EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020005363 (Gene tree)
Gene ID: -
Gene Symbol: hnrnpub
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein U
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 9881 bases
Position: chr24:11989118-11998998
Accession: 101165119
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020004565	SAP	PF02037.27	3.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020007744	-	4508	XM_011491757	ENSORLP00020004565	801 (aa)	XP_011490059	-

Gene Model

Click here to download ENSORLG00020005363's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020005363's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020005363	hnrnpub	86	83.333	ENSG00000153187	HNRNPU	99	65.333	Homo_sapiens
ENSORLG00020005363	hnrnpub	100	83.891	ENSAPOG00000017400	hnrnpub	100	82.280	Acanthochromis_polyacanthus
ENSORLG00020005363	hnrnpub	86	83.333	ENSAMEG00000009145	HNRNPU	77	78.261	Ailuropoda_melanoleuca
ENSORLG00020005363	hnrnpub	100	77.178	ENSACIG00000012138	hnrnpub	100	79.972	Amphilophus_citrinellus
ENSORLG00020005363	hnrnpub	100	85.360	ENSAOCG00000015843	hnrnpub	100	83.024	Amphiprion_ocellaris
ENSORLG00020005363	hnrnpub	100	85.360	ENSAPEG00000014679	hnrnpub	100	83.024	Amphiprion_percula
ENSORLG00020005363	hnrnpub	98	85.786	ENSATEG00000016178	hnrnpub	97	85.660	Anabas_testudineus
ENSORLG00020005363	hnrnpub	88	68.750	ENSACAG00000004511	HNRNPU	78	68.750	Anolis_carolinensis
ENSORLG00020005363	hnrnpub	99	49.710	ENSANAG00000033895	-	79	60.517	Aotus_nancymaae
ENSORLG00020005363	hnrnpub	100	82.818	ENSACLG00000008165	hnrnpub	100	81.165	Astatotilapia_calliptera
ENSORLG00020005363	hnrnpub	86	83.333	ENSBTAG00000007606	HNRNPU	79	78.261	Bos_taurus
ENSORLG00020005363	hnrnpub	86	83.333	ENSCJAG00000016914	HNRNPU	79	78.261	Callithrix_jacchus
ENSORLG00020005363	hnrnpub	80	55.105	ENSCAFG00020000918	HNRNPU	75	57.761	Canis_lupus_dingo
ENSORLG00020005363	hnrnpub	80	56.966	ENSCHIG00000004900	HNRNPU	75	56.930	Capra_hircus
ENSORLG00020005363	hnrnpub	86	85.714	ENSCPOG00000011887	HNRNPU	79	80.435	Cavia_porcellus
ENSORLG00020005363	hnrnpub	86	83.333	ENSCCAG00000037859	-	79	78.261	Cebus_capucinus
ENSORLG00020005363	hnrnpub	86	83.333	ENSCATG00000035273	HNRNPU	79	78.261	Cercocebus_atys
ENSORLG00020005363	hnrnpub	86	85.714	ENSCLAG00000007100	HNRNPU	79	80.435	Chinchilla_lanigera
ENSORLG00020005363	hnrnpub	80	54.737	ENSCSAG00000009219	HNRNPU	75	56.951	Chlorocebus_sabaeus
ENSORLG00020005363	hnrnpub	86	83.333	ENSCHOG00000001387	HNRNPU	76	78.261	Choloepus_hoffmanni
ENSORLG00020005363	hnrnpub	94	56.334	ENSCPBG00000009415	HNRNPU	79	68.966	Chrysemys_picta_bellii
ENSORLG00020005363	hnrnpub	86	83.333	ENSCANG00000022780	HNRNPU	77	78.261	Colobus_angolensis_palliatus
