EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020005123 (Gene tree)
Gene ID: -
Gene Symbol: chd1l
Alias: -
Full Name: chromodomain helicase DNA binding protein 1-like
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 23728 bases
Position: chr4:6497610-6521337
Accession: ZDB-GENE-040426-892
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020004282	ResIII	PF04851.15	1.3e-10	1	1
ENSORLP00020004334	ResIII	PF04851.15	5.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020008241	-	1035	-	ENSORLP00020004282	344 (aa)	-	-
ENSORLT00020008145	-	6798	-	ENSORLP00020004334	957 (aa)	-	-

Gene Model

Click here to download ENSORLG00020005123's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020005123's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020005123	chd1l	90	38.484	ENSORLG00020021891	chd6	71	40.369
ENSORLG00020005123	chd1l	88	33.506	ENSORLG00020003952	hells	69	38.364
ENSORLG00020005123	chd1l	53	30.245	ENSORLG00020012171	rad54b	85	30.245
ENSORLG00020005123	chd1l	89	42.236	ENSORLG00020017679	smarca5	57	40.167

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020005123	chd1l	95	64.012	ENSG00000131778	CHD1L	98	63.339	Homo_sapiens
ENSORLG00020005123	chd1l	99	80.286	ENSAPOG00000001539	chd1l	99	82.609	Acanthochromis_polyacanthus
ENSORLG00020005123	chd1l	98	62.286	ENSAMEG00000017063	CHD1L	98	62.316	Ailuropoda_melanoleuca
ENSORLG00020005123	chd1l	93	80.734	ENSACIG00000001164	chd1l	99	79.587	Amphilophus_citrinellus
ENSORLG00020005123	chd1l	99	80.359	ENSAOCG00000014510	chd1l	93	80.676	Amphiprion_ocellaris
ENSORLG00020005123	chd1l	98	71.920	ENSAPEG00000017573	chd1l	95	80.092	Amphiprion_percula
ENSORLG00020005123	chd1l	99	72.000	ENSAPEG00000017450	chd1l	95	80.649	Amphiprion_percula
ENSORLG00020005123	chd1l	99	79.429	ENSATEG00000013058	chd1l	93	80.507	Anabas_testudineus
ENSORLG00020005123	chd1l	91	61.728	ENSAPLG00000009976	CHD1L	94	62.338	Anas_platyrhynchos
ENSORLG00020005123	chd1l	94	63.174	ENSACAG00000017686	CHD1L	96	60.820	Anolis_carolinensis
ENSORLG00020005123	chd1l	92	65.257	ENSANAG00000024347	CHD1L	97	62.089	Aotus_nancymaae
ENSORLG00020005123	chd1l	99	80.290	ENSACLG00000019304	chd1l	98	78.661	Astatotilapia_calliptera
ENSORLG00020005123	chd1l	99	61.143	ENSAMXG00000012367	chd1l	95	59.502	Astyanax_mexicanus
ENSORLG00020005123	chd1l	98	63.143	ENSBTAG00000020831	CHD1L	96	63.103	Bos_taurus
ENSORLG00020005123	chd1l	93	65.269	ENSCJAG00000002406	CHD1L	96	62.745	Callithrix_jacchus
ENSORLG00020005123	chd1l	92	59.707	ENSCAFG00000010944	CHD1L	98	59.456	Canis_familiaris
