EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020005555 (Gene tree)
Gene ID: -
Gene Symbol: polr1c
Alias: -
Full Name: RNA polymerase I and III subunit C
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 1455 bases
Position: chr23:21384252-21385706
Accession: ZDB-GENE-040426-1495
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020024254	RNA_pol_A_bac	PF01000.26	1.6e-14	1	1
ENSORLP00020024254	RNA_pol_L	PF01193.24	4.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020007427	-	948	-	ENSORLP00020024254	315 (aa)	-	-

Gene Model

Click here to download ENSORLG00020005555's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020005555's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020005555	polr1c	81	76.449	ENSORLG00020006489	POLR1C	79	74.638

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020005555	polr1c	68	58.952	ENSG00000171453	POLR1C	77	58.952	Homo_sapiens
ENSORLG00020005555	polr1c	81	64.855	ENSAPOG00000024356	polr1c	76	65.328	Acanthochromis_polyacanthus
ENSORLG00020005555	polr1c	68	59.389	ENSAMEG00000012205	POLR1C	65	59.389	Ailuropoda_melanoleuca
ENSORLG00020005555	polr1c	81	67.616	ENSACIG00000016268	polr1c	86	67.616	Amphilophus_citrinellus
ENSORLG00020005555	polr1c	81	65.217	ENSAOCG00000011687	polr1c	74	65.693	Amphiprion_ocellaris
ENSORLG00020005555	polr1c	81	65.580	ENSAPEG00000002433	polr1c	76	66.058	Amphiprion_percula
ENSORLG00020005555	polr1c	81	67.754	ENSATEG00000005985	polr1c	76	68.248	Anabas_testudineus
ENSORLG00020005555	polr1c	81	54.182	ENSAPLG00000002908	POLR1C	88	54.182	Anas_platyrhynchos
ENSORLG00020005555	polr1c	75	55.118	ENSACAG00000009764	POLR1C	70	55.118	Anolis_carolinensis
ENSORLG00020005555	polr1c	68	59.389	ENSANAG00000025805	POLR1C	64	59.389	Aotus_nancymaae
ENSORLG00020005555	polr1c	81	68.889	ENSACLG00000006573	polr1c	76	68.889	Astatotilapia_calliptera
ENSORLG00020005555	polr1c	81	62.774	ENSAMXG00000012062	polr1c	76	62.774	Astyanax_mexicanus
ENSORLG00020005555	polr1c	68	59.825	ENSBTAG00000018969	POLR1C	65	59.825	Bos_taurus
ENSORLG00020005555	polr1c	68	41.423	WBGene00019275	rpac-40	65	41.423	Caenorhabditis_elegans
ENSORLG00020005555	polr1c	68	58.079	ENSCJAG00000005594	POLR1C	65	58.079	Callithrix_jacchus
ENSORLG00020005555	polr1c	68	59.389	ENSCAFG00000001872	POLR1C	65	59.389	Canis_familiaris
ENSORLG00020005555	polr1c	68	59.389	ENSCAFG00020012018	POLR1C	65	59.389	Canis_lupus_dingo
ENSORLG00020005555	polr1c	68	59.389	ENSCHIG00000004352	POLR1C	65	59.389	Capra_hircus
ENSORLG00020005555	polr1c	68	59.389	ENSTSYG00000011921	POLR1C	65	59.389	Carlito_syrichta
ENSORLG00020005555	polr1c	68	59.389	ENSCAPG00000015364	POLR1C	66	59.389	Cavia_aperea
ENSORLG00020005555	polr1c	68	59.389	ENSCPOG00000038098	POLR1C	65	59.389	Cavia_porcellus