ENSORLG00020005363	hnrnpub	88	83.721	ENSCGRG00001020525	Hnrnpu	81	83.721	Cricetulus_griseus_chok1gshd
ENSORLG00020005363	hnrnpub	100	75.957	ENSCSEG00000010804	hnrnpub	100	75.862	Cynoglossus_semilaevis
ENSORLG00020005363	hnrnpub	88	76.786	ENSCVAG00000004280	hnrnpub	100	73.605	Cyprinodon_variegatus
ENSORLG00020005363	hnrnpub	100	62.094	ENSDARG00000004735	hnrnpub	100	60.048	Danio_rerio
ENSORLG00020005363	hnrnpub	100	59.683	ENSDARG00000015206	hnrnpua	84	62.150	Danio_rerio
ENSORLG00020005363	hnrnpub	99	52.040	ENSDNOG00000000215	HNRNPU	86	83.333	Dasypus_novemcinctus
ENSORLG00020005363	hnrnpub	80	54.805	ENSDORG00000015491	Hnrnpu	74	57.669	Dipodomys_ordii
ENSORLG00020005363	hnrnpub	80	56.656	ENSETEG00000014565	HNRNPU	78	78.261	Echinops_telfairi
ENSORLG00020005363	hnrnpub	81	56.621	ENSEASG00005003017	HNRNPU	75	57.567	Equus_asinus_asinus
ENSORLG00020005363	hnrnpub	81	56.469	ENSECAG00000007955	HNRNPU	75	57.418	Equus_caballus
ENSORLG00020005363	hnrnpub	100	70.000	ENSELUG00000010733	hnrnpub	100	71.631	Esox_lucius
ENSORLG00020005363	hnrnpub	100	57.178	ENSELUG00000011966	hnrnpua	100	56.359	Esox_lucius
ENSORLG00020005363	hnrnpub	80	54.655	ENSFCAG00000002156	HNRNPU	74	57.463	Felis_catus
ENSORLG00020005363	hnrnpub	90	85.714	ENSFDAG00000006026	HNRNPU	99	80.435	Fukomys_damarensis
ENSORLG00020005363	hnrnpub	100	81.995	ENSFHEG00000022639	hnrnpub	100	83.212	Fundulus_heteroclitus
ENSORLG00020005363	hnrnpub	100	69.868	ENSGMOG00000001755	hnrnpub	99	69.712	Gadus_morhua
ENSORLG00020005363	hnrnpub	87	71.930	ENSGALG00000010671	HNRNPU	78	71.930	Gallus_gallus
ENSORLG00020005363	hnrnpub	100	80.312	ENSGAFG00000009369	hnrnpub	100	80.312	Gambusia_affinis
ENSORLG00020005363	hnrnpub	100	72.486	ENSGACG00000004679	hnrnpub	99	72.254	Gasterosteus_aculeatus
ENSORLG00020005363	hnrnpub	86	83.333	ENSGGOG00000004061	HNRNPU	79	78.261	Gorilla_gorilla
ENSORLG00020005363	hnrnpub	100	82.942	ENSHBUG00000012290	hnrnpub	100	81.413	Haplochromis_burtoni
ENSORLG00020005363	hnrnpub	86	85.714	ENSHGLG00000010594	-	76	80.435	Heterocephalus_glaber_female
ENSORLG00020005363	hnrnpub	91	85.714	ENSHGLG00100015093	HNRNPU	99	80.435	Heterocephalus_glaber_male
ENSORLG00020005363	hnrnpub	85	79.039	ENSHCOG00000020091	hnrnpub	100	71.480	Hippocampus_comes
ENSORLG00020005363	hnrnpub	78	89.362	ENSIPUG00000007749	hnrnpu	91	81.481	Ictalurus_punctatus
ENSORLG00020005363	hnrnpub	86	83.721	ENSJJAG00000011371	Hnrnpu	79	83.721	Jaculus_jaculus
ENSORLG00020005363	hnrnpub	100	80.464	ENSKMAG00000004532	hnrnpub	100	81.197	Kryptolebias_marmoratus
ENSORLG00020005363	hnrnpub	85	86.938	ENSLBEG00000022520	hnrnpub	100	81.663	Labrus_bergylta
ENSORLG00020005363	hnrnpub	89	91.489	ENSLOCG00000016652	hnrnpua	78	91.489	Lepisosteus_oculatus