ENSORLG00020005123	chd1l	98	62.000	ENSCAFG00020020121	CHD1L	98	61.921	Canis_lupus_dingo
ENSORLG00020005123	chd1l	98	62.571	ENSCHIG00000013871	CHD1L	97	62.989	Capra_hircus
ENSORLG00020005123	chd1l	88	65.823	ENSTSYG00000003005	CHD1L	99	62.972	Carlito_syrichta
ENSORLG00020005123	chd1l	93	61.976	ENSCPOG00000009000	CHD1L	95	61.118	Cavia_porcellus
ENSORLG00020005123	chd1l	93	59.581	ENSCCAG00000036079	CHD1L	96	60.323	Cebus_capucinus
ENSORLG00020005123	chd1l	94	64.478	ENSCATG00000031044	CHD1L	96	62.356	Cercocebus_atys
ENSORLG00020005123	chd1l	97	62.536	ENSCLAG00000000880	CHD1L	97	63.303	Chinchilla_lanigera
ENSORLG00020005123	chd1l	94	64.478	ENSCSAG00000018386	CHD1L	96	62.240	Chlorocebus_sabaeus
ENSORLG00020005123	chd1l	99	62.040	ENSCPBG00000002600	CHD1L	98	63.086	Chrysemys_picta_bellii
ENSORLG00020005123	chd1l	94	62.798	ENSCANG00000020239	CHD1L	96	61.592	Colobus_angolensis_palliatus
ENSORLG00020005123	chd1l	94	64.881	ENSCGRG00001021624	Chd1l	96	63.594	Cricetulus_griseus_chok1gshd
ENSORLG00020005123	chd1l	88	65.714	ENSCGRG00000007554	Chd1l	98	63.876	Cricetulus_griseus_crigri
ENSORLG00020005123	chd1l	90	65.325	ENSCSEG00000007030	-	92	67.372	Cynoglossus_semilaevis
ENSORLG00020005123	chd1l	99	76.286	ENSCVAG00000002595	chd1l	97	76.250	Cyprinodon_variegatus
ENSORLG00020005123	chd1l	99	67.983	ENSDARG00000015471	chd1l	94	67.702	Danio_rerio
ENSORLG00020005123	chd1l	93	64.565	ENSDNOG00000019504	CHD1L	95	62.617	Dasypus_novemcinctus
ENSORLG00020005123	chd1l	93	61.377	ENSDORG00000013555	Chd1l	95	62.065	Dipodomys_ordii
ENSORLG00020005123	chd1l	72	76.667	ENSETEG00000008445	CHD1L	87	61.121	Echinops_telfairi
ENSORLG00020005123	chd1l	89	50.160	ENSEBUG00000005791	chd1l	88	51.184	Eptatretus_burgeri
ENSORLG00020005123	chd1l	93	64.264	ENSEASG00005007364	CHD1L	98	63.625	Equus_asinus_asinus
ENSORLG00020005123	chd1l	93	63.964	ENSECAG00000008915	CHD1L	98	63.379	Equus_caballus
ENSORLG00020005123	chd1l	98	65.616	ENSELUG00000016844	chd1l	93	59.129	Esox_lucius
ENSORLG00020005123	chd1l	92	63.939	ENSFCAG00000007777	CHD1L	95	63.477	Felis_catus
ENSORLG00020005123	chd1l	99	58.924	ENSFALG00000006087	CHD1L	97	60.407	Ficedula_albicollis
ENSORLG00020005123	chd1l	89	65.094	ENSFDAG00000012431	CHD1L	98	64.014	Fukomys_damarensis
ENSORLG00020005123	chd1l	99	76.600	ENSFHEG00000012420	chd1l	94	76.705	Fundulus_heteroclitus
ENSORLG00020005123	chd1l	90	72.100	ENSGMOG00000005076	CHD1L	99	76.453	Gadus_morhua
ENSORLG00020005123	chd1l	93	61.446	ENSGALG00000015038	CHD1L	97	62.486	Gallus_gallus
ENSORLG00020005123	chd1l	99	79.083	ENSGAFG00000018198	chd1l	99	75.346	Gambusia_affinis
