EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020005613 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 4461 bases
Position: chr1:12220856-12225316
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020004816	MMR_HSR1	PF01926.23	1.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020007338	-	4387	-	ENSORLP00020004816	538 (aa)	-	-

Gene Model

Click here to download ENSORLG00020005613's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020005613's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020005613	-	53	37.500	ENSORLG00020016100	-	73	34.278
ENSORLG00020005613	-	66	34.121	ENSORLG00020014225	-	61	39.357
ENSORLG00020005613	-	64	33.989	ENSORLG00020008404	-	70	37.795

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020005613	-	97	53.448	ENSAPOG00000007181	-	99	52.581	Acanthochromis_polyacanthus
ENSORLG00020005613	-	50	37.546	ENSACIG00000012714	-	86	36.822	Amphilophus_citrinellus
ENSORLG00020005613	-	50	35.870	ENSACIG00000019149	-	83	36.691	Amphilophus_citrinellus
ENSORLG00020005613	-	50	37.956	ENSACIG00000022355	-	85	38.189	Amphilophus_citrinellus
ENSORLG00020005613	-	50	37.407	ENSACIG00000016635	-	88	38.153	Amphilophus_citrinellus
ENSORLG00020005613	-	50	63.569	ENSATEG00000019504	-	82	65.432	Anabas_testudineus
ENSORLG00020005613	-	88	32.359	ENSACLG00000005625	-	85	31.818	Astatotilapia_calliptera
ENSORLG00020005613	-	51	39.298	ENSACLG00000005659	-	84	40.310	Astatotilapia_calliptera
ENSORLG00020005613	-	50	33.688	ENSAMXG00000036554	-	67	35.586	Astyanax_mexicanus
ENSORLG00020005613	-	63	32.386	ENSAMXG00000035548	-	54	38.189	Astyanax_mexicanus
ENSORLG00020005613	-	51	33.448	ENSAMXG00000035963	-	92	31.650	Astyanax_mexicanus
ENSORLG00020005613	-	50	38.519	ENSAMXG00000013450	-	68	39.759	Astyanax_mexicanus
ENSORLG00020005613	-	51	31.047	ENSAMXG00000039994	-	93	33.579	Astyanax_mexicanus
ENSORLG00020005613	-	83	32.569	ENSAMXG00000043838	-	68	30.672	Astyanax_mexicanus
ENSORLG00020005613	-	51	36.264	ENSAMXG00000031962	-	74	38.938	Astyanax_mexicanus
ENSORLG00020005613	-	54	33.106	ENSCSEG00000006826	-	75	32.727	Cynoglossus_semilaevis
ENSORLG00020005613	-	52	35.739	ENSCVAG00000000429	-	79	35.827	Cyprinodon_variegatus
ENSORLG00020005613	-	79	32.080	ENSCVAG00000018793	-	54	39.286	Cyprinodon_variegatus
ENSORLG00020005613	-	50	39.852	ENSCVAG00000005473	-	86	39.689	Cyprinodon_variegatus
ENSORLG00020005613	-	100	63.451	ENSCVAG00000006929	-	99	63.451	Cyprinodon_variegatus
ENSORLG00020005613	-	63	35.977	ENSDARG00000079471	si:dkey-88j15.4	56	37.313	Danio_rerio
ENSORLG00020005613	-	50	37.037	ENSDARG00000052876	CR933791.2	65	39.819	Danio_rerio
ENSORLG00020005613	-	51	32.967	ENSELUG00000007650	-	74	34.177	Esox_lucius
ENSORLG00020005613	-	50	32.862	ENSFHEG00000014906	-	81	32.374	Fundulus_heteroclitus
ENSORLG00020005613	-	62	37.982	ENSFHEG00000013922	-	69	40.392	Fundulus_heteroclitus
ENSORLG00020005613	-	100	63.080	ENSGAFG00000020589	-	97	63.080	Gambusia_affinis
ENSORLG00020005613	-	55	37.000	ENSGAFG00000017534	-	82	36.900	Gambusia_affinis
ENSORLG00020005613	-	63	55.457	ENSGACG00000016194	-	100	56.757	Gasterosteus_aculeatus
ENSORLG00020005613	-	52	38.869	ENSHBUG00000016739	-	75	38.800	Haplochromis_burtoni
ENSORLG00020005613	-	97	46.552	ENSHCOG00000000067	-	98	44.925	Hippocampus_comes
ENSORLG00020005613	-	54	33.019	ENSIPUG00000009955	-	77	32.701	Ictalurus_punctatus
ENSORLG00020005613	-	53	38.947	ENSKMAG00000010832	-	73	40.948	Kryptolebias_marmoratus
ENSORLG00020005613	-	53	67.832	ENSKMAG00000000074	-	95	67.832	Kryptolebias_marmoratus
ENSORLG00020005613	-	52	34.722	ENSLBEG00000004167	-	82	36.842	Labrus_bergylta
ENSORLG00020005613	-	64	33.973	ENSLBEG00000017905	-	83	42.857	Labrus_bergylta
ENSORLG00020005613	-	50	35.821	ENSLOCG00000002945	-	67	35.821	Lepisosteus_oculatus