ENSORLG00020005555	polr1c	68	58.952	ENSCCAG00000020169	POLR1C	65	58.952	Cebus_capucinus
ENSORLG00020005555	polr1c	68	58.952	ENSCATG00000044045	POLR1C	65	58.515	Cercocebus_atys
ENSORLG00020005555	polr1c	68	59.825	ENSCLAG00000009266	POLR1C	65	59.825	Chinchilla_lanigera
ENSORLG00020005555	polr1c	68	58.515	ENSCSAG00000011913	POLR1C	65	58.515	Chlorocebus_sabaeus
ENSORLG00020005555	polr1c	57	57.436	ENSCHOG00000006601	POLR1C	92	57.436	Choloepus_hoffmanni
ENSORLG00020005555	polr1c	81	56.569	ENSCPBG00000025203	POLR1C	76	56.569	Chrysemys_picta_bellii
ENSORLG00020005555	polr1c	81	45.588	ENSCING00000003563	-	76	45.588	Ciona_intestinalis
ENSORLG00020005555	polr1c	68	58.515	ENSCANG00000043167	POLR1C	65	58.515	Colobus_angolensis_palliatus
ENSORLG00020005555	polr1c	68	58.952	ENSCGRG00001017533	Polr1c	65	58.952	Cricetulus_griseus_chok1gshd
ENSORLG00020005555	polr1c	68	58.952	ENSCGRG00000013225	Polr1c	75	58.952	Cricetulus_griseus_crigri
ENSORLG00020005555	polr1c	81	64.855	ENSCSEG00000018097	polr1c	77	64.855	Cynoglossus_semilaevis
ENSORLG00020005555	polr1c	57	79.487	ENSCVAG00000005684	polr1c	82	78.155	Cyprinodon_variegatus
ENSORLG00020005555	polr1c	81	61.232	ENSDARG00000039400	polr1c	73	61.232	Danio_rerio
ENSORLG00020005555	polr1c	68	58.952	ENSDNOG00000042693	POLR1C	65	58.952	Dasypus_novemcinctus
ENSORLG00020005555	polr1c	69	59.307	ENSDORG00000000429	Polr1c	66	59.307	Dipodomys_ordii
ENSORLG00020005555	polr1c	68	45.415	FBgn0031657	CG3756	67	45.415	Drosophila_melanogaster
ENSORLG00020005555	polr1c	68	55.022	ENSETEG00000010807	POLR1C	65	55.022	Echinops_telfairi
ENSORLG00020005555	polr1c	81	50.730	ENSEBUG00000013725	polr1c	82	50.545	Eptatretus_burgeri
ENSORLG00020005555	polr1c	68	59.825	ENSEASG00005003338	POLR1C	65	59.825	Equus_asinus_asinus
ENSORLG00020005555	polr1c	68	59.389	ENSECAG00000023516	POLR1C	64	59.389	Equus_caballus
ENSORLG00020005555	polr1c	68	60.262	ENSEEUG00000005471	POLR1C	65	60.262	Erinaceus_europaeus
ENSORLG00020005555	polr1c	83	60.993	ENSELUG00000013027	polr1c	78	60.993	Esox_lucius
ENSORLG00020005555	polr1c	68	59.389	ENSFCAG00000009735	POLR1C	65	59.389	Felis_catus
ENSORLG00020005555	polr1c	81	54.745	ENSFALG00000012111	POLR1C	82	54.745	Ficedula_albicollis
ENSORLG00020005555	polr1c	68	59.389	ENSFDAG00000008428	POLR1C	65	59.389	Fukomys_damarensis
ENSORLG00020005555	polr1c	81	52.692	ENSFHEG00000000262	polr1c	72	51.825	Fundulus_heteroclitus
ENSORLG00020005555	polr1c	81	60.650	ENSGMOG00000013878	polr1c	82	60.650	Gadus_morhua
ENSORLG00020005555	polr1c	81	55.109	ENSGALG00000010349	POLR1C	76	55.109	Gallus_gallus
ENSORLG00020005555	polr1c	81	66.304	ENSGAFG00000010153	polr1c	77	66.304	Gambusia_affinis
ENSORLG00020005555	polr1c	81	64.964	ENSGACG00000002453	polr1c	76	64.964	Gasterosteus_aculeatus
ENSORLG00020005555	polr1c	81	56.204	ENSGAGG00000010640	POLR1C	82	56.000	Gopherus_agassizii