ENSORLG00020005363	hnrnpub	87	83.333	ENSLAFG00000021377	HNRNPU	79	78.261	Loxodonta_africana
ENSORLG00020005363	hnrnpub	86	83.333	ENSMFAG00000037308	HNRNPU	79	78.261	Macaca_fascicularis
ENSORLG00020005363	hnrnpub	80	55.199	ENSMMUG00000021098	HNRNPU	75	56.951	Macaca_mulatta
ENSORLG00020005363	hnrnpub	86	83.333	ENSMNEG00000043645	HNRNPU	79	78.261	Macaca_nemestrina
ENSORLG00020005363	hnrnpub	100	87.221	ENSMAMG00000007196	hnrnpub	100	86.725	Mastacembelus_armatus
ENSORLG00020005363	hnrnpub	100	82.818	ENSMZEG00005003185	hnrnpub	100	81.289	Maylandia_zebra
ENSORLG00020005363	hnrnpub	88	83.721	ENSMAUG00000008842	Hnrnpu	79	83.721	Mesocricetus_auratus
ENSORLG00020005363	hnrnpub	86	83.333	ENSMICG00000004616	HNRNPU	79	78.261	Microcebus_murinus
ENSORLG00020005363	hnrnpub	88	83.721	ENSMOCG00000015623	Hnrnpu	81	83.721	Microtus_ochrogaster
ENSORLG00020005363	hnrnpub	87	67.273	ENSMODG00000006515	HNRNPU	78	78.261	Monodelphis_domestica
ENSORLG00020005363	hnrnpub	96	84.923	ENSMALG00000018243	hnrnpub	99	84.536	Monopterus_albus
ENSORLG00020005363	hnrnpub	80	55.860	MGP_CAROLIEiJ_G0014962	Hnrnpu	75	56.567	Mus_caroli
ENSORLG00020005363	hnrnpub	86	83.721	MGP_PahariEiJ_G0028193	Hnrnpu	80	83.721	Mus_pahari
ENSORLG00020005363	hnrnpub	87	80.952	ENSMLUG00000000475	HNRNPU	80	76.087	Myotis_lucifugus
ENSORLG00020005363	hnrnpub	99	49.318	ENSNGAG00000019075	Hnrnpu	81	83.721	Nannospalax_galili
ENSORLG00020005363	hnrnpub	100	82.818	ENSNBRG00000017855	hnrnpub	100	81.289	Neolamprologus_brichardi
ENSORLG00020005363	hnrnpub	80	67.273	ENSMEUG00000000541	HNRNPU	77	78.261	Notamacropus_eugenii
ENSORLG00020005363	hnrnpub	100	82.668	ENSONIG00000001260	hnrnpub	100	80.923	Oreochromis_niloticus
ENSORLG00020005363	hnrnpub	78	83.333	ENSOCUG00000014469	HNRNPU	71	78.261	Oryctolagus_cuniculus
ENSORLG00020005363	hnrnpub	100	99.501	ENSORLG00000016114	hnrnpub	100	99.501	Oryzias_latipes
ENSORLG00020005363	hnrnpub	100	99.751	ENSORLG00015001190	hnrnpub	100	99.751	Oryzias_latipes_hsok
ENSORLG00020005363	hnrnpub	100	93.267	ENSOMEG00000014951	hnrnpub	100	92.768	Oryzias_melastigma
ENSORLG00020005363	hnrnpub	80	56.966	ENSOGAG00000014024	HNRNPU	75	57.761	Otolemur_garnettii
ENSORLG00020005363	hnrnpub	86	83.333	ENSOARG00000004985	HNRNPU	85	78.261	Ovis_aries
ENSORLG00020005363	hnrnpub	86	83.333	ENSPPAG00000038652	HNRNPU	79	78.261	Pan_paniscus
ENSORLG00020005363	hnrnpub	88	83.333	ENSPPRG00000002662	HNRNPU	78	78.261	Panthera_pardus
ENSORLG00020005363	hnrnpub	86	83.333	ENSPTRG00000002182	HNRNPU	79	78.261	Pan_troglodytes
ENSORLG00020005363	hnrnpub	80	55.199	ENSPANG00000011643	HNRNPU	79	60.517	Papio_anubis
