EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020005727 (Gene tree)
Gene ID: -
Gene Symbol: mrpl40
Alias: -
Full Name: mitochondrial ribosomal protein L40
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 3363 bases
Position: chr9:5667502-5670864
Accession: ZDB-GENE-040912-37
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020024369	MRP-L28	PF09812.9	6.9e-55	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020007135	-	2801	-	ENSORLP00020024369	203 (aa)	-	-

Gene Model

Click here to download ENSORLG00020005727's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020005727's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020005727	mrpl40	77	63.291	ENSG00000185608	MRPL40	77	63.291	Homo_sapiens
ENSORLG00020005727	mrpl40	100	75.862	ENSAPOG00000021291	mrpl40	100	75.862	Acanthochromis_polyacanthus
ENSORLG00020005727	mrpl40	77	59.494	ENSAMEG00000011421	MRPL40	77	59.494	Ailuropoda_melanoleuca
ENSORLG00020005727	mrpl40	100	78.325	ENSACIG00000006672	mrpl40	100	78.325	Amphilophus_citrinellus
ENSORLG00020005727	mrpl40	100	64.532	ENSACIG00000006717	MRPL40	96	61.650	Amphilophus_citrinellus
ENSORLG00020005727	mrpl40	100	79.310	ENSAOCG00000003216	mrpl40	100	79.310	Amphiprion_ocellaris
ENSORLG00020005727	mrpl40	100	78.818	ENSAPEG00000017401	mrpl40	100	78.818	Amphiprion_percula
ENSORLG00020005727	mrpl40	76	85.065	ENSATEG00000020753	mrpl40	91	85.065	Anabas_testudineus
ENSORLG00020005727	mrpl40	81	62.048	ENSAPLG00000004002	MRPL40	83	62.048	Anas_platyrhynchos
ENSORLG00020005727	mrpl40	81	61.212	ENSACAG00000001053	MRPL40	83	61.212	Anolis_carolinensis
ENSORLG00020005727	mrpl40	77	63.291	ENSANAG00000026579	MRPL40	77	63.291	Aotus_nancymaae
ENSORLG00020005727	mrpl40	100	82.759	ENSACLG00000011106	mrpl40	100	82.759	Astatotilapia_calliptera
ENSORLG00020005727	mrpl40	100	61.084	ENSAMXG00000029691	mrpl40	100	61.084	Astyanax_mexicanus
ENSORLG00020005727	mrpl40	77	61.392	ENSBTAG00000019891	MRPL40	98	51.923	Bos_taurus
ENSORLG00020005727	mrpl40	73	35.484	WBGene00018793	mrpl-40	62	36.441	Caenorhabditis_elegans
ENSORLG00020005727	mrpl40	77	64.557	ENSCJAG00000001584	MRPL40	76	64.557	Callithrix_jacchus
ENSORLG00020005727	mrpl40	77	63.291	ENSCAFG00020007995	MRPL40	77	63.291	Canis_lupus_dingo
ENSORLG00020005727	mrpl40	77	62.025	ENSCHIG00000000131	-	80	61.783	Capra_hircus
ENSORLG00020005727	mrpl40	62	55.906	ENSCHIG00000026872	-	100	43.678	Capra_hircus
ENSORLG00020005727	mrpl40	77	64.557	ENSTSYG00000014747	MRPL40	78	64.557	Carlito_syrichta
ENSORLG00020005727	mrpl40	67	65.693	ENSCAPG00000012876	MRPL40	85	67.769	Cavia_aperea
ENSORLG00020005727	mrpl40	69	65.000	ENSCPOG00000026802	MRPL40	77	65.190	Cavia_porcellus
ENSORLG00020005727	mrpl40	77	63.057	ENSCCAG00000037694	MRPL40	79	63.057	Cebus_capucinus