ENSORLG00020005555	polr1c	68	58.952	ENSGGOG00000010903	POLR1C	65	58.515	Gorilla_gorilla
ENSORLG00020005555	polr1c	83	67.870	ENSHBUG00000017816	polr1c	80	67.870	Haplochromis_burtoni
ENSORLG00020005555	polr1c	68	59.389	ENSHGLG00000019441	POLR1C	87	59.389	Heterocephalus_glaber_female
ENSORLG00020005555	polr1c	68	59.389	ENSHGLG00100005970	POLR1C	87	59.389	Heterocephalus_glaber_male
ENSORLG00020005555	polr1c	80	63.736	ENSHCOG00000002179	polr1c	76	63.736	Hippocampus_comes
ENSORLG00020005555	polr1c	81	62.044	ENSIPUG00000024464	polr1c	76	62.044	Ictalurus_punctatus
ENSORLG00020005555	polr1c	68	59.389	ENSSTOG00000010631	POLR1C	65	59.389	Ictidomys_tridecemlineatus
ENSORLG00020005555	polr1c	68	59.825	ENSJJAG00000023110	Polr1c	65	59.825	Jaculus_jaculus
ENSORLG00020005555	polr1c	81	67.029	ENSKMAG00000014305	polr1c	74	67.518	Kryptolebias_marmoratus
ENSORLG00020005555	polr1c	81	68.116	ENSLBEG00000014925	polr1c	76	68.613	Labrus_bergylta
ENSORLG00020005555	polr1c	68	49.782	ENSLACG00000012567	POLR1C	66	49.782	Latimeria_chalumnae
ENSORLG00020005555	polr1c	81	59.854	ENSLOCG00000016710	polr1c	73	59.854	Lepisosteus_oculatus
ENSORLG00020005555	polr1c	81	52.768	ENSLAFG00000026248	POLR1C	88	52.768	Loxodonta_africana
ENSORLG00020005555	polr1c	68	58.515	ENSMFAG00000046295	POLR1C	65	58.079	Macaca_fascicularis
ENSORLG00020005555	polr1c	68	58.079	ENSMMUG00000015192	POLR1C	65	58.079	Macaca_mulatta
ENSORLG00020005555	polr1c	68	58.515	ENSMNEG00000028073	POLR1C	65	58.079	Macaca_nemestrina
ENSORLG00020005555	polr1c	68	58.952	ENSMLEG00000034818	POLR1C	65	58.515	Mandrillus_leucophaeus
ENSORLG00020005555	polr1c	81	66.788	ENSMAMG00000008700	polr1c	76	66.788	Mastacembelus_armatus
ENSORLG00020005555	polr1c	81	68.519	ENSMZEG00005018545	polr1c	76	68.519	Maylandia_zebra
ENSORLG00020005555	polr1c	68	62.009	ENSMGAG00000011020	POLR1C	79	62.009	Meleagris_gallopavo
ENSORLG00020005555	polr1c	68	59.389	ENSMAUG00000014329	Polr1c	65	59.389	Mesocricetus_auratus
ENSORLG00020005555	polr1c	81	51.095	ENSMICG00000005027	POLR1C	78	49.407	Microcebus_murinus
ENSORLG00020005555	polr1c	68	59.825	ENSMOCG00000017549	Polr1c	65	59.825	Microtus_ochrogaster
ENSORLG00020005555	polr1c	81	51.527	ENSMMOG00000005380	polr1c	73	51.527	Mola_mola
ENSORLG00020005555	polr1c	81	53.455	ENSMODG00000018964	POLR1C	91	53.455	Monodelphis_domestica
ENSORLG00020005555	polr1c	81	51.812	ENSMALG00000011711	polr1c	73	51.812	Monopterus_albus
ENSORLG00020005555	polr1c	68	59.389	MGP_CAROLIEiJ_G0021662	Polr1c	87	59.389	Mus_caroli
ENSORLG00020005555	polr1c	68	59.825	ENSMUSG00000067148	Polr1c	87	59.825	Mus_musculus
ENSORLG00020005555	polr1c	68	59.825	MGP_PahariEiJ_G0020654	Polr1c	87	59.825	Mus_pahari
ENSORLG00020005555	polr1c	68	60.262	MGP_SPRETEiJ_G0022574	Polr1c	87	60.262	Mus_spretus