ENSORLG00020005363	hnrnpub	100	66.545	ENSPKIG00000022332	hnrnpub	100	63.735	Paramormyrops_kingsleyae
ENSORLG00020005363	hnrnpub	100	65.102	ENSPKIG00000006885	hnrnpua	81	69.764	Paramormyrops_kingsleyae
ENSORLG00020005363	hnrnpub	86	78.261	ENSPCIG00000008657	HNRNPU	77	78.261	Phascolarctos_cinereus
ENSORLG00020005363	hnrnpub	100	81.640	ENSPFOG00000002908	hnrnpub	100	81.518	Poecilia_formosa
ENSORLG00020005363	hnrnpub	100	82.108	ENSPLAG00000004160	hnrnpub	100	81.618	Poecilia_latipinna
ENSORLG00020005363	hnrnpub	86	83.333	ENSPCOG00000018655	-	79	78.261	Propithecus_coquereli
ENSORLG00020005363	hnrnpub	80	56.124	ENSPCOG00000003883	-	77	55.672	Propithecus_coquereli
ENSORLG00020005363	hnrnpub	86	83.333	ENSPVAG00000002581	HNRNPU	79	78.261	Pteropus_vampyrus
ENSORLG00020005363	hnrnpub	100	83.066	ENSPNYG00000021642	hnrnpub	100	81.413	Pundamilia_nyererei
ENSORLG00020005363	hnrnpub	100	66.546	ENSPNAG00000001055	hnrnpub	83	68.940	Pygocentrus_nattereri
ENSORLG00020005363	hnrnpub	86	83.721	ENSRNOG00000033790	Hnrnpu	81	83.721	Rattus_norvegicus
ENSORLG00020005363	hnrnpub	80	54.587	ENSRBIG00000031519	HNRNPU	78	59.828	Rhinopithecus_bieti
ENSORLG00020005363	hnrnpub	83	53.857	ENSRROG00000041642	HNRNPU	76	61.376	Rhinopithecus_roxellana
ENSORLG00020005363	hnrnpub	100	65.150	ENSSFOG00015019004	hnrnpu	97	65.287	Scleropages_formosus
ENSORLG00020005363	hnrnpub	100	66.104	ENSSFOG00015001124	hnrnpub	81	72.182	Scleropages_formosus
ENSORLG00020005363	hnrnpub	85	87.083	ENSSMAG00000003607	hnrnpub	100	79.310	Scophthalmus_maximus
ENSORLG00020005363	hnrnpub	100	85.662	ENSSDUG00000005912	hnrnpub	100	85.172	Seriola_dumerili
ENSORLG00020005363	hnrnpub	100	85.348	ENSSLDG00000004899	hnrnpub	100	86.081	Seriola_lalandi_dorsalis
ENSORLG00020005363	hnrnpub	88	82.927	ENSSPUG00000011393	HNRNPU	80	74.000	Sphenodon_punctatus
ENSORLG00020005363	hnrnpub	100	84.367	ENSSPAG00000011853	hnrnpub	100	83.395	Stegastes_partitus
ENSORLG00020005363	hnrnpub	86	83.333	ENSSSCG00000010877	HNRNPU	79	78.261	Sus_scrofa
ENSORLG00020005363	hnrnpub	100	77.859	ENSTRUG00000007759	hnrnpub	83	83.895	Takifugu_rubripes
ENSORLG00020005363	hnrnpub	100	73.447	ENSTNIG00000009725	hnrnpub	100	73.886	Tetraodon_nigroviridis
ENSORLG00020005363	hnrnpub	86	83.333	ENSUAMG00000021120	HNRNPU	79	78.261	Ursus_americanus
ENSORLG00020005363	hnrnpub	86	74.419	ENSUMAG00000012322	HNRNPU	81	74.419	Ursus_maritimus
ENSORLG00020005363	hnrnpub	79	83.333	ENSVPAG00000010520	HNRNPU	82	78.261	Vicugna_pacos
ENSORLG00020005363	hnrnpub	80	55.105	ENSVVUG00000026524	HNRNPU	75	57.761	Vulpes_vulpes
ENSORLG00020005363	hnrnpub	99	49.304	ENSXETG00000011386	hnrnpu	77	52.838	Xenopus_tropicalis
ENSORLG00020005363	hnrnpub	100	81.319	ENSXMAG00000010356	hnrnpub	100	80.464	Xiphophorus_maculatus