EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020005680 (Gene tree)
Gene ID: -
Gene Symbol: mccc1
Alias: -
Full Name: methylcrotonoyl-CoA carboxylase 1 (alpha)
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 7752 bases
Position: chr4:18316784-18324535
Accession: ZDB-GENE-050208-450
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020004895	RimK	PF08443.11	1.9e-05	1	1
ENSORLP00020024315	RimK	PF08443.11	2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020007261	-	2738	-	ENSORLP00020024315	718 (aa)	-	-
ENSORLT00020007212	-	2417	-	ENSORLP00020004895	702 (aa)	-	-

Gene Model

Click here to download ENSORLG00020005680's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020005680's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020005680	mccc1	95	41.850	ENSORLG00020005749	pcca	92	41.916

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020005680	mccc1	99	70.376	ENSG00000078070	MCCC1	96	80.529	Homo_sapiens
ENSORLG00020005680	mccc1	99	69.828	ENSAMEG00000015967	MCCC1	95	70.145	Ailuropoda_melanoleuca
ENSORLG00020005680	mccc1	78	86.837	ENSACIG00000023146	mccc1	96	92.689	Amphilophus_citrinellus
ENSORLG00020005680	mccc1	98	73.160	ENSAPLG00000008989	MCCC1	96	73.431	Anas_platyrhynchos
ENSORLG00020005680	mccc1	98	69.710	ENSANAG00000028235	MCCC1	97	78.998	Aotus_nancymaae
ENSORLG00020005680	mccc1	99	88.235	ENSACLG00000026110	mccc1	97	89.371	Astatotilapia_calliptera
ENSORLG00020005680	mccc1	98	78.663	ENSAMXG00000001531	mccc1	98	78.693	Astyanax_mexicanus
ENSORLG00020005680	mccc1	99	70.851	ENSBTAG00000006548	MCCC1	95	70.725	Bos_taurus
ENSORLG00020005680	mccc1	98	68.116	ENSCJAG00000005103	MCCC1	97	79.714	Callithrix_jacchus
ENSORLG00020005680	mccc1	99	70.360	ENSCAFG00000011749	MCCC1	95	70.435	Canis_familiaris
ENSORLG00020005680	mccc1	99	70.360	ENSCAFG00020001000	MCCC1	95	70.435	Canis_lupus_dingo
ENSORLG00020005680	mccc1	99	70.563	ENSCHIG00000025794	MCCC1	98	69.452	Capra_hircus
ENSORLG00020005680	mccc1	99	71.367	ENSTSYG00000012606	MCCC1	95	81.553	Carlito_syrichta
ENSORLG00020005680	mccc1	95	69.276	ENSCAPG00000012269	MCCC1	97	69.151	Cavia_aperea
ENSORLG00020005680	mccc1	98	69.130	ENSCPOG00000010866	MCCC1	95	68.687	Cavia_porcellus
ENSORLG00020005680	mccc1	99	70.520	ENSCATG00000037699	MCCC1	97	80.191	Cercocebus_atys
ENSORLG00020005680	mccc1	84	71.647	ENSCLAG00000014174	MCCC1	98	71.647	Chinchilla_lanigera
ENSORLG00020005680	mccc1	99	71.098	ENSCSAG00000013226	MCCC1	95	70.707	Chlorocebus_sabaeus
ENSORLG00020005680	mccc1	99	72.701	ENSCPBG00000000534	MCCC1	97	72.478	Chrysemys_picta_bellii
ENSORLG00020005680	mccc1	96	58.576	ENSCING00000019260	-	92	59.057	Ciona_intestinalis
ENSORLG00020005680	mccc1	96	58.892	ENSCING00000020099	-	98	58.910	Ciona_intestinalis
ENSORLG00020005680	mccc1	96	55.780	ENSCSAVG00000007062	-	99	55.415	Ciona_savignyi