ENSORLG00020005727	mrpl40	77	62.658	ENSCATG00000043592	-	78	62.658	Cercocebus_atys
ENSORLG00020005727	mrpl40	77	63.291	ENSCATG00000031418	-	77	63.291	Cercocebus_atys
ENSORLG00020005727	mrpl40	77	63.291	ENSCLAG00000016629	MRPL40	77	63.291	Chinchilla_lanigera
ENSORLG00020005727	mrpl40	77	63.924	ENSCSAG00000011593	MRPL40	77	63.924	Chlorocebus_sabaeus
ENSORLG00020005727	mrpl40	69	55.319	ENSCHOG00000008751	MRPL40	93	54.217	Choloepus_hoffmanni
ENSORLG00020005727	mrpl40	81	58.182	ENSCPBG00000010618	MRPL40	86	58.182	Chrysemys_picta_bellii
ENSORLG00020005727	mrpl40	63	38.583	ENSCSAVG00000001505	-	54	40.000	Ciona_savignyi
ENSORLG00020005727	mrpl40	77	63.924	ENSCANG00000038600	MRPL40	84	63.924	Colobus_angolensis_palliatus
ENSORLG00020005727	mrpl40	100	53.431	ENSCGRG00001019957	Mrpl40	98	53.431	Cricetulus_griseus_chok1gshd
ENSORLG00020005727	mrpl40	100	53.431	ENSCGRG00000001245	Mrpl40	98	53.431	Cricetulus_griseus_crigri
ENSORLG00020005727	mrpl40	86	45.856	ENSCSEG00000012296	-	98	43.646	Cynoglossus_semilaevis
ENSORLG00020005727	mrpl40	100	72.549	ENSCSEG00000019750	mrpl40	100	72.549	Cynoglossus_semilaevis
ENSORLG00020005727	mrpl40	100	79.803	ENSCVAG00000018229	mrpl40	100	79.803	Cyprinodon_variegatus
ENSORLG00020005727	mrpl40	81	65.060	ENSDARG00000043554	mrpl40	100	57.073	Danio_rerio
ENSORLG00020005727	mrpl40	69	57.857	ENSDNOG00000038360	-	75	54.487	Dasypus_novemcinctus
ENSORLG00020005727	mrpl40	77	64.557	ENSDORG00000002949	Mrpl40	77	64.557	Dipodomys_ordii
ENSORLG00020005727	mrpl40	75	42.857	FBgn0037892	mRpL40	82	42.500	Drosophila_melanogaster
ENSORLG00020005727	mrpl40	78	60.377	ENSEASG00005010493	MRPL40	78	60.377	Equus_asinus_asinus
ENSORLG00020005727	mrpl40	78	59.375	ENSECAG00000009876	MRPL40	96	59.375	Equus_caballus
ENSORLG00020005727	mrpl40	78	61.006	ENSEEUG00000009268	MRPL40	77	61.006	Erinaceus_europaeus
ENSORLG00020005727	mrpl40	100	72.059	ENSELUG00000009281	mrpl40	100	72.059	Esox_lucius
ENSORLG00020005727	mrpl40	77	60.127	ENSFCAG00000002752	MRPL40	77	60.127	Felis_catus
ENSORLG00020005727	mrpl40	81	61.818	ENSFALG00000007981	MRPL40	83	61.818	Ficedula_albicollis
ENSORLG00020005727	mrpl40	77	59.873	ENSFDAG00000020940	MRPL40	97	59.873	Fukomys_damarensis
ENSORLG00020005727	mrpl40	82	62.874	ENSGALG00000053063	MRPL40	56	62.874	Gallus_gallus
ENSORLG00020005727	mrpl40	100	78.818	ENSGAFG00000000522	mrpl40	100	78.818	Gambusia_affinis
ENSORLG00020005727	mrpl40	81	60.606	ENSGAGG00000020728	MRPL40	80	60.606	Gopherus_agassizii
ENSORLG00020005727	mrpl40	77	63.291	ENSGGOG00000012336	MRPL40	77	63.291	Gorilla_gorilla
ENSORLG00020005727	mrpl40	100	82.759	ENSHBUG00000000404	mrpl40	100	82.759	Haplochromis_burtoni
ENSORLG00020005727	mrpl40	77	63.694	ENSHGLG00000018525	MRPL40	97	63.694	Heterocephalus_glaber_female
