000507	-	100	89.990	Amphiprion_ocellaris
ENSORLG00020004891	-	94	82.996	ENSAOCG00000016412	-	99	82.971	Amphiprion_ocellaris
ENSORLG00020004891	-	84	80.465	ENSAPEG00000020306	-	95	64.593	Amphiprion_percula
ENSORLG00020004891	-	95	80.137	ENSAPEG00000001757	chd4a	99	80.136	Amphiprion_percula
ENSORLG00020004891	-	97	86.409	ENSAPEG00000005957	-	100	86.900	Amphiprion_percula
ENSORLG00020004891	-	92	67.194	ENSATEG00000000976	-	94	66.920	Anabas_testudineus
ENSORLG00020004891	-	99	75.200	ENSATEG00000016428	chd4a	96	86.561	Anabas_testudineus
ENSORLG00020004891	-	90	75.998	ENSAPLG00000014146	-	96	73.526	Anas_platyrhynchos
ENSORLG00020004891	-	92	76.185	ENSACAG00000006231	-	96	74.572	Anolis_carolinensis
ENSORLG00020004891	-	92	76.352	ENSANAG00000035685	-	97	76.277	Aotus_nancymaae
ENSORLG00020004891	-	96	87.539	ENSACLG00000024468	-	100	87.834	Astatotilapia_calliptera
ENSORLG00020004891	-	95	78.537	ENSACLG00000015837	chd4a	99	77.137	Astatotilapia_calliptera
ENSORLG00020004891	-	96	79.544	ENSAMXG00000010614	-	96	87.786	Astyanax_mexicanus
ENSORLG00020004891	-	96	79.241	ENSAMXG00000019969	chd4a	98	79.092	Astyanax_mexicanus
ENSORLG00020004891	-	92	76.771	ENSBTAG00000014734	CHD4	96	75.611	Bos_taurus
ENSORLG00020004891	-	92	76.310	ENSCJAG00000008114	-	96	76.238	Callithrix_jacchus
ENSORLG00020004891	-	92	76.906	ENSCHIG00000020766	-	97	75.532	Capra_hircus
ENSORLG00020004891	-	92	76.548	ENSTSYG00000006069	-	95	76.248	Carlito_syrichta
ENSORLG00020004891	-	98	73.282	ENSCPOG00000008504	-	96	75.862	Cavia_porcellus
ENSORLG00020004891	-	92	76.362	ENSCCAG00000009686	-	97	76.277	Cebus_capucinus
ENSORLG00020004891	-	92	76.483	ENSCATG00000006345	-	97	76.215	Cercocebus_atys
ENSORLG00020004891	-	92	76.509	ENSCLAG00000012244	-	96	76.096	Chinchilla_lanigera
ENSORLG00020004891	-	92	76.496	ENSCSAG00000010429	-	96	76.330	Chlorocebus_sabaeus
ENSORLG00020004891	-	71	94.690	ENSCHOG00000000277	-	77	88.976	Choloepus_hoffmanni
ENSORLG00020004891	-	95	75.504	ENSCPBG00000027716	-	92	75.182	Chrysemys_picta_bellii
ENSORLG00020004891	-	83	72.093	ENSCSAVG00000004448	-	95	74.757	Ciona_savignyi
ENSORLG00020004891	-	92	72.256	ENSCANG00000035317	-	93	78.511	Colobus_angolensis_palliatus
ENSORLG00020004891	-	92	76.303	ENSCGRG00001020662	Chd4	96	75.430	Cricetulus_griseus_chok1gshd
ENSORLG00020004891	-	92	76.632	ENSCGRG00000015920	Chd4	97	75.979	Cricetulus_griseus_crigri
ENSORLG00020004891	-	92	66.904	ENSCSEG00000018096	-	92	66.776	Cynoglossus_semilaevis
ENSORLG00020004891	-	97	86.457	ENSCSEG00000019943	-	100	86.751	Cynoglossus_semilaevis
ENSORLG00020004891	-	88	89.113	ENSCSEG00000017173	chd4a	94	88.845	Cynoglossus_semilaevis
ENSORLG00020004891	-	86	90.254	ENSCVAG00000001128	-	100	87.144	Cyprinodon_variegatus
ENSORLG00020004891	-	89	90.717	ENSCVAG00000004940	chd4a	96	90.717	Cyprinodon_variegatus
ENSORLG00020004891	-	92	66.739	ENSCVAG00000016412	-	95	65.623	Cyprinodon_variegatus
ENSORLG00020004891	-	99	76.652	ENSDARG00000063535	chd4a	100	76.652	Danio_rerio