ENSORLG00020005680	mccc1	87	70.847	ENSCANG00000037917	MCCC1	98	80.697	Colobus_angolensis_palliatus
ENSORLG00020005680	mccc1	97	71.072	ENSCGRG00001012469	Mccc1	96	70.580	Cricetulus_griseus_chok1gshd
ENSORLG00020005680	mccc1	97	71.072	ENSCGRG00000002616	Mccc1	98	69.986	Cricetulus_griseus_crigri
ENSORLG00020005680	mccc1	98	89.374	ENSCSEG00000019501	mccc1	97	89.047	Cynoglossus_semilaevis
ENSORLG00020005680	mccc1	98	80.233	ENSDARG00000102538	mccc1	98	79.090	Danio_rerio
ENSORLG00020005680	mccc1	99	69.814	ENSDNOG00000012070	MCCC1	94	70.102	Dasypus_novemcinctus
ENSORLG00020005680	mccc1	99	68.156	ENSDORG00000000473	Mccc1	97	70.359	Dipodomys_ordii
ENSORLG00020005680	mccc1	96	70.431	ENSETEG00000008384	MCCC1	92	70.633	Echinops_telfairi
ENSORLG00020005680	mccc1	57	76.238	ENSEBUG00000016250	-	97	75.550	Eptatretus_burgeri
ENSORLG00020005680	mccc1	99	71.470	ENSEASG00005015339	MCCC1	97	82.181	Equus_asinus_asinus
ENSORLG00020005680	mccc1	99	71.429	ENSECAG00000008214	MCCC1	94	71.806	Equus_caballus
ENSORLG00020005680	mccc1	88	63.446	ENSEEUG00000011233	MCCC1	89	63.446	Erinaceus_europaeus
ENSORLG00020005680	mccc1	97	83.088	ENSELUG00000010299	mccc1	98	84.211	Esox_lucius
ENSORLG00020005680	mccc1	88	70.894	ENSFCAG00000000940	MCCC1	95	81.796	Felis_catus
ENSORLG00020005680	mccc1	98	74.530	ENSFALG00000008252	MCCC1	96	74.348	Ficedula_albicollis
ENSORLG00020005680	mccc1	97	67.836	ENSFDAG00000009183	MCCC1	96	67.335	Fukomys_damarensis
ENSORLG00020005680	mccc1	97	83.235	ENSGMOG00000008521	mccc1	100	82.690	Gadus_morhua
ENSORLG00020005680	mccc1	99	71.469	ENSGALG00000008785	MCCC1	93	72.057	Gallus_gallus
ENSORLG00020005680	mccc1	100	88.440	ENSGAFG00000010643	mccc1	98	88.478	Gambusia_affinis
ENSORLG00020005680	mccc1	93	73.628	ENSGAGG00000000770	MCCC1	98	73.920	Gopherus_agassizii
ENSORLG00020005680	mccc1	99	70.809	ENSGGOG00000002784	MCCC1	96	81.250	Gorilla_gorilla
ENSORLG00020005680	mccc1	99	88.235	ENSHBUG00000000956	mccc1	98	88.336	Haplochromis_burtoni
ENSORLG00020005680	mccc1	99	70.418	ENSHGLG00000014650	MCCC1	95	70.130	Heterocephalus_glaber_female
ENSORLG00020005680	mccc1	99	70.563	ENSHGLG00100015295	MCCC1	95	70.274	Heterocephalus_glaber_male
ENSORLG00020005680	mccc1	95	85.778	ENSHCOG00000010503	mccc1	97	85.778	Hippocampus_comes
ENSORLG00020005680	mccc1	97	80.848	ENSIPUG00000024615	mccc1	98	79.516	Ictalurus_punctatus
ENSORLG00020005680	mccc1	99	70.935	ENSSTOG00000010361	MCCC1	95	71.014	Ictidomys_tridecemlineatus
ENSORLG00020005680	mccc1	98	66.860	ENSJJAG00000003543	Mccc1	95	66.813	Jaculus_jaculus
ENSORLG00020005680	mccc1	95	90.991	ENSLBEG00000001741	mccc1	91	91.018	Labrus_bergylta
ENSORLG00020005680	mccc1	99	76.259	ENSLACG00000018119	MCCC1	99	74.965	Latimeria_chalumnae