ENSORLG00020005555	polr1c	68	59.389	ENSMPUG00000012916	POLR1C	59	59.389	Mustela_putorius_furo
ENSORLG00020005555	polr1c	68	59.825	ENSMLUG00000017751	POLR1C	65	59.825	Myotis_lucifugus
ENSORLG00020005555	polr1c	81	52.920	ENSNGAG00000023487	Polr1c	91	52.727	Nannospalax_galili
ENSORLG00020005555	polr1c	81	68.750	ENSNBRG00000018742	polr1c	76	69.259	Neolamprologus_brichardi
ENSORLG00020005555	polr1c	68	58.515	ENSNLEG00000004035	POLR1C	65	58.515	Nomascus_leucogenys
ENSORLG00020005555	polr1c	81	41.241	ENSMEUG00000006778	POLR1C	76	41.241	Notamacropus_eugenii
ENSORLG00020005555	polr1c	60	59.901	ENSODEG00000017109	-	92	59.901	Octodon_degus
ENSORLG00020005555	polr1c	68	61.135	ENSODEG00000015831	-	65	61.135	Octodon_degus
ENSORLG00020005555	polr1c	81	67.754	ENSONIG00000013133	polr1c	76	67.754	Oreochromis_niloticus
ENSORLG00020005555	polr1c	81	52.190	ENSOANG00000003043	POLR1C	76	52.190	Ornithorhynchus_anatinus
ENSORLG00020005555	polr1c	68	58.079	ENSOCUG00000005504	POLR1C	65	58.079	Oryctolagus_cuniculus
ENSORLG00020005555	polr1c	81	76.087	ENSORLG00000019743	polr1c	77	76.087	Oryzias_latipes
ENSORLG00020005555	polr1c	81	76.449	ENSORLG00015013322	polr1c	77	76.449	Oryzias_latipes_hsok
ENSORLG00020005555	polr1c	81	73.551	ENSOMEG00000016527	polr1c	77	73.551	Oryzias_melastigma
ENSORLG00020005555	polr1c	68	59.389	ENSOGAG00000016318	POLR1C	65	59.389	Otolemur_garnettii
ENSORLG00020005555	polr1c	68	59.389	ENSOARG00000007503	POLR1C	65	59.389	Ovis_aries
ENSORLG00020005555	polr1c	68	58.952	ENSPPAG00000043678	POLR1C	65	58.515	Pan_paniscus
ENSORLG00020005555	polr1c	68	59.389	ENSPPRG00000009760	POLR1C	65	59.389	Panthera_pardus
ENSORLG00020005555	polr1c	68	59.389	ENSPTIG00000014813	POLR1C	65	59.389	Panthera_tigris_altaica
ENSORLG00020005555	polr1c	68	58.952	ENSPTRG00000018202	POLR1C	65	58.515	Pan_troglodytes
ENSORLG00020005555	polr1c	68	58.952	ENSPANG00000009025	POLR1C	64	58.952	Papio_anubis
ENSORLG00020005555	polr1c	81	59.783	ENSPKIG00000009858	polr1c	77	59.783	Paramormyrops_kingsleyae
ENSORLG00020005555	polr1c	81	56.569	ENSPSIG00000012580	POLR1C	72	56.569	Pelodiscus_sinensis
ENSORLG00020005555	polr1c	81	49.638	ENSPMGG00000012121	polr1c	73	49.638	Periophthalmus_magnuspinnatus
ENSORLG00020005555	polr1c	68	59.389	ENSPEMG00000006970	Polr1c	65	59.389	Peromyscus_maniculatus_bairdii
ENSORLG00020005555	polr1c	81	53.480	ENSPMAG00000005560	polr1c	76	53.480	Petromyzon_marinus
ENSORLG00020005555	polr1c	81	54.380	ENSPCIG00000028137	POLR1C	75	54.380	Phascolarctos_cinereus
ENSORLG00020005555	polr1c	81	67.647	ENSPFOG00000014342	POLR1C	77	67.391	Poecilia_formosa
ENSORLG00020005555	polr1c	81	67.391	ENSPFOG00000014357	polr1c	76	67.391	Poecilia_formosa
ENSORLG00020005555	polr1c	57	77.436	ENSPLAG00000004111	polr1c	85	76.585	Poecilia_latipinna