ENSORLG00020005123	chd1l	90	77.743	ENSGACG00000014042	chd1l	98	81.907	Gasterosteus_aculeatus
ENSORLG00020005123	chd1l	99	61.364	ENSGAGG00000014432	CHD1L	99	62.658	Gopherus_agassizii
ENSORLG00020005123	chd1l	97	62.319	ENSGGOG00000001067	CHD1L	97	61.301	Gorilla_gorilla
ENSORLG00020005123	chd1l	99	80.870	ENSHBUG00000007464	chd1l	98	79.449	Haplochromis_burtoni
ENSORLG00020005123	chd1l	93	63.772	ENSHGLG00000008933	CHD1L	95	62.471	Heterocephalus_glaber_female
ENSORLG00020005123	chd1l	86	63.312	ENSHGLG00100007155	CHD1L	98	61.447	Heterocephalus_glaber_male
ENSORLG00020005123	chd1l	93	71.988	ENSHCOG00000012787	chd1l	93	72.685	Hippocampus_comes
ENSORLG00020005123	chd1l	99	63.240	ENSIPUG00000022617	chd1l	94	63.261	Ictalurus_punctatus
ENSORLG00020005123	chd1l	93	56.656	ENSSTOG00000007032	CHD1L	96	58.046	Ictidomys_tridecemlineatus
ENSORLG00020005123	chd1l	99	77.859	ENSKMAG00000014358	chd1l	93	78.069	Kryptolebias_marmoratus
ENSORLG00020005123	chd1l	99	75.884	ENSLBEG00000023845	chd1l	96	78.155	Labrus_bergylta
ENSORLG00020005123	chd1l	99	55.247	ENSLACG00000006262	CHD1L	93	56.360	Latimeria_chalumnae
ENSORLG00020005123	chd1l	98	69.714	ENSLOCG00000010574	chd1l	93	68.737	Lepisosteus_oculatus
ENSORLG00020005123	chd1l	89	65.094	ENSLAFG00000018136	CHD1L	98	62.692	Loxodonta_africana
ENSORLG00020005123	chd1l	90	63.665	ENSMFAG00000043562	CHD1L	99	62.485	Macaca_fascicularis
ENSORLG00020005123	chd1l	94	64.776	ENSMMUG00000009024	CHD1L	96	62.356	Macaca_mulatta
ENSORLG00020005123	chd1l	94	64.776	ENSMNEG00000039905	CHD1L	96	62.356	Macaca_nemestrina
ENSORLG00020005123	chd1l	94	64.478	ENSMLEG00000030900	CHD1L	96	62.240	Mandrillus_leucophaeus
ENSORLG00020005123	chd1l	99	77.714	ENSMAMG00000012822	chd1l	99	77.497	Mastacembelus_armatus
ENSORLG00020005123	chd1l	99	79.143	ENSMZEG00005020830	chd1l	96	77.963	Maylandia_zebra
ENSORLG00020005123	chd1l	90	62.813	ENSMGAG00000014304	CHD1L	98	63.183	Meleagris_gallopavo
ENSORLG00020005123	chd1l	94	64.776	ENSMAUG00000004712	-	92	67.500	Mesocricetus_auratus
ENSORLG00020005123	chd1l	93	64.671	ENSMICG00000002497	CHD1L	96	62.514	Microcebus_murinus
ENSORLG00020005123	chd1l	94	65.476	ENSMOCG00000006305	Chd1l	95	63.615	Microtus_ochrogaster
ENSORLG00020005123	chd1l	99	70.115	ENSMMOG00000005964	chd1l	91	72.905	Mola_mola
ENSORLG00020005123	chd1l	98	62.640	ENSMODG00000018717	CHD1L	97	62.230	Monodelphis_domestica
ENSORLG00020005123	chd1l	99	78.286	ENSMALG00000014675	chd1l	93	77.906	Monopterus_albus
ENSORLG00020005123	chd1l	94	64.478	MGP_CAROLIEiJ_G0025401	Chd1l	97	63.006	Mus_caroli
ENSORLG00020005123	chd1l	94	64.478	ENSMUSG00000028089	Chd1l	97	62.916	Mus_musculus
ENSORLG00020005123	chd1l	94	64.583	MGP_PahariEiJ_G0026845	Chd1l	95	64.136	Mus_pahari
ENSORLG00020005123	chd1l	94	64.776	MGP_SPRETEiJ_G0026347	Chd1l	97	63.237	Mus_spretus
ENSORLG00020005123	chd1l	98	62.286	ENSMPUG00000000615	CHD1L	98	62.061	Mustela_putorius_furo
ENSORLG00020005123	chd1l	92	64.371	ENSMLUG00000007573	CHD1L	96	60.579	Myotis_lucifugus
ENSORLG00020005123	chd1l	92	63.253	ENSNGAG00000000908	Chd1l	97	59.049	Nannospalax_galili
ENSORLG00020005123	chd1l	99	73.623	ENSNBRG00000006021	chd1l	95	76.923	Neolamprologus_brichardi
ENSORLG00020005123	chd1l	94	63.690	ENSNLEG00000000179	CHD1L	94	62.412	Nomascus_leucogenys
ENSORLG00020005123	chd1l	89	61.006	ENSOPRG00000006973	CHD1L	91	64.579	Ochotona_princeps
ENSORLG00020005123	chd1l	89	58.161	ENSODEG00000002494	CHD1L	97	58.190	Octodon_degus
ENSORLG00020005123	chd1l	99	80.000	ENSONIG00000003183	chd1l	97	78.586	Oreochromis_niloticus
ENSORLG00020005123	chd1l	81	61.724	ENSOANG00000003068	CHD1L	93	60.847	Ornithorhynchus_anatinus
ENSORLG00020005123	chd1l	93	63.473	ENSOCUG00000009336	CHD1L	95	59.749	Oryctolagus_cuniculus
ENSORLG00020005123	chd1l	99	94.286	ENSORLG00000003673	chd1l	95	96.391	Oryzias_latipes
ENSORLG00020005123	chd1l	100	98.121	ENSORLG00015001680	chd1l	99	98.121	Oryzias_latipes_hsok
ENSORLG00020005123	chd1l	78	91.376	ENSOMEG00000006109	chd1l	88	91.211	Oryzias_melastigma
ENSORLG00020005123	chd1l	94	64.478	ENSOGAG00000008775	CHD1L	95	62.427	Otolemur_garnettii
ENSORLG00020005123	chd1l	98	62.286	ENSOARG00000020547	CHD1L	97	64.200	Ovis_aries
ENSORLG00020005123	chd1l	95	62.537	ENSPPAG00000039193	CHD1L	99	62.439	Pan_paniscus
ENSORLG00020005123	chd1l	92	64.242	ENSPPRG00000010258	CHD1L	96	63.091	Panthera_pardus
ENSORLG00020005123	chd1l	95	64.012	ENSPTRG00000001220	CHD1L	96	62.255	Pan_troglodytes
ENSORLG00020005123	chd1l	93	64.458	ENSPANG00000009170	CHD1L	96	62.240	Papio_anubis
ENSORLG00020005123	chd1l	99	67.263	ENSPKIG00000022166	chd1l	97	68.357	Paramormyrops_kingsleyae
ENSORLG00020005123	chd1l	99	62.606	ENSPSIG00000012595	CHD1L	96	62.600	Pelodiscus_sinensis
ENSORLG00020005123	chd1l	99	72.034	ENSPMGG00000015884	-	99	73.538	Periophthalmus_magnuspinnatus
ENSORLG00020005123	chd1l	98	61.538	ENSPEMG00000013528	Chd1l	97	61.433	Peromyscus_maniculatus_bairdii
ENSORLG00020005123	chd1l	86	62.110	ENSPCIG00000030409	CHD1L	98	63.300	Phascolarctos_cinereus
ENSORLG00020005123	chd1l	99	78.286	ENSPFOG00000015948	chd1l	94	76.403	Poecilia_formosa
ENSORLG00020005123	chd1l	99	78.857	ENSPLAG00000015145	chd1l	97	79.334	Poecilia_latipinna
ENSORLG00020005123	chd1l	99	78.286	ENSPMEG00000008720	chd1l	99	76.931	Poecilia_mexicana
ENSORLG00020005123	chd1l	99	77.681	ENSPREG00000017885	chd1l	98	78.060	Poecilia_reticulata
ENSORLG00020005123	chd1l	94	64.478	ENSPPYG00000000946	CHD1L	96	62.009	Pongo_abelii
ENSORLG00020005123	chd1l	93	63.063	ENSPCAG00000005959	CHD1L	90	57.494	Procavia_capensis
ENSORLG00020005123	chd1l	88	58.608	ENSPVAG00000006084	CHD1L	99	58.580	Pteropus_vampyrus
ENSORLG00020005123	chd1l	99	80.580	ENSPNYG00000013001	chd1l	97	79.564	Pundamilia_nyererei
ENSORLG00020005123	chd1l	98	70.690	ENSPNAG00000011881	chd1l	94	66.873	Pygocentrus_nattereri
ENSORLG00020005123	chd1l	98	62.857	ENSRNOG00000017669	Chd1l	97	62.799	Rattus_norvegicus
ENSORLG00020005123	chd1l	94	61.791	ENSRBIG00000041272	CHD1L	96	61.201	Rhinopithecus_bieti
ENSORLG00020005123	chd1l	94	61.791	ENSRROG00000041354	CHD1L	95	61.710	Rhinopithecus_roxellana
ENSORLG00020005123	chd1l	94	63.314	ENSSHAG00000017395	CHD1L	97	61.530	Sarcophilus_harrisii
ENSORLG00020005123	chd1l	99	68.661	ENSSFOG00015003649	chd1l	98	70.161	Scleropages_formosus
ENSORLG00020005123	chd1l	99	77.841	ENSSMAG00000019377	chd1l	96	76.376	Scophthalmus_maximus
ENSORLG00020005123	chd1l	92	77.676	ENSSDUG00000019831	chd1l	95	79.765	Seriola_dumerili
ENSORLG00020005123	chd1l	92	77.370	ENSSLDG00000012714	chd1l	95	80.164	Seriola_lalandi_dorsalis
ENSORLG00020005123	chd1l	99	60.795	ENSSPUG00000016865	CHD1L	98	61.213	Sphenodon_punctatus
ENSORLG00020005123	chd1l	99	80.286	ENSSPAG00000017653	chd1l	100	79.600	Stegastes_partitus
ENSORLG00020005123	chd1l	98	62.857	ENSSSCG00000006701	CHD1L	98	60.596	Sus_scrofa
ENSORLG00020005123	chd1l	93	62.462	ENSTGUG00000013392	-	99	61.806	Taeniopygia_guttata
ENSORLG00020005123	chd1l	55	65.957	ENSTRUG00000020456	-	82	64.563	Takifugu_rubripes
ENSORLG00020005123	chd1l	91	73.968	ENSTRUG00000011753	-	92	72.500	Takifugu_rubripes
ENSORLG00020005123	chd1l	89	68.868	ENSTNIG00000004902	chd1l	99	68.235	Tetraodon_nigroviridis
ENSORLG00020005123	chd1l	88	60.234	ENSTTRG00000011711	CHD1L	99	60.517	Tursiops_truncatus
ENSORLG00020005123	chd1l	94	62.130	ENSUAMG00000021991	CHD1L	98	62.245	Ursus_americanus
ENSORLG00020005123	chd1l	98	61.823	ENSUMAG00000009733	CHD1L	98	62.018	Ursus_maritimus
ENSORLG00020005123	chd1l	98	62.286	ENSVVUG00000007316	CHD1L	93	61.608	Vulpes_vulpes
ENSORLG00020005123	chd1l	98	73.166	ENSXCOG00000008336	chd1l	93	73.061	Xiphophorus_couchianus
ENSORLG00020005123	chd1l	99	78.286	ENSXMAG00000015898	chd1l	96	76.442	Xiphophorus_maculatus