ENSORLG00020005727	mrpl40	78	63.522	ENSHGLG00100009563	MRPL40	77	63.924	Heterocephalus_glaber_male
ENSORLG00020005727	mrpl40	100	73.399	ENSHCOG00000005731	mrpl40	100	73.399	Hippocampus_comes
ENSORLG00020005727	mrpl40	100	62.927	ENSIPUG00000020288	Mrpl40	97	62.927	Ictalurus_punctatus
ENSORLG00020005727	mrpl40	77	63.291	ENSSTOG00000002887	MRPL40	77	63.291	Ictidomys_tridecemlineatus
ENSORLG00020005727	mrpl40	77	63.291	ENSJJAG00000017905	Mrpl40	77	63.291	Jaculus_jaculus
ENSORLG00020005727	mrpl40	100	73.399	ENSKMAG00000003717	mrpl40	100	73.399	Kryptolebias_marmoratus
ENSORLG00020005727	mrpl40	100	68.932	ENSLBEG00000025203	mrpl40	100	68.932	Labrus_bergylta
ENSORLG00020005727	mrpl40	81	63.473	ENSLACG00000015070	MRPL40	82	63.473	Latimeria_chalumnae
ENSORLG00020005727	mrpl40	81	76.506	ENSLOCG00000001879	mrpl40	100	66.019	Lepisosteus_oculatus
ENSORLG00020005727	mrpl40	77	62.025	ENSLAFG00000011061	MRPL40	77	62.025	Loxodonta_africana
ENSORLG00020005727	mrpl40	77	63.291	ENSMFAG00000032018	-	77	63.291	Macaca_fascicularis
ENSORLG00020005727	mrpl40	77	60.759	ENSMFAG00000001495	-	78	60.759	Macaca_fascicularis
ENSORLG00020005727	mrpl40	77	61.392	ENSMFAG00000039890	-	84	61.392	Macaca_fascicularis
ENSORLG00020005727	mrpl40	77	60.127	ENSMMUG00000006218	-	88	60.127	Macaca_mulatta
ENSORLG00020005727	mrpl40	77	60.759	ENSMMUG00000030886	-	77	60.759	Macaca_mulatta
ENSORLG00020005727	mrpl40	77	62.025	ENSMNEG00000041171	-	79	62.025	Macaca_nemestrina
ENSORLG00020005727	mrpl40	84	55.556	ENSMNEG00000040492	-	89	52.047	Macaca_nemestrina
ENSORLG00020005727	mrpl40	77	62.025	ENSMNEG00000034050	-	77	62.025	Macaca_nemestrina
ENSORLG00020005727	mrpl40	77	60.759	ENSMLEG00000009022	-	84	60.759	Mandrillus_leucophaeus
ENSORLG00020005727	mrpl40	77	63.924	ENSMLEG00000030926	-	84	63.924	Mandrillus_leucophaeus
ENSORLG00020005727	mrpl40	77	62.658	ENSMLEG00000032552	-	78	62.658	Mandrillus_leucophaeus
ENSORLG00020005727	mrpl40	100	79.310	ENSMAMG00000014249	mrpl40	100	79.310	Mastacembelus_armatus
ENSORLG00020005727	mrpl40	100	82.759	ENSMZEG00005009853	mrpl40	100	82.759	Maylandia_zebra
ENSORLG00020005727	mrpl40	76	65.161	ENSMGAG00000001177	MRPL40	100	65.161	Meleagris_gallopavo
ENSORLG00020005727	mrpl40	77	64.557	ENSMAUG00000015350	Mrpl40	77	64.557	Mesocricetus_auratus
ENSORLG00020005727	mrpl40	78	61.006	ENSMICG00000046066	MRPL40	77	61.392	Microcebus_murinus
ENSORLG00020005727	mrpl40	77	63.291	ENSMOCG00000016970	Mrpl40	98	53.659	Microtus_ochrogaster
ENSORLG00020005727	mrpl40	76	86.364	ENSMMOG00000012861	mrpl40	84	86.364	Mola_mola
ENSORLG00020005727	mrpl40	81	59.639	ENSMODG00000010070	MRPL40	91	59.639	Monodelphis_domestica
ENSORLG00020005727	mrpl40	100	75.862	ENSMALG00000020778	mrpl40	100	75.862	Monopterus_albus
ENSORLG00020005727	mrpl40	77	64.557	MGP_CAROLIEiJ_G0020557	Mrpl40	97	64.331	Mus_caroli