ENSORLG00020005680	mccc1	99	71.591	ENSLOCG00000000778	mccc1	98	70.787	Lepisosteus_oculatus
ENSORLG00020005680	mccc1	99	69.986	ENSLAFG00000018018	MCCC1	96	69.841	Loxodonta_africana
ENSORLG00020005680	mccc1	99	70.954	ENSMFAG00000000043	MCCC1	97	80.668	Macaca_fascicularis
ENSORLG00020005680	mccc1	88	70.340	ENSMMUG00000010553	MCCC1	97	81.951	Macaca_mulatta
ENSORLG00020005680	mccc1	98	66.761	ENSMNEG00000017163	MCCC1	97	76.485	Macaca_nemestrina
ENSORLG00020005680	mccc1	99	68.064	ENSMLEG00000039351	MCCC1	97	80.191	Mandrillus_leucophaeus
ENSORLG00020005680	mccc1	97	88.693	ENSMZEG00005015532	mccc1	98	88.336	Maylandia_zebra
ENSORLG00020005680	mccc1	96	74.405	ENSMGAG00000009494	MCCC1	96	74.849	Meleagris_gallopavo
ENSORLG00020005680	mccc1	99	71.367	ENSMICG00000048884	MCCC1	96	82.169	Microcebus_murinus
ENSORLG00020005680	mccc1	98	70.102	ENSMOCG00000003671	Mccc1	96	69.710	Microtus_ochrogaster
ENSORLG00020005680	mccc1	99	71.223	ENSMODG00000021288	MCCC1	94	71.491	Monodelphis_domestica
ENSORLG00020005680	mccc1	98	71.159	MGP_CAROLIEiJ_G0024932	Mccc1	96	71.014	Mus_caroli
ENSORLG00020005680	mccc1	98	71.594	ENSMUSG00000027709	Mccc1	96	71.304	Mus_musculus
ENSORLG00020005680	mccc1	98	71.739	MGP_SPRETEiJ_G0025866	Mccc1	96	71.449	Mus_spretus
ENSORLG00020005680	mccc1	99	70.690	ENSMPUG00000002371	MCCC1	86	71.345	Mustela_putorius_furo
ENSORLG00020005680	mccc1	99	70.173	ENSMLUG00000012257	MCCC1	95	70.546	Myotis_lucifugus
ENSORLG00020005680	mccc1	99	72.006	ENSNGAG00000001216	Mccc1	99	71.124	Nannospalax_galili
ENSORLG00020005680	mccc1	99	69.408	ENSNLEG00000005989	MCCC1	96	80.769	Nomascus_leucogenys
ENSORLG00020005680	mccc1	99	66.714	ENSOPRG00000007258	MCCC1	97	66.335	Ochotona_princeps
ENSORLG00020005680	mccc1	98	69.855	ENSODEG00000012286	MCCC1	95	71.021	Octodon_degus
ENSORLG00020005680	mccc1	100	88.022	ENSONIG00000008395	mccc1	98	88.905	Oreochromis_niloticus
ENSORLG00020005680	mccc1	94	72.686	ENSOANG00000011253	MCCC1	98	72.994	Ornithorhynchus_anatinus
ENSORLG00020005680	mccc1	99	65.612	ENSOCUG00000012393	MCCC1	96	65.230	Oryctolagus_cuniculus
ENSORLG00020005680	mccc1	100	99.025	ENSORLG00000011678	mccc1	100	99.025	Oryzias_latipes
ENSORLG00020005680	mccc1	97	99.122	ENSORLG00015003526	mccc1	98	99.122	Oryzias_latipes_hsok
ENSORLG00020005680	mccc1	100	94.290	ENSOMEG00000011470	mccc1	98	94.595	Oryzias_melastigma
ENSORLG00020005680	mccc1	93	70.795	ENSOGAG00000000659	MCCC1	98	71.118	Otolemur_garnettii
ENSORLG00020005680	mccc1	99	70.851	ENSOARG00000020660	MCCC1	98	71.366	Ovis_aries
ENSORLG00020005680	mccc1	99	70.087	ENSPPAG00000036167	MCCC1	96	80.288	Pan_paniscus
ENSORLG00020005680	mccc1	88	70.894	ENSPPRG00000000127	MCCC1	95	82.039	Panthera_pardus
ENSORLG00020005680	mccc1	99	70.259	ENSPTIG00000018514	MCCC1	95	81.311	Panthera_tigris_altaica