ENSORLG00020005613	-	54	55.709	ENSMAMG00000020006	-	81	58.268	Mastacembelus_armatus
ENSORLG00020005613	-	50	36.630	ENSMZEG00005026687	-	76	36.614	Maylandia_zebra
ENSORLG00020005613	-	50	42.066	ENSMZEG00005020801	-	78	42.688	Maylandia_zebra
ENSORLG00020005613	-	50	44.485	ENSMZEG00005016562	-	87	45.417	Maylandia_zebra
ENSORLG00020005613	-	62	35.312	ENSMZEG00005021247	-	75	36.890	Maylandia_zebra
ENSORLG00020005613	-	54	35.906	ENSMZEG00005027854	-	82	38.039	Maylandia_zebra
ENSORLG00020005613	-	67	35.263	ENSMALG00000008656	-	67	33.256	Monopterus_albus
ENSORLG00020005613	-	54	37.143	ENSNBRG00000023111	-	82	37.066	Neolamprologus_brichardi
ENSORLG00020005613	-	62	33.923	ENSNBRG00000005951	-	58	41.379	Neolamprologus_brichardi
ENSORLG00020005613	-	51	36.727	ENSNBRG00000005934	-	73	37.349	Neolamprologus_brichardi
ENSORLG00020005613	-	54	40.068	ENSNBRG00000004025	-	86	44.493	Neolamprologus_brichardi
ENSORLG00020005613	-	50	40.000	ENSONIG00000014258	-	78	39.844	Oreochromis_niloticus
ENSORLG00020005613	-	51	36.918	ENSONIG00000014260	-	81	38.306	Oreochromis_niloticus
ENSORLG00020005613	-	51	35.496	ENSONIG00000012313	-	93	39.013	Oreochromis_niloticus
ENSORLG00020005613	-	52	36.426	ENSONIG00000000240	-	88	36.923	Oreochromis_niloticus
ENSORLG00020005613	-	100	98.513	ENSORLG00000026303	-	100	98.513	Oryzias_latipes
ENSORLG00020005613	-	100	98.885	ENSORLG00015003237	-	100	98.885	Oryzias_latipes_hsok
ENSORLG00020005613	-	53	40.278	ENSPMGG00000001433	-	80	41.833	Periophthalmus_magnuspinnatus
ENSORLG00020005613	-	52	36.237	ENSPMGG00000024067	-	76	39.062	Periophthalmus_magnuspinnatus
ENSORLG00020005613	-	56	36.246	ENSPFOG00000000263	-	77	35.769	Poecilia_formosa
ENSORLG00020005613	-	75	60.961	ENSPFOG00000009457	-	100	54.839	Poecilia_formosa
ENSORLG00020005613	-	60	34.756	ENSPLAG00000003471	-	56	39.524	Poecilia_latipinna
ENSORLG00020005613	-	57	34.936	ENSPMEG00000018453	-	66	40.291	Poecilia_mexicana
ENSORLG00020005613	-	56	36.842	ENSPREG00000016801	-	65	42.857	Poecilia_reticulata
ENSORLG00020005613	-	53	37.113	ENSPREG00000015263	-	89	38.189	Poecilia_reticulata
ENSORLG00020005613	-	50	31.818	ENSPNYG00000013308	-	79	32.103	Pundamilia_nyererei
ENSORLG00020005613	-	53	36.713	ENSPNYG00000004179	-	74	37.402	Pundamilia_nyererei
ENSORLG00020005613	-	61	36.778	ENSPNYG00000004123	-	59	42.029	Pundamilia_nyererei
ENSORLG00020005613	-	67	33.429	ENSPNAG00000026004	-	64	30.896	Pygocentrus_nattereri
ENSORLG00020005613	-	51	35.636	ENSPNAG00000008992	-	64	38.017	Pygocentrus_nattereri
ENSORLG00020005613	-	56	35.231	ENSPNAG00000025977	-	67	30.260	Pygocentrus_nattereri
ENSORLG00020005613	-	76	32.297	ENSPNAG00000025951	-	53	30.962	Pygocentrus_nattereri
ENSORLG00020005613	-	56	36.918	ENSPNAG00000026043	-	63	31.529	Pygocentrus_nattereri
ENSORLG00020005613	-	66	35.635	ENSPNAG00000026220	-	69	38.846	Pygocentrus_nattereri
ENSORLG00020005613	-	50	35.971	ENSPNAG00000008987	-	58	38.272	Pygocentrus_nattereri
ENSORLG00020005613	-	66	35.376	ENSPNAG00000025944	-	68	31.306	Pygocentrus_nattereri
ENSORLG00020005613	-	67	35.262	ENSPNAG00000004032	-	61	34.249	Pygocentrus_nattereri
ENSORLG00020005613	-	70	33.590	ENSSFOG00015006469	-	61	37.054	Scleropages_formosus
ENSORLG00020005613	-	55	31.561	ENSSFOG00015015949	si:ch1073-185p12.2	58	32.927	Scleropages_formosus
ENSORLG00020005613	-	50	38.603	ENSSLDG00000013116	-	91	37.743	Seriola_lalandi_dorsalis
ENSORLG00020005613	-	51	35.401	ENSSLDG00000001623	-	92	35.409	Seriola_lalandi_dorsalis
ENSORLG00020005613	-	51	32.903	ENSXCOG00000012536	-	71	41.791	Xiphophorus_couchianus
ENSORLG00020005613	-	55	35.144	ENSXMAG00000028084	-	81	35.424	Xiphophorus_maculatus
ENSORLG00020005613	-	55	36.066	ENSXMAG00000029429	-	81	37.500	Xiphophorus_maculatus