EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020005908 (Gene tree)
Gene ID: -
Gene Symbol: fubp1
Alias: -
Full Name: far upstream element (FUSE) binding protein 1
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 8297 bases
Position: chr17:3072486-3080782
Accession: ZDB-GENE-040426-2159
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020004978	KH_1	PF00013.29	1.3e-68	1	4
ENSORLP00020004978	KH_1	PF00013.29	1.3e-68	2	4
ENSORLP00020004978	KH_1	PF00013.29	1.3e-68	3	4
ENSORLP00020004978	KH_1	PF00013.29	1.3e-68	4	4
ENSORLP00020024426	KH_1	PF00013.29	2.2e-68	1	4
ENSORLP00020024426	KH_1	PF00013.29	2.2e-68	2	4
ENSORLP00020024426	KH_1	PF00013.29	2.2e-68	3	4
ENSORLP00020024426	KH_1	PF00013.29	2.2e-68	4	4
ENSORLP00020005050	KH_1	PF00013.29	2.5e-68	1	4
ENSORLP00020005050	KH_1	PF00013.29	2.5e-68	2	4
ENSORLP00020005050	KH_1	PF00013.29	2.5e-68	3	4
ENSORLP00020005050	KH_1	PF00013.29	2.5e-68	4	4
ENSORLP00020024469	KH_1	PF00013.29	2.6e-68	1	4
ENSORLP00020024469	KH_1	PF00013.29	2.6e-68	2	4
ENSORLP00020024469	KH_1	PF00013.29	2.6e-68	3	4
ENSORLP00020024469	KH_1	PF00013.29	2.6e-68	4	4
ENSORLP00020004978	KH_2	PF07650.17	3.8e-21	1	2
ENSORLP00020004978	KH_2	PF07650.17	3.8e-21	2	2
ENSORLP00020024426	KH_2	PF07650.17	8.7e-21	1	2
ENSORLP00020024426	KH_2	PF07650.17	8.7e-21	2	2
ENSORLP00020005050	KH_2	PF07650.17	1e-20	1	2
ENSORLP00020005050	KH_2	PF07650.17	1e-20	2	2
ENSORLP00020024469	KH_2	PF07650.17	1e-20	1	2
ENSORLP00020024469	KH_2	PF07650.17	1e-20	2	2
ENSORLP00020024426	DUF1897	PF09005.10	1.3e-15	1	2
ENSORLP00020024426	DUF1897	PF09005.10	1.3e-15	2	2
ENSORLP00020005050	DUF1897	PF09005.10	1.5e-15	1	2
ENSORLP00020005050	DUF1897	PF09005.10	1.5e-15	2	2
ENSORLP00020024469	DUF1897	PF09005.10	1.6e-15	1	2
ENSORLP00020024469	DUF1897	PF09005.10	1.6e-15	2	2
ENSORLP00020004978	DUF1897	PF09005.10	7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020006993	-	2045	-	ENSORLP00020024426	665 (aa)	-	-
ENSORLT00020006943	-	3726	-	ENSORLP00020005050	686 (aa)	-	-
ENSORLT00020007060	-	1821	-	ENSORLP00020004978	606 (aa)	-	-
ENSORLT00020006905	-	3794	-	ENSORLP00020024469	690 (aa)	-	-

Gene Model

Click here to download ENSORLG00020005908's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020005908's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020005908	fubp1	57	37.681	ENSORLG00020012671	pcbp3	74	36.842
ENSORLG00020005908	fubp1	63	34.286	ENSORLG00020004573	nova1	70	30.201
ENSORLG00020005908	fubp1	58	37.662	ENSORLG00020003139	zgc:110045	64	31.250
ENSORLG00020005908	fubp1	62	40.580	ENSORLG00020017901	PCBP2	95	40.580
ENSORLG00020005908	fubp1	59	30.488	ENSORLG00020001556	igf2bp2b	64	30.488
ENSORLG00020005908	fubp1	58	30.952	ENSORLG00020003562	igf2bp3	64	31.383
ENSORLG00020005908	fubp1	58	39.394	ENSORLG00020006124	-	77	36.782
ENSORLG00020005908	fubp1	52	37.500	ENSORLG00020001183	-	53	37.209
ENSORLG00020005908	fubp1	97	50.776	ENSORLG00020005284	khsrp	97	51.719
ENSORLG00020005908	fubp1	96	48.829	ENSORLG00020013143	-	94	58.469
ENSORLG00020005908	fubp1	62	39.130	ENSORLG00020016290	pcbp2	93	40.541
ENSORLG00020005908	fubp1	63	34.286	ENSORLG00020019124	-	70	30.872
ENSORLG00020005908	fubp1	97	48.500	ENSORLG00020019624	fubp3	97	48.625

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020005908	fubp1	70	77.042	ENSG00000162613	FUBP1	100	68.047	Homo_sapiens
ENSORLG00020005908	fubp1	99	87.801	ENSAPOG00000014845	fubp1	98	87.801	Acanthochromis_polyacanthus
ENSORLG00020005908	fubp1	70	73.375	ENSAMEG00000007372	FUBP1	100	65.951	Ailuropoda_melanoleuca
ENSORLG00020005908	fubp1	99	83.625	ENSACIG00000020024	fubp1	100	84.043	Amphilophus_citrinellus
ENSORLG00020005908	fubp1	99	91.234	ENSAPEG00000012232	fubp1	99	90.909	Amphiprion_percula
ENSORLG00020005908	fubp1	99	91.694	ENSATEG00000018619	fubp1	100	93.769	Anabas_testudineus
ENSORLG00020005908	fubp1	65	78.692	ENSAPLG00000005965	