ENSORLG00020005727	mrpl40	77	64.557	ENSMUSG00000022706	Mrpl40	97	64.331	Mus_musculus
ENSORLG00020005727	mrpl40	77	65.190	MGP_PahariEiJ_G0016262	Mrpl40	97	64.968	Mus_pahari
ENSORLG00020005727	mrpl40	77	64.557	MGP_SPRETEiJ_G0021452	Mrpl40	97	64.331	Mus_spretus
ENSORLG00020005727	mrpl40	77	59.494	ENSMPUG00000003865	MRPL40	77	59.494	Mustela_putorius_furo
ENSORLG00020005727	mrpl40	77	62.025	ENSMLUG00000024620	-	77	62.025	Myotis_lucifugus
ENSORLG00020005727	mrpl40	77	62.025	ENSMLUG00000002456	-	77	62.025	Myotis_lucifugus
ENSORLG00020005727	mrpl40	77	63.291	ENSNGAG00000000304	Mrpl40	78	63.291	Nannospalax_galili
ENSORLG00020005727	mrpl40	69	62.857	ENSNLEG00000005372	MRPL40	77	62.658	Nomascus_leucogenys
ENSORLG00020005727	mrpl40	54	54.545	ENSMEUG00000003868	-	75	54.545	Notamacropus_eugenii
ENSORLG00020005727	mrpl40	77	63.291	ENSODEG00000017051	MRPL40	77	63.291	Octodon_degus
ENSORLG00020005727	mrpl40	100	81.773	ENSONIG00000014393	mrpl40	100	81.773	Oreochromis_niloticus
ENSORLG00020005727	mrpl40	77	63.924	ENSOCUG00000009859	MRPL40	57	63.924	Oryctolagus_cuniculus
ENSORLG00020005727	mrpl40	100	98.030	ENSORLG00000002574	mrpl40	100	98.030	Oryzias_latipes
ENSORLG00020005727	mrpl40	100	98.522	ENSORLG00015015422	mrpl40	100	98.522	Oryzias_latipes_hsok
ENSORLG00020005727	mrpl40	100	89.655	ENSOMEG00000017632	mrpl40	100	89.655	Oryzias_melastigma
ENSORLG00020005727	mrpl40	77	63.291	ENSOGAG00000030071	MRPL40	84	63.291	Otolemur_garnettii
ENSORLG00020005727	mrpl40	77	60.759	ENSOARG00000017561	MRPL40	76	60.759	Ovis_aries
ENSORLG00020005727	mrpl40	77	63.924	ENSPPAG00000030349	MRPL40	77	63.924	Pan_paniscus
ENSORLG00020005727	mrpl40	77	60.127	ENSPPRG00000004672	MRPL40	77	60.127	Panthera_pardus
ENSORLG00020005727	mrpl40	77	60.127	ENSPTIG00000003393	MRPL40	77	60.127	Panthera_tigris_altaica
ENSORLG00020005727	mrpl40	77	63.924	ENSPTRG00000014061	MRPL40	77	63.924	Pan_troglodytes
ENSORLG00020005727	mrpl40	77	63.291	ENSPANG00000007370	-	77	63.291	Papio_anubis
ENSORLG00020005727	mrpl40	77	63.291	ENSPANG00000000595	-	78	63.291	Papio_anubis
ENSORLG00020005727	mrpl40	100	59.512	ENSPKIG00000024494	mrpl40	100	60.000	Paramormyrops_kingsleyae
ENSORLG00020005727	mrpl40	81	58.788	ENSPSIG00000003055	MRPL40	100	58.788	Pelodiscus_sinensis
ENSORLG00020005727	mrpl40	100	67.488	ENSPMGG00000018388	mrpl40	100	67.488	Periophthalmus_magnuspinnatus
ENSORLG00020005727	mrpl40	77	63.291	ENSPEMG00000017933	Mrpl40	77	63.291	Peromyscus_maniculatus_bairdii
ENSORLG00020005727	mrpl40	77	58.228	ENSPCIG00000025479	MRPL40	77	58.228	Phascolarctos_cinereus
ENSORLG00020005727	mrpl40	100	78.641	ENSPFOG00000012506	mrpl40	97	78.641	Poecilia_formosa
ENSORLG00020005727	mrpl40	100	79.310	ENSPLAG00000017335	mrpl40	100	79.310	Poecilia_latipinna