ENSORLG00020005555	polr1c	81	67.647	ENSPMEG00000011877	-	77	67.391	Poecilia_mexicana
ENSORLG00020005555	polr1c	81	67.647	ENSPMEG00000008420	polr1c	77	67.391	Poecilia_mexicana
ENSORLG00020005555	polr1c	81	66.304	ENSPREG00000007985	polr1c	77	66.304	Poecilia_reticulata
ENSORLG00020005555	polr1c	68	58.952	ENSPPYG00000016645	POLR1C	66	58.515	Pongo_abelii
ENSORLG00020005555	polr1c	68	58.079	ENSPCOG00000024628	POLR1C	65	58.079	Propithecus_coquereli
ENSORLG00020005555	polr1c	68	52.838	ENSPVAG00000005689	POLR1C	65	52.838	Pteropus_vampyrus
ENSORLG00020005555	polr1c	81	68.889	ENSPNYG00000003620	polr1c	76	68.889	Pundamilia_nyererei
ENSORLG00020005555	polr1c	81	63.139	ENSPNAG00000008443	polr1c	82	62.909	Pygocentrus_nattereri
ENSORLG00020005555	polr1c	68	59.389	ENSRNOG00000019079	Polr1c	87	59.389	Rattus_norvegicus
ENSORLG00020005555	polr1c	68	58.515	ENSRBIG00000007155	POLR1C	65	58.079	Rhinopithecus_bieti
ENSORLG00020005555	polr1c	68	58.952	ENSRROG00000000257	POLR1C	65	58.515	Rhinopithecus_roxellana
ENSORLG00020005555	polr1c	69	41.631	YPR110C	RPC40	68	41.631	Saccharomyces_cerevisiae
ENSORLG00020005555	polr1c	68	58.515	ENSSBOG00000025735	POLR1C	65	57.488	Saimiri_boliviensis_boliviensis
ENSORLG00020005555	polr1c	68	62.445	ENSSHAG00000014456	POLR1C	66	62.445	Sarcophilus_harrisii
ENSORLG00020005555	polr1c	81	60.145	ENSSFOG00015019860	polr1c	77	60.145	Scleropages_formosus
ENSORLG00020005555	polr1c	81	64.855	ENSSMAG00000018865	polr1c	76	64.855	Scophthalmus_maximus
ENSORLG00020005555	polr1c	81	66.667	ENSSDUG00000015745	polr1c	70	67.153	Seriola_dumerili
ENSORLG00020005555	polr1c	81	66.667	ENSSLDG00000018285	polr1c	70	67.153	Seriola_lalandi_dorsalis
ENSORLG00020005555	polr1c	68	65.789	ENSSPUG00000011822	POLR1C	65	65.789	Sphenodon_punctatus
ENSORLG00020005555	polr1c	81	65.942	ENSSPAG00000022369	polr1c	76	66.423	Stegastes_partitus
ENSORLG00020005555	polr1c	68	58.952	ENSSSCG00000028007	POLR1C	73	58.952	Sus_scrofa
ENSORLG00020005555	polr1c	81	55.109	ENSTGUG00000009159	POLR1C	78	55.109	Taeniopygia_guttata
ENSORLG00020005555	polr1c	81	63.869	ENSTRUG00000006264	polr1c	76	63.869	Takifugu_rubripes
ENSORLG00020005555	polr1c	68	58.952	ENSTTRG00000006344	POLR1C	64	58.952	Tursiops_truncatus
ENSORLG00020005555	polr1c	68	59.389	ENSUAMG00000025602	POLR1C	65	59.389	Ursus_americanus
ENSORLG00020005555	polr1c	68	59.389	ENSUMAG00000005938	POLR1C	65	59.389	Ursus_maritimus
ENSORLG00020005555	polr1c	68	59.633	ENSVVUG00000028922	POLR1C	64	59.633	Vulpes_vulpes
ENSORLG00020005555	polr1c	68	56.522	ENSXETG00000010882	polr1c	65	56.522	Xenopus_tropicalis
ENSORLG00020005555	polr1c	81	66.176	ENSXCOG00000014185	polr1c	77	66.176	Xiphophorus_couchianus
ENSORLG00020005555	polr1c	81	66.544	ENSXMAG00000015076	polr1c	76	67.037	Xiphophorus_maculatus