EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020005858 (Gene tree)
Gene ID: -
Gene Symbol: zmat3
Alias: -
Full Name: zinc finger%2C matrin-type 3
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 11781 bases
Position: chr4:18262654-18274434
Accession: ZDB-GENE-130530-881
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020005081	zf-met	PF12874.7	8.9e-22	1	3
ENSORLP00020005081	zf-met	PF12874.7	8.9e-22	2	3
ENSORLP00020005081	zf-met	PF12874.7	8.9e-22	3	3
ENSORLP00020005081	zf-C2H2_jaz	PF12171.8	1.9e-19	1	3
ENSORLP00020005081	zf-C2H2_jaz	PF12171.8	1.9e-19	2	3
ENSORLP00020005081	zf-C2H2_jaz	PF12171.8	1.9e-19	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020006894	-	1772	-	ENSORLP00020005081	490 (aa)	-	-

Gene Model

Click here to download ENSORLG00020005858's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020005858's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020005858	zmat3	100	80.404	ENSAPOG00000015037	zmat3	100	80.000	Acanthochromis_polyacanthus
ENSORLG00020005858	zmat3	80	66.575	ENSACIG00000023037	zmat3	99	68.023	Amphilophus_citrinellus
ENSORLG00020005858	zmat3	100	80.404	ENSAOCG00000017955	zmat3	100	80.404	Amphiprion_ocellaris
ENSORLG00020005858	zmat3	57	82.918	ENSAPEG00000014553	zmat3	97	82.918	Amphiprion_percula
ENSORLG00020005858	zmat3	54	81.061	ENSATEG00000022244	zmat3	90	81.569	Anabas_testudineus
ENSORLG00020005858	zmat3	58	60.410	ENSAPLG00000013292	ZMAT3	80	67.782	Anas_platyrhynchos
ENSORLG00020005858	zmat3	51	65.476	ENSACAG00000005005	ZMAT3	83	65.476	Anolis_carolinensis
ENSORLG00020005858	zmat3	100	79.798	ENSACLG00000026272	zmat3	98	83.922	Astatotilapia_calliptera
ENSORLG00020005858	zmat3	71	57.584	ENSAMXG00000009798	zmat3	64	74.153	Astyanax_mexicanus
ENSORLG00020005858	zmat3	99	68.902	ENSCSEG00000019463	zmat3	99	68.902	Cynoglossus_semilaevis
ENSORLG00020005858	zmat3	100	76.861	ENSCVAG00000011847	zmat3	100	76.707	Cyprinodon_variegatus
ENSORLG00020005858	zmat3	75	63.758	ENSDARG00000080021	zmat3	99	66.078	Danio_rerio
ENSORLG00020005858	zmat3	57	47.312	ENSETEG00000008883	ZMAT3	74	59.669	Echinops_telfairi
ENSORLG00020005858	zmat3	52	58.140	ENSEEUG00000001126	ZMAT3	83	58.268	Erinaceus_europaeus
ENSORLG00020005858	zmat3	64	74.502	ENSELUG00000010132	zmat3	82	74.502	Esox_lucius
ENSORLG00020005858	zmat3	58	59.794	ENSFALG00000008403	ZMAT3	80	66.946	Ficedula_albicollis
ENSORLG00020005858	zmat3	61	81.041	ENSFHEG00000003221	zmat3	87	86.000	Fundulus_heteroclitus
ENSORLG00020005858	zmat3	51	75.600	ENSGMOG00000008558	zmat3	100	75.600	Gadus_morhua
ENSORLG00020005858	zmat3	58	60.554	ENSGALG00000040948	ZMAT3	89	67.782	Gallus_gallus
ENSORLG00020005858	zmat3	56	78.261	ENSGACG00000006175	zmat3	95	82.353	Gasterosteus_aculeatus
ENSORLG00020005858	zmat3	100	80.202	ENSHBUG00000004401	zmat3	100	80.202	Haplochromis_burtoni
ENSORLG00020005858	zmat3	69	70.710	ENSHCOG00000010624	zmat3	100	70.088	Hippocampus_comes
ENSORLG00020005858	zmat3	98	55.682	ENSIPUG00000003043	zmat3	89	69.421	Ictalurus_punctatus
ENSORLG00020005858	zmat3	100	79.798	ENSKMAG00000008962	zmat3	100	80.606	Kryptolebias_marmoratus
ENSORLG00020005858	zmat3	61	80.812	ENSLBEG00000001993	zmat3	87	83.333	Labrus_bergylta
ENSORLG00020005858	zmat3	59	54.575	ENSLACG00000015780	ZMAT3	65	62.400	Latimeria_chalumnae
ENSORLG00020005858	zmat3	67	73.729	ENSLOCG00000001108	zmat3	64	73.729	Lepisosteus_oculatus
ENSORLG00020005858	zmat3	100	76.970	ENSMAMG00000012349	zmat3	100	76.970	Mastacembelus_armatus
ENSORLG00020005858	zmat3	91	80.222	ENSMZEG00005015427	zmat3	100	84.800	Maylandia_zebra
ENSORLG00020005858	zmat3	58	60.900	ENSMGAG00000009873	ZMAT3	80	67.782	Meleagris_gallopavo
ENSORLG00020005858	zmat3	55	61.053	ENSMAUG00000001986	Zmat3	78	67.949	Mesocricetus_auratus
ENSORLG00020005858	zmat3	55	60.554	ENSMOCG00000018844	Zmat3	78	67.521	Microtus_ochrogaster
ENSORLG00020005858	zmat3	68	75.821	ENSMMOG00000001603	zmat3	100	75.821	Mola_mola
ENSORLG00020005858	zmat3	100	74.949	ENSMALG00000019683	zmat3	96	79.094	Monopterus_albus
ENSORLG00020005858	zmat3	56	60.410	ENSMLUG00000013074	ZMAT3	78	67.373	Myotis_lucifugus
ENSORLG00020005858	zmat3	66	77.855	ENSNBRG00000020886	zmat3	100	68.155	Neolamprologus_brichardi
ENSORLG00020005858	zmat3	51	64.800	ENSMEUG00000015724	ZMAT3	82	65.200	Notamacropus_eugenii
ENSORLG00020005858	zmat3	68	73.373	ENSONIG00000008388	zmat3	99	74.850	Oreochromis_niloticus
ENSORLG00020005858	zmat3	57	48.971	ENSOANG00000009901	ZMAT3	59	60.714	Ornithorhynchus_anatinus
ENSORLG00020005858	zmat3	100	98.367	ENSORLG00000011575	zmat3	100	98.367	Oryzias_latipes
ENSORLG00020005858	zmat3	100	97.959	ENSORLG00015003707	zmat3	100	97.959	Oryzias_latipes_hsok
ENSORLG00020005858	zmat3	100	94.694	ENSOMEG00000011303	zmat3	100	94.694	Oryzias_melastigma
ENSORLG00020005858	zmat3	52	63.118	ENSPANG00000023167	ZMAT3	80	67.227	Papio_anubis
ENSORLG00020005858	zmat3	71	70.518	ENSPKIG00000023370	zmat3	95	69.600	Paramormyrops_kingsleyae
ENSORLG00020005858	zmat3	54	73.962	ENSPMGG00000023924	zmat3	89	76.400	Periophthalmus_magnuspinnatus
ENSORLG00020005858	zmat3	90	75.068	ENSPFOG00000019206	zmat3	100	75.482	Poecilia_formosa
ENSORLG00020005858	zmat3	62	83.270	ENSPLAG00000022572	zmat3	99	66.572	Poecilia_latipinna
ENSORLG00020005858	zmat3	64	68.621	ENSPMEG00000004131	-	100	60.597	Poecilia_mexicana
ENSORLG00020005858	zmat3	100	77.328	ENSPREG00000022632	zmat3	100	77.530	Poecilia_reticulata
ENSORLG00020005858	zmat3	66	77.855	ENSPNYG00000014350	zmat3	100	68.155	Pundamilia_nyererei
ENSORLG00020005858	zmat3	77	65.000	ENSPNAG00000015664	zmat3	95	71.042	Pygocentrus_nattereri
ENSORLG00020005858	zmat3	51	62.302	ENSSHAG00000016154	ZMAT3	82	64.400	Sarcophilus_harrisii
ENSORLG00020005858	zmat3	51	70.120	ENSSFOG00015006984	zmat3	88	64.336	Scleropages_formosus
ENSORLG00020005858	zmat3	92	73.002	ENSSMAG00000019540	-	99	74.342	Scophthalmus_maximus
ENSORLG00020005858	zmat3	68	78.507	ENSSDUG00000016188	zmat3	100	78.507	Seriola_dumerili
ENSORLG00020005858	zmat3	99	78.252	ENSSLDG00000018611	zmat3	100	78.507	Seriola_lalandi_dorsalis
ENSORLG00020005858	zmat3	67	80.547	ENSSPAG00000011062	zmat3	100	80.547	Stegastes_partitus
ENSORLG00020005858	zmat3	58	61.324	ENSSSCG00000033860	ZMAT3	80	69.167	Sus_scrofa
ENSORLG00020005858	zmat3	58	59.386	ENSTGUG00000010765	-	80	66.946	Taeniopygia_guttata
ENSORLG00020005858	zmat3	64	72.204	ENSTRUG00000004788	zmat3	86	82.400	Takifugu_rubripes
ENSORLG00020005858	zmat3	54	80.682	ENSTNIG00000006781	zmat3	100	77.778	Tetraodon_nigroviridis
ENSORLG00020005858	zmat3	53	59.160	ENSXETG00000007251	zmat3	77	64.255	Xenopus_tropicalis
ENSORLG00020005858	zmat3	57	79.643	ENSXCOG00000008397	zmat3	86	85.200	Xiphophorus_couchianus
ENSORLG00020005858	zmat3	100	75.911	ENSXMAG00000015188	zmat3	100	75.506	Xiphophorus_maculatus