ENSORLG00020005727	mrpl40	100	80.296	ENSPMEG00000003881	mrpl40	100	80.296	Poecilia_mexicana
ENSORLG00020005727	mrpl40	100	80.788	ENSPREG00000011448	mrpl40	100	80.788	Poecilia_reticulata
ENSORLG00020005727	mrpl40	77	63.924	ENSPPYG00000011578	MRPL40	84	63.924	Pongo_abelii
ENSORLG00020005727	mrpl40	64	60.769	ENSPCAG00000007834	MRPL40	59	62.810	Procavia_capensis
ENSORLG00020005727	mrpl40	77	61.392	ENSPCOG00000014413	MRPL40	77	61.392	Propithecus_coquereli
ENSORLG00020005727	mrpl40	100	82.759	ENSPNYG00000008216	mrpl40	100	82.759	Pundamilia_nyererei
ENSORLG00020005727	mrpl40	100	66.010	ENSPNAG00000000310	mrpl40	99	75.974	Pygocentrus_nattereri
ENSORLG00020005727	mrpl40	77	63.924	ENSRNOG00000049686	Mrpl40	77	63.924	Rattus_norvegicus
ENSORLG00020005727	mrpl40	77	63.924	ENSRBIG00000023060	MRPL40	77	63.924	Rhinopithecus_bieti
ENSORLG00020005727	mrpl40	77	62.658	ENSRROG00000043837	MRPL40	77	62.658	Rhinopithecus_roxellana
ENSORLG00020005727	mrpl40	77	62.658	ENSSBOG00000031050	MRPL40	77	62.658	Saimiri_boliviensis_boliviensis
ENSORLG00020005727	mrpl40	77	60.759	ENSSHAG00000010239	MRPL40	98	60.759	Sarcophilus_harrisii
ENSORLG00020005727	mrpl40	81	67.470	ENSSFOG00015014220	mrpl40	85	67.470	Scleropages_formosus
ENSORLG00020005727	mrpl40	100	74.020	ENSSMAG00000006340	mrpl40	100	74.020	Scophthalmus_maximus
ENSORLG00020005727	mrpl40	100	75.490	ENSSDUG00000022994	mrpl40	100	75.490	Seriola_dumerili
ENSORLG00020005727	mrpl40	100	75.000	ENSSLDG00000009671	mrpl40	100	75.000	Seriola_lalandi_dorsalis
ENSORLG00020005727	mrpl40	77	62.658	ENSSARG00000003051	MRPL40	77	62.658	Sorex_araneus
ENSORLG00020005727	mrpl40	81	59.036	ENSSPUG00000015559	MRPL40	83	60.843	Sphenodon_punctatus
ENSORLG00020005727	mrpl40	100	79.803	ENSSPAG00000015481	mrpl40	100	79.803	Stegastes_partitus
ENSORLG00020005727	mrpl40	78	60.377	ENSSSCG00000034014	MRPL40	77	60.759	Sus_scrofa
ENSORLG00020005727	mrpl40	60	63.934	ENSTGUG00000008534	MRPL40	100	64.286	Taeniopygia_guttata
ENSORLG00020005727	mrpl40	99	75.622	ENSTRUG00000025904	mrpl40	100	75.622	Takifugu_rubripes
ENSORLG00020005727	mrpl40	77	60.759	ENSTTRG00000014932	MRPL40	78	60.759	Tursiops_truncatus
ENSORLG00020005727	mrpl40	77	60.759	ENSUAMG00000007667	MRPL40	77	60.759	Ursus_americanus
ENSORLG00020005727	mrpl40	71	58.219	ENSUMAG00000006804	MRPL40	77	58.219	Ursus_maritimus
ENSORLG00020005727	mrpl40	77	62.025	ENSVVUG00000025360	-	77	62.025	Vulpes_vulpes
ENSORLG00020005727	mrpl40	69	51.408	ENSVVUG00000020719	-	74	51.572	Vulpes_vulpes
ENSORLG00020005727	mrpl40	81	61.818	ENSXETG00000018600	mrpl40	83	61.818	Xenopus_tropicalis
ENSORLG00020005727	mrpl40	100	79.310	ENSXCOG00000002135	mrpl40	100	79.310	Xiphophorus_couchianus
ENSORLG00020005727	mrpl40	100	79.803	ENSXMAG00000014595	mrpl40	100	79.803	Xiphophorus_maculatus