ENSORLG00020004891	-	92	76.365	ENSDNOG00000001134	-	96	76.255	Dasypus_novemcinctus
ENSORLG00020004891	-	92	75.437	ENSDORG00000001847	Chd4	95	75.808	Dipodomys_ordii
ENSORLG00020004891	-	75	70.319	ENSEBUG00000012670	chd4a	96	70.522	Eptatretus_burgeri
ENSORLG00020004891	-	92	76.092	ENSEASG00005016150	-	96	76.400	Equus_asinus_asinus
ENSORLG00020004891	-	92	76.092	ENSECAG00000022005	CHD4	96	76.400	Equus_caballus
ENSORLG00020004891	-	85	89.243	ENSELUG00000021276	chd4a	91	86.328	Esox_lucius
ENSORLG00020004891	-	95	82.819	ENSELUG00000018086	-	99	82.799	Esox_lucius
ENSORLG00020004891	-	92	76.461	ENSFCAG00000006877	-	96	76.452	Felis_catus
ENSORLG00020004891	-	72	80.946	ENSFALG00000004785	-	92	79.145	Ficedula_albicollis
ENSORLG00020004891	-	72	78.147	ENSFDAG00000020219	-	96	74.336	Fukomys_damarensis
ENSORLG00020004891	-	89	82.557	ENSFHEG00000002013	chd4a	98	81.508	Fundulus_heteroclitus
ENSORLG00020004891	-	84	80.184	ENSFHEG00000003253	-	92	79.186	Fundulus_heteroclitus
ENSORLG00020004891	-	92	90.084	ENSFHEG00000012736	-	99	89.607	Fundulus_heteroclitus
ENSORLG00020004891	-	50	86.694	ENSGMOG00000003394	-	77	86.694	Gadus_morhua
ENSORLG00020004891	-	70	95.238	ENSGMOG00000017923	-	77	82.857	Gadus_morhua
ENSORLG00020004891	-	54	88.837	ENSGMOG00000015722	chd4a	98	84.902	Gadus_morhua
ENSORLG00020004891	-	56	78.417	ENSGALG00000013565	-	98	75.801	Gallus_gallus
ENSORLG00020004891	-	83	98.690	ENSGAFG00000014337	-	100	95.868	Gambusia_affinis
ENSORLG00020004891	-	99	76.509	ENSGAFG00000002778	chd4a	99	75.779	Gambusia_affinis
ENSORLG00020004891	-	96	75.467	ENSGACG00000018705	chd4a	99	77.694	Gasterosteus_aculeatus
ENSORLG00020004891	-	55	86.028	ENSGACG00000010099	-	98	84.156	Gasterosteus_aculeatus
ENSORLG00020004891	-	78	76.869	ENSGAGG00000001416	-	93	75.078	Gopherus_agassizii
ENSORLG00020004891	-	92	76.461	ENSGGOG00000001930	CHD4	97	76.400	Gorilla_gorilla
ENSORLG00020004891	-	89	87.427	ENSHBUG00000019146	chd4a	99	73.546	Haplochromis_burtoni
ENSORLG00020004891	-	96	88.266	ENSHBUG00000016000	-	100	88.078	Haplochromis_burtoni
ENSORLG00020004891	-	92	75.877	ENSHGLG00000003093	-	96	76.098	Heterocephalus_glaber_female
ENSORLG00020004891	-	92	75.877	ENSHGLG00100007450	-	96	76.098	Heterocephalus_glaber_male
ENSORLG00020004891	-	88	82.091	ENSHCOG00000017525	-	96	91.795	Hippocampus_comes
ENSORLG00020004891	-	73	70.850	ENSHCOG00000014308	-	88	70.165	Hippocampus_comes
ENSORLG00020004891	-	99	79.331	ENSIPUG00000005694	chd4	99	79.757	Ictalurus_punctatus
ENSORLG00020004891	-	92	76.348	ENSSTOG00000007601	-	96	76.381	Ictidomys_tridecemlineatus
ENSORLG00020004891	-	98	73.652	ENSJJAG00000012394	Chd4	96	75.853	Jaculus_jaculus
ENSORLG00020004891	-	84	79.724	ENSKMAG00000017827	-	93	78.733	Kryptolebias_marmoratus
ENSORLG00020004891	-	91	85.227	ENSKMAG00000019286	chd4a	99	85.769	Kryptolebias_marmoratus
ENSORLG00020004891	-	100	91.511	ENSKMAG00000007932	-	100	91.511	Kryptolebias_marmoratus
ENSORLG00020004891	-	99	89.758	ENSLBEG00000012434	CHD4	100	89.540	Labrus_bergylta
ENSORLG00020004891	-	78	70.635	ENSLBEG00000026652	-	95	70.383	Labrus_bergylta
ENSORLG00020004891	-	99	73.273	ENSLOCG00000007438	chd4a	99	73.619	Lepisosteus_oculatus
ENSORLG00020004891	-	92	73.859	ENSLAFG00000022842	-	96	73.354	Loxodonta_africana
ENSORLG00020004891	-	92	76.297	ENSMFAG00000003188	-	97	76.163	Macaca_fascicularis
ENSORLG00020004891	-	92	75.364	ENSMMUG00000018685	-	96	75.168	Macaca_mulatta
ENSORLG00020004891	-	92	74.386	ENSMNEG00000044776	-	97	74.516	Macaca_nemestrina
ENSORLG00020004891	-	92	74.986	ENSMLEG00000024661	-	97	74.804	Mandrillus_leucophaeus
ENSORLG00020004891	-	100	90.726	ENSMAMG00000002584	-	100	90.407	Mastacembelus_armatus
ENSORLG00020004891	-	99	78.858	ENSMAMG00000018954	chd4a	95	85.375	Mastacembelus_armatus
ENSORLG00020004891	-	85	76.419	ENSMAMG00000002137	-	89	76.419	Mastacembelus_armatus
ENSORLG00020004891	-	96	87.958	ENSMZEG00005017761	-	100	88.031	Maylandia_zebra
ENSORLG00020004891	-	99	78.796	ENSMZEG00005001706	chd4a	100	78.263	Maylandia_zebra
ENSORLG00020004891	-	92	76.641	ENSMGAG00000014084	-	96	75.338	Meleagris_gallopavo
ENSORLG00020004891	-	92	76.403	ENSMICG00000006588	-	97	76.240	Microcebus_murinus
ENSORLG00020004891	-	92	76.703	ENSMOCG00000020624	Chd4	96	76.098	Microtus_ochrogaster
ENSORLG00020004891	-	95	78.636	ENSMMOG00000000073	chd4a	100	77.982	Mola_mola
ENSORLG00020004891	-	96	85.519	ENSMMOG00000015971	-	100	84.764	Mola_mola
ENSORLG00020004891	-	73	71.064	ENSMMOG00000013429	-	86	70.145	Mola_mola
ENSORLG00020004891	-	82	78.389	ENSMODG00000018094	-	99	78.523	Monodelphis_domestica
ENSORLG00020004891	-	100	91.175	ENSMALG00000022494	-	100	91.046	Monopterus_albus
ENSORLG00020004891	-	96	73.965	ENSMALG00000005766	chd4a	96	80.249	Monopterus_albus
ENSORLG00020004891	-	92	76.513	ENSMUSG00000063870	Chd4	96	76.046	Mus_musculus
ENSORLG00020004891	-	92	76.522	MGP_SPRETEiJ_G0029911	Chd4	96	75.914	Mus_spretus
ENSORLG00020004891	-	92	76.789	ENSMPUG00000016859	-	96	76.452	Mustela_putorius_furo
ENSORLG00020004891	-	92	76.605	ENSMLUG00000014343	-	96	76.173	Myotis_lucifugus
ENSORLG00020004891	-	85	88.889	ENSNGAG00000016920	Chd4	96	74.451	Nannospalax_galili
ENSORLG00020004891	-	96	87.755	ENSNBRG00000021576	-	100	87.828	Neolamprologus_brichardi
ENSORLG00020004891	-	92	75.885	ENSNLEG00000004330	-	93	75.678	Nomascus_leucogenys
ENSORLG00020004891	-	74	96.296	ENSOPRG00000003477	-	76	96.296	Ochotona_princeps
ENSORLG00020004891	-	92	76.532	ENSODEG00000003114	-	95	76.061	Octodon_degus
ENSORLG00020004891	-	99	78.568	ENSONIG00000006992	chd4a	100	78.028	Oreochromis_niloticus
ENSORLG00020004891	-	99	89.627	ENSONIG00000012953	-	99	91.207	Oreochromis_niloticus
ENSORLG00020004891	-	95	71.943	ENSOCUG00000008215	-	95	74.870	Oryctolagus_cuniculus
ENSORLG00020004891	-	99	77.795	ENSORLG00000006310	chd4a	100	78.023	Oryzias_latipes
ENSORLG00020004891	-	100	99.543	ENSORLG00000012477	-	100	99.543	Oryzias_latipes
ENSORLG00020004891	-	85	76.395	ENSORLG00000017190	-	91	76.395	Oryzias_latipes
ENSORLG00020004891	-	100	99.644	ENSORLG00015010692	-	100	99.644	Oryzias_latipes_hsok
ENSORLG00020004891	-	99	77.744	ENSORLG00015019674	chd4a	100	77.973	Oryzias_latipes_hsok
ENSORLG00020004891	-	99	89.913	ENSOMEG00000013408	-	97	89.659	Oryzias_melastigma
ENSORLG00020004891	-	92	63.426	ENSOMEG00000014929	-	91	77.632	Oryzias_melastigma
ENSORLG00020004891	-	99	78.252	ENSOMEG00000016394	chd4a	97	87.747	Oryzias_melastigma
ENSORLG00020004891	-	92	75.256	ENSOGAG00000010031	-	96	75.349	Otolemur_garnettii
ENSORLG00020004891	-	92	76.767	ENSOARG00000007398	-	97	75.676	Ovis_aries
ENSORLG00020004891	-	92	76.419	ENSPPAG00000029007	-	96	76.360	Pan_paniscus
ENSORLG00020004891	-	92	76.375	ENSPPRG00000001388	-	96	76.138	Panthera_pardus
ENSORLG00020004891	-	92	76.461	ENSPTIG00000010979	-	96	76.452	Panthera_tigris_altaica
ENSORLG00020004891	-	92	76.461	ENSPTRG00000004580	CHD4	97	76.400	Pan_troglodytes
ENSORLG00020004891	-	92	76.253	ENSPANG00000025409	-	97	76.345	Papio_anubis
ENSORLG00020004891	-	99	81.966	ENSPKIG00000008268	chd4a	99	80.948	Paramormyrops_kingsleyae
ENSORLG00020004891	-	96	69.789	ENSPKIG00000012023	-	99	69.753	Paramormyrops_kingsleyae
ENSORLG00020004891	-	95	74.231	ENSPSIG00000015546	-	98	73.347	Pelodiscus_sinensis
ENSORLG00020004891	-	93	78.374	ENSPMGG00000022981	chd4a	97	77.971	Periophthalmus_magnuspinnatus
ENSORLG00020004891	-	79	80.723	ENSPMGG00000007681	-	94	80.723	Periophthalmus_magnuspinnatus
ENSORLG00020004891	-	85	88.889	ENSPEMG00000010290	Chd4	96	73.954	Peromyscus_maniculatus_bairdii
ENSORLG00020004891	-	99	78.672	ENSPFOG00000009089	chd4a	100	77.894	Poecilia_formosa
ENSORLG00020004891	-	86	67.134	ENSPFOG00000016981	-	92	65.872	Poecilia_formosa
ENSORLG00020004891	-	97	90.919	ENSPFOG00000013889	-	99	91.284	Poecilia_formosa
ENSORLG00020004891	-	95	78.169	ENSPLAG00000012712	chd4a	94	95.025	Poecilia_latipinna
ENSORLG00020004891	-	100	91.157	ENSPLAG00000004006	-	100	91.359	Poecilia_latipinna
ENSORLG00020004891	-	96	83.456	ENSPMEG00000006064	-	98	88.116	Poecilia_mexicana
ENSORLG00020004891	-	92	66.976	ENSPMEG00000015657	-	94	64.984	Poecilia_mexicana
ENSORLG00020004891	-	89	94.170	ENSPMEG00000009633	chd4a	93	94.170	Poecilia_mexicana
ENSORLG00020004891	-	89	65.778	ENSPREG00000014285	-	93	64.022	Poecilia_reticulata
ENSORLG00020004891	-	100	91.166	ENSPREG00000011359	-	100	91.519	Poecilia_reticulata
ENSORLG00020004891	-	86	95.025	ENSPREG00000001202	chd4a	94	95.025	Poecilia_reticulata
ENSORLG00020004891	-	92	74.878	ENSPPYG00000004192	-	97	74.714	Pongo_abelii
ENSORLG00020004891	-	72	86.747	ENSPCAG00000007120	-	83	87.048	Procavia_capensis
ENSORLG00020004891	-	92	76.690	ENSPCOG00000018635	-	97	76.136	Propithecus_coquereli
ENSORLG00020004891	-	92	75.310	ENSPVAG00000012574	-	97	74.987	Pteropus_vampyrus
ENSORLG00020004891	-	100	91.221	ENSPNYG00000023020	-	100	91.372	Pundamilia_nyererei
ENSORLG00020004891	-	95	79.089	ENSPNYG00000002663	chd4a	98	78.512	Pundamilia_nyererei
ENSORLG00020004891	-	96	79.143	ENSPNAG00000011129	-	99	78.939	Pygocentrus_nattereri
ENSORLG00020004891	-	99	80.051	ENSPNAG00000009629	chd4a	94	88.235	Pygocentrus_nattereri
ENSORLG00020004891	-	98	73.765	ENSRNOG00000018309	Chd4	96	76.136	Rattus_norvegicus
ENSORLG00020004891	-	90	75.759	ENSRBIG00000041491	-	96	75.851	Rhinopithecus_bieti
ENSORLG00020004891	-	92	76.368	ENSRROG00000042446	-	97	76.163	Rhinopithecus_roxellana
ENSORLG00020004891	-	85	87.045	ENSSBOG00000020782	-	97	76.033	Saimiri_boliviensis_boliviensis
ENSORLG00020004891	-	62	86.957	ENSSHAG00000015079	-	90	86.957	Sarcophilus_harrisii
ENSORLG00020004891	-	99	80.845	ENSSFOG00015002908	chd4	97	89.328	Scleropages_formosus
ENSORLG00020004891	-	96	86.530	ENSSMAG00000010969	-	99	86.482	Scophthalmus_maximus
ENSORLG00020004891	-	89	96.635	ENSSMAG00000012594	chd4a	99	78.236	Scophthalmus_maximus
ENSORLG00020004891	-	92	65.011	ENSSMAG00000017926	-	77	67.324	Scophthalmus_maximus
ENSORLG00020004891	-	94	91.362	ENSSDUG00000012051	-	99	90.904	Seriola_dumerili
ENSORLG00020004891	-	87	95.413	ENSSDUG00000002891	chd4a	97	79.365	Seriola_dumerili
ENSORLG00020004891	-	84	92.920	ENSSLDG00000018645	chd4a	98	76.356	Seriola_lalandi_dorsalis
ENSORLG00020004891	-	93	66.866	ENSSLDG00000019750	-	89	77.293	Seriola_lalandi_dorsalis
ENSORLG00020004891	-	88	95.775	ENSSLDG00000023821	-	98	94.318	Seriola_lalandi_dorsalis
ENSORLG00020004891	-	60	90.751	ENSSARG00000012988	-	66	90.751	Sorex_araneus
ENSORLG00020004891	-	92	76.089	ENSSPUG00000015131	-	96	74.352	Sphenodon_punctatus
ENSORLG00020004891	-	92	67.485	ENSSPAG00000018749	-	94	67.845	Stegastes_partitus
ENSORLG00020004891	-	91	89.815	ENSSPAG00000013983	chd4a	99	77.678	Stegastes_partitus
ENSORLG00020004891	-	92	75.935	ENSSSCG00000000697	-	96	75.519	Sus_scrofa
ENSORLG00020004891	-	92	76.410	ENSTGUG00000013329	-	96	74.729	Taeniopygia_guttata
ENSORLG00020004891	-	96	84.489	ENSTRUG00000007202	-	100	83.581	Takifugu_rubripes
ENSORLG00020004891	-	85	80.184	ENSTRUG00000007623	-	87	80.184	Takifugu_rubripes
ENSORLG00020004891	-	97	64.081	ENSTNIG00000004095	-	88	80.125	Tetraodon_nigroviridis
ENSORLG00020004891	-	97	87.584	ENSTNIG00000008031	-	99	86.945	Tetraodon_nigroviridis
ENSORLG00020004891	-	83	76.918	ENSTBEG00000011379	-	90	77.181	Tupaia_belangeri
ENSORLG00020004891	-	94	94.872	ENSTTRG00000016102	-	97	71.274	Tursiops_truncatus
ENSORLG00020004891	-	85	88.333	ENSUAMG00000016452	-	96	87.097	Ursus_americanus
ENSORLG00020004891	-	85	88.333	ENSUMAG00000005336	-	94	88.333	Ursus_maritimus
ENSORLG00020004891	-	51	71.568	ENSXETG00000018961	-	99	68.545	Xenopus_tropicalis
ENSORLG00020004891	-	64	79.272	ENSXETG00000026410	chd4	99	85.844	Xenopus_tropicalis
ENSORLG00020004891	-	96	83.956	ENSXCOG00000019269	-	97	88.815	Xiphophorus_couchianus
ENSORLG00020004891	-	96	83.666	ENSXMAG00000011263	-	97	88.475	Xiphophorus_maculatus
ENSORLG00020004891	-	76	83.166	ENSXMAG00000001037	chd4a	94	81.705	Xiphophorus_maculatus
ENSORLG00020004891	-	84	80.556	ENSXMAG00000014686	-	93	79.545	Xiphophorus_maculatus