ENSORLG00020005680	mccc1	99	70.087	ENSPTRG00000015662	MCCC1	96	80.529	Pan_troglodytes
ENSORLG00020005680	mccc1	99	70.954	ENSPANG00000006870	MCCC1	97	80.430	Papio_anubis
ENSORLG00020005680	mccc1	99	72.845	ENSPSIG00000017510	MCCC1	99	73.217	Pelodiscus_sinensis
ENSORLG00020005680	mccc1	94	80.635	ENSPMGG00000000155	mccc1	95	80.635	Periophthalmus_magnuspinnatus
ENSORLG00020005680	mccc1	98	71.076	ENSPEMG00000014164	Mccc1	96	70.725	Peromyscus_maniculatus_bairdii
ENSORLG00020005680	mccc1	99	70.563	ENSPCIG00000013027	MCCC1	81	70.640	Phascolarctos_cinereus
ENSORLG00020005680	mccc1	99	88.701	ENSPFOG00000019171	mccc1	98	89.047	Poecilia_formosa
ENSORLG00020005680	mccc1	98	88.905	ENSPLAG00000022735	mccc1	98	88.905	Poecilia_latipinna
ENSORLG00020005680	mccc1	98	88.905	ENSPMEG00000000664	mccc1	98	88.905	Poecilia_mexicana
ENSORLG00020005680	mccc1	99	70.954	ENSPPYG00000014331	MCCC1	95	70.563	Pongo_abelii
ENSORLG00020005680	mccc1	98	65.072	ENSPCAG00000003195	MCCC1	95	64.791	Procavia_capensis
ENSORLG00020005680	mccc1	99	71.223	ENSPCOG00000020095	MCCC1	96	81.446	Propithecus_coquereli
ENSORLG00020005680	mccc1	97	66.569	ENSPVAG00000013436	MCCC1	96	66.569	Pteropus_vampyrus
ENSORLG00020005680	mccc1	97	75.585	ENSPNAG00000025069	mccc1	96	75.620	Pygocentrus_nattereri
ENSORLG00020005680	mccc1	98	71.325	ENSRNOG00000013293	Mccc1	96	70.725	Rattus_norvegicus
ENSORLG00020005680	mccc1	99	70.954	ENSRBIG00000038726	MCCC1	96	81.250	Rhinopithecus_bieti
ENSORLG00020005680	mccc1	99	70.665	ENSRROG00000041247	MCCC1	96	81.010	Rhinopithecus_roxellana
ENSORLG00020005680	mccc1	94	71.842	ENSSBOG00000026219	MCCC1	98	80.430	Saimiri_boliviensis_boliviensis
ENSORLG00020005680	mccc1	99	71.306	ENSSHAG00000016104	MCCC1	98	71.553	Sarcophilus_harrisii
ENSORLG00020005680	mccc1	98	79.883	ENSSFOG00015007784	mccc1	99	78.329	Scleropages_formosus
ENSORLG00020005680	mccc1	98	87.624	ENSSMAG00000019667	mccc1	98	87.624	Scophthalmus_maximus
ENSORLG00020005680	mccc1	94	74.203	ENSSPUG00000014366	MCCC1	98	74.422	Sphenodon_punctatus
ENSORLG00020005680	mccc1	97	90.882	ENSSPAG00000011206	mccc1	98	90.612	Stegastes_partitus
ENSORLG00020005680	mccc1	98	67.493	ENSSSCG00000025942	MCCC1	98	71.181	Sus_scrofa
ENSORLG00020005680	mccc1	96	74.851	ENSTGUG00000010506	MCCC1	98	75.151	Taeniopygia_guttata
ENSORLG00020005680	mccc1	96	68.852	ENSTBEG00000007988	MCCC1	98	68.919	Tupaia_belangeri
ENSORLG00020005680	mccc1	99	71.470	ENSTTRG00000016518	MCCC1	95	71.449	Tursiops_truncatus
ENSORLG00020005680	mccc1	62	78.440	ENSUAMG00000008378	MCCC1	98	81.068	Ursus_americanus
ENSORLG00020005680	mccc1	99	69.828	ENSUMAG00000006927	MCCC1	95	70.145	Ursus_maritimus
ENSORLG00020005680	mccc1	99	69.640	ENSVVUG00000006835	MCCC1	95	69.710	Vulpes_vulpes
ENSORLG00020005680	mccc1	99	73.487	ENSXETG00000016826	mccc1	99	72.316	Xenopus_tropicalis