EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020005879 (Gene tree)
Gene ID: -
Gene Symbol: utp20
Alias: -
Full Name: UTP20 small subunit (SSU) processome component
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 35107 bases
Position: chr23:1309030-1344136
Accession: ZDB-GENE-080225-38
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020004992	DRIM	PF07539.12	2.6e-149	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020007044	-	7533	-	ENSORLP00020004992	2511 (aa)	-	-

Gene Model

Click here to download ENSORLG00020005879's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020005879's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020005879	utp20	99	56.127	ENSG00000120800	UTP20	93	56.127	Homo_sapiens
ENSORLG00020005879	utp20	99	74.932	ENSAPOG00000002429	utp20	95	75.103	Acanthochromis_polyacanthus
ENSORLG00020005879	utp20	99	54.641	ENSAMEG00000016416	UTP20	94	54.641	Ailuropoda_melanoleuca
ENSORLG00020005879	utp20	100	73.431	ENSACIG00000007987	utp20	95	74.268	Amphilophus_citrinellus
ENSORLG00020005879	utp20	61	78.457	ENSAOCG00000015055	utp20	96	73.735	Amphiprion_ocellaris
ENSORLG00020005879	utp20	99	74.044	ENSAPEG00000011605	utp20	95	75.070	Amphiprion_percula
ENSORLG00020005879	utp20	99	75.300	ENSATEG00000005601	utp20	97	75.601	Anabas_testudineus
ENSORLG00020005879	utp20	99	54.439	ENSAPLG00000015651	UTP20	94	54.348	Anas_platyrhynchos
ENSORLG00020005879	utp20	99	54.852	ENSACAG00000011671	UTP20	94	54.852	Anolis_carolinensis
ENSORLG00020005879	utp20	99	55.063	ENSANAG00000027152	UTP20	94	55.063	Aotus_nancymaae
ENSORLG00020005879	utp20	100	72.070	ENSACLG00000008064	utp20	98	72.212	Astatotilapia_calliptera
ENSORLG00020005879	utp20	100	64.233	ENSAMXG00000021039	utp20	94	64.404	Astyanax_mexicanus
ENSORLG00020005879	utp20	99	56.118	ENSBTAG00000003239	UTP20	96	54.545	Bos_taurus
ENSORLG00020005879	utp20	100	55.462	ENSCJAG00000001913	UTP20	94	55.462	Callithrix_jacchus
ENSORLG00020005879	utp20	99	54.008	ENSCAFG00000006964	UTP20	94	54.008	Canis_familiaris
ENSORLG00020005879	utp20	99	54.008	ENSCAFG00020024305	UTP20	94	54.008	Canis_lupus_dingo
ENSORLG00020005879	utp20	99	55.485	ENSCHIG00000009221	UTP20	94	55.485	Capra_hircus
ENSORLG00020005879	utp20	99	54.430	ENSTSYG00000003040	UTP20	94	54.430	Carlito_syrichta
ENSORLG00020005879	utp20	99	55.142	ENSCAPG00000014920	UTP20	94	55.142	Cavia_aperea
ENSORLG00020005879	utp20	100	55.042	ENSCPOG00000003129	UTP20	94	55.042	Cavia_porcellus
ENSORLG00020005879	utp20	99	54.852	ENSCCAG00000031422	UTP20	94	54.852	Cebus_capucinus
ENSORLG00020005879	utp20	99	54.545	ENSCATG00000035636	UTP20	94	54.545	Cercocebus_atys
ENSORLG00020005879	utp20	100	55.252	ENSCLAG00000011569	UTP20	94	55.252	Chinchilla_lanigera
ENSORLG00020005879	utp20	99	56.025	ENSCSAG00000003388	UTP20	94	56.025	Chlorocebus_sabaeus
ENSORLG00020005879	utp20	90	63.636	ENSCHOG00000003532	UTP20	86	63.636	Choloepus_hoffmanni
ENSORLG00020005879	utp20	95	54.673	ENSCPBG00000004844	UTP20	94	54.442	Chrysemys_picta_bellii
ENSORLG00020005879	utp20	91	38.983	ENSCING00000003395	-	86	38.983	Ciona_intestinalis
ENSORLG00020005879	utp20	89	36.639	ENSCSAVG00000008252	-	90	36.639	Ciona_savignyi
ENSORLG00020005879	utp20	94	55.180	ENSCANG00000034768	UTP20	98	50.374	Colobus_angolensis_palliatus
ENSORLG00020005879	utp20	99	54.641	ENSCGRG00001017151	Utp20	94	54.641	Cricetulus_griseus_chok1gshd
ENSORLG00020005879	utp20	99	54.641	ENSCGRG00000008595	Utp20	94	54.641	Cricetulus_griseus_crigri
ENSORLG00020005879	utp20	99	71.349	ENSCSEG00000014760	utp20	99	71.215	Cynoglossus_semilaevis
ENSORLG00020005879	utp20	99	75.923	ENSCVAG00000001727	utp20	96	75.923	Cyprinodon_variegatus
ENSORLG00020005879	utp20	100	65.196	ENSDARG00000099280	utp20	94	65.657	Danio_rerio
ENSORLG00020005879	utp20	99	55.485	ENSDNOG00000016845	UTP20	93	55.485	Dasypus_novemcinctus
ENSORLG00020005879	utp20	99	55.652	ENSDORG00000014762	Utp20	94	55.652	Dipodomys_ordii
ENSORLG00020005879	utp20	88	68.116	ENSETEG00000019983	UTP20	83	68.116	Echinops_telfairi
ENSORLG00020005879	utp20	99	53.911	ENSEASG00005019981	UTP20	97	51.757	Equus_asinus_asinus
ENSORLG00020005879	utp20	99	52.986	ENSECAG00000006876	UTP20	96	53.030	Equus_caballus
ENSORLG00020005879	utp20	71	60.714	ENSEEUG00000003774	UTP20	70	58.824	Erinaceus_europaeus
ENSORLG00020005879	utp20	100	67.715	ENSELUG00000000798	utp20	95	67.715	Esox_lucius
ENSORLG00020005879	utp20	99	54.527	ENSFCAG00000006150	UTP20	95	54.527	Felis_catus
ENSORLG00020005879	utp20	94	54.014	ENSFALG00000011135	UTP20	94	54.292	Ficedula_albicollis
ENSORLG00020005879	utp20	97	55.672	ENSFDAG00000007567	UTP20	93	55.672	Fukomys_damarensis
ENSORLG00020005879	utp20	99	74.327	ENSFHEG00000004142	utp20	99	74.336	Fundulus_heteroclitus
ENSORLG00020005879	utp20	99	67.158	ENSGMOG00000006762	utp20	95	67.158	Gadus_morhua
ENSORLG00020005879	utp20	99	54.852	ENSGALG00000011643	UTP20	94	54.852	Gallus_gallus
ENSORLG00020005879	utp20	99	73.616	ENSGAFG00000006986	utp20	99	73.774	Gambusia_affinis
ENSORLG00020005879	utp20	99	74.177	ENSGACG00000019092	utp20	93	74.003	Gasterosteus_aculeatus
ENSORLG00020005879	utp20	69	54.545	ENSGAGG00000011169	UTP20	93	54.385	Gopherus_agassizii
ENSORLG00020005879	utp20	99	55.286	ENSGGOG00000004904	UTP20	93	55.286	Gorilla_gorilla
ENSORLG00020005879	utp20	99	74.207	ENSHBUG00000010613	utp20	94	75.053	Haplochromis_burtoni
ENSORLG00020005879	utp20	99	55.042	ENSHGLG00000006422	UTP20	94	55.042	Heterocephalus_glaber_female
ENSORLG00020005879	utp20	99	55.042	ENSHGLG00100001086	UTP20	94	55.042	Heterocephalus_glaber_male
ENSORLG00020005879	utp20	99	71.130	ENSHCOG00000005421	utp20	93	70.813	Hippocampus_comes
ENSORLG00020005879	utp20	100	64.894	ENSIPUG00000013717	utp20	93	64.666	Ictalurus_punctatus
ENSORLG00020005879	utp20	100	55.042	ENSSTOG00000015995	UTP20	94	55.042	Ictidomys_tridecemlineatus
ENSORLG00020005879	utp20	99	52.218	ENSJJAG00000019321	Utp20	98	52.012	Jaculus_jaculus
ENSORLG00020005879	utp20	99	74.496	ENSKMAG00000005972	utp20	98	73.839	Kryptolebias_marmoratus
ENSORLG00020005879	utp20	100	73.266	ENSLBEG00000000781	utp20	99	73.446	Labrus_bergylta
ENSORLG00020005879	utp20	81	58.037	ENSLACG00000010098	UTP20	95	58.278	Latimeria_chalumnae
ENSORLG00020005879	utp20	93	62.658	ENSLOCG00000015197	utp20	88	71.186	Lepisosteus_oculatus
ENSORLG00020005879	utp20	100	52.374	ENSLAFG00000012983	UTP20	95	53.285	Loxodonta_africana
ENSORLG00020005879	utp20	99	54.968	ENSMFAG00000037766	UTP20	94	54.968	Macaca_fascicularis
ENSORLG00020005879	utp20	99	55.391	ENSMMUG00000012891	UTP20	94	55.391	Macaca_mulatta
ENSORLG00020005879	utp20	99	55.180	ENSMNEG00000037418	UTP20	94	55.180	Macaca_nemestrina
ENSORLG00020005879	utp20	99	54.757	ENSMLEG00000029148	UTP20	94	54.757	Mandrillus_leucophaeus
ENSORLG00020005879	utp20	98	73.573	ENSMAMG00000002063	utp20	94	73.573	Mastacembelus_armatus
ENSORLG00020005879	utp20	100	71.004	ENSMZEG00005018123	utp20	98	72.091	Maylandia_zebra
ENSORLG00020005879	utp20	99	54.316	ENSMGAG00000011726	UTP20	94	54.316	Meleagris_gallopavo
ENSORLG00020005879	utp20	65	55.063	ENSMAUG00000011898	Utp20	95	55.063	Mesocricetus_auratus
ENSORLG00020005879	utp20	99	55.042	ENSMICG00000015736	UTP20	94	55.042	Microcebus_murinus
ENSORLG00020005879	utp20	99	51.435	ENSMOCG00000015242	Utp20	98	51.146	Microtus_ochrogaster
ENSORLG00020005879	utp20	98	70.675	ENSMMOG00000003360	utp20	94	70.675	Mola_mola
ENSORLG00020005879	utp20	99	56.936	ENSMODG00000003141	UTP20	95	56.936	Monodelphis_domestica
ENSORLG00020005879	utp20	99	73.139	ENSMALG00000002723	utp20	94	72.727	Monopterus_albus
ENSORLG00020005879	utp20	99	55.363	MGP_CAROLIEiJ_G0015713	Utp20	94	55.180	Mus_caroli
ENSORLG00020005879	utp20	99	55.331	ENSMUSG00000004356	Utp20	94	55.063	Mus_musculus
ENSORLG00020005879	utp20	99	55.421	MGP_PahariEiJ_G0031372	Utp20	94	54.852	Mus_pahari
ENSORLG00020005879	utp20	99	55.516	MGP_SPRETEiJ_G0016531	Utp20	89	69.048	Mus_spretus
ENSORLG00020005879	utp20	100	55.252	ENSMPUG00000011641	UTP20	94	55.252	Mustela_putorius_furo
ENSORLG00020005879	utp20	99	55.063	ENSMLUG00000002313	UTP20	94	55.063	Myotis_lucifugus
ENSORLG00020005879	utp20	99	54.430	ENSNGAG00000013738	Utp20	94	54.430	Nannospalax_galili
ENSORLG00020005879	utp20	73	92.537	ENSNBRG00000019464	utp20	93	92.537	Neolamprologus_brichardi
ENSORLG00020005879	utp20	99	55.063	ENSNLEG00000006166	UTP20	94	55.063	Nomascus_leucogenys
ENSORLG00020005879	utp20	86	63.415	ENSMEUG00000015457	UTP20	81	63.415	Notamacropus_eugenii
ENSORLG00020005879	utp20	87	72.611	ENSOPRG00000010546	UTP20	81	72.611	Ochotona_princeps
ENSORLG00020005879	utp20	100	54.832	ENSODEG00000013411	UTP20	94	54.832	Octodon_degus
ENSORLG00020005879	utp20	100	74.268	ENSONIG00000009910	utp20	96	75.694	Oreochromis_niloticus
ENSORLG00020005879	utp20	99	56.745	ENSOANG00000005578	UTP20	94	56.025	Ornithorhynchus_anatinus
ENSORLG00020005879	utp20	99	54.219	ENSOCUG00000010475	UTP20	94	54.219	Oryctolagus_cuniculus
ENSORLG00020005879	utp20	100	98.172	ENSORLG00000008900	utp20	100	98.172	Oryzias_latipes
ENSORLG00020005879	utp20	100	97.044	ENSORLG00015002843	utp20	100	97.044	Oryzias_latipes_hsok
ENSORLG00020005879	utp20	99	87.471	ENSOMEG00000023583	utp20	97	87.611	Oryzias_melastigma
ENSORLG00020005879	utp20	99	54.412	ENSOGAG00000015130	UTP20	94	54.412	Otolemur_garnettii
ENSORLG00020005879	utp20	99	55.485	ENSOARG00000014722	UTP20	94	55.485	Ovis_aries
ENSORLG00020005879	utp20	99	55.274	ENSPPAG00000001381	UTP20	94	55.274	Pan_paniscus
ENSORLG00020005879	utp20	99	54.527	ENSPPRG00000001026	UTP20	95	54.527	Panthera_pardus
ENSORLG00020005879	utp20	99	54.527	ENSPTIG00000020972	UTP20	95	54.527	Panthera_tigris_altaica
ENSORLG00020005879	utp20	99	55.274	ENSPTRG00000005349	UTP20	94	55.274	Pan_troglodytes
ENSORLG00020005879	utp20	99	54.968	ENSPANG00000020388	UTP20	94	54.968	Papio_anubis
ENSORLG00020005879	utp20	100	61.472	ENSPKIG00000007196	utp20	95	61.472	Paramormyrops_kingsleyae
ENSORLG00020005879	utp20	94	53.891	ENSPSIG00000016689	UTP20	94	53.734	Pelodiscus_sinensis
ENSORLG00020005879	utp20	99	70.335	ENSPMGG00000004066	utp20	95	70.133	Periophthalmus_magnuspinnatus
ENSORLG00020005879	utp20	99	56.118	ENSPEMG00000024120	Utp20	94	56.118	Peromyscus_maniculatus_bairdii
ENSORLG00020005879	utp20	99	56.118	ENSPCIG00000009298	UTP20	94	56.118	Phascolarctos_cinereus
ENSORLG00020005879	utp20	92	76.450	ENSPFOG00000003312	utp20	92	77.038	Poecilia_formosa
ENSORLG00020005879	utp20	99	73.887	ENSPLAG00000012874	utp20	99	73.915	Poecilia_latipinna
ENSORLG00020005879	utp20	99	73.338	ENSPMEG00000005915	utp20	99	73.537	Poecilia_mexicana
ENSORLG00020005879	utp20	99	76.047	ENSPREG00000013285	utp20	97	76.002	Poecilia_reticulata
ENSORLG00020005879	utp20	89	55.607	ENSPPYG00000004871	UTP20	95	55.607	Pongo_abelii
ENSORLG00020005879	utp20	80	65.714	ENSPCAG00000012791	UTP20	73	65.714	Procavia_capensis
ENSORLG00020005879	utp20	96	54.737	ENSPCOG00000024948	UTP20	94	55.319	Propithecus_coquereli
ENSORLG00020005879	utp20	99	53.165	ENSPVAG00000008113	UTP20	94	53.165	Pteropus_vampyrus
ENSORLG00020005879	utp20	99	74.681	ENSPNYG00000011561	utp20	94	75.532	Pundamilia_nyererei
ENSORLG00020005879	utp20	100	64.286	ENSPNAG00000006176	utp20	94	64.286	Pygocentrus_nattereri
ENSORLG00020005879	utp20	99	54.430	ENSRNOG00000005823	Utp20	94	54.430	Rattus_norvegicus
ENSORLG00020005879	utp20	99	56.304	ENSRBIG00000025384	UTP20	94	56.304	Rhinopithecus_bieti
ENSORLG00020005879	utp20	99	56.185	ENSRROG00000041254	UTP20	94	55.391	Rhinopithecus_roxellana
ENSORLG00020005879	utp20	99	55.826	ENSSBOG00000035762	UTP20	94	54.219	Saimiri_boliviensis_boliviensis
ENSORLG00020005879	utp20	98	56.304	ENSSHAG00000002298	UTP20	94	56.304	Sarcophilus_harrisii
ENSORLG00020005879	utp20	99	61.987	ENSSFOG00015001674	utp20	97	61.683	Scleropages_formosus
ENSORLG00020005879	utp20	99	74.116	ENSSMAG00000016460	utp20	99	74.218	Scophthalmus_maximus
ENSORLG00020005879	utp20	98	75.899	ENSSDUG00000013730	utp20	94	75.899	Seriola_dumerili
ENSORLG00020005879	utp20	99	75.737	ENSSLDG00000012844	utp20	95	75.715	Seriola_lalandi_dorsalis
ENSORLG00020005879	utp20	99	53.670	ENSSPUG00000004513	UTP20	94	53.670	Sphenodon_punctatus
ENSORLG00020005879	utp20	99	76.271	ENSSPAG00000014674	utp20	95	76.271	Stegastes_partitus
ENSORLG00020005879	utp20	99	54.219	ENSSSCG00000000869	UTP20	94	54.219	Sus_scrofa
ENSORLG00020005879	utp20	78	56.043	ENSTGUG00000009053	-	96	56.281	Taeniopygia_guttata
ENSORLG00020005879	utp20	99	72.524	ENSTRUG00000005849	utp20	95	72.215	Takifugu_rubripes
ENSORLG00020005879	utp20	99	71.279	ENSTNIG00000006921	utp20	95	71.279	Tetraodon_nigroviridis
ENSORLG00020005879	utp20	89	50.583	ENSTBEG00000011917	UTP20	86	50.542	Tupaia_belangeri
ENSORLG00020005879	utp20	97	56.187	ENSTTRG00000017195	UTP20	92	56.187	Tursiops_truncatus
ENSORLG00020005879	utp20	99	54.641	ENSUAMG00000016363	UTP20	94	54.641	Ursus_americanus
ENSORLG00020005879	utp20	99	52.643	ENSUMAG00000000077	UTP20	94	52.643	Ursus_maritimus
ENSORLG00020005879	utp20	87	52.778	ENSVPAG00000011620	UTP20	85	53.283	Vicugna_pacos
ENSORLG00020005879	utp20	99	54.008	ENSVVUG00000018110	UTP20	94	54.008	Vulpes_vulpes
ENSORLG00020005879	utp20	99	55.811	ENSXETG00000032346	UTP20	94	56.160	Xenopus_tropicalis
ENSORLG00020005879	utp20	99	73.245	ENSXMAG00000006503	utp20	99	73.262	Xiphophorus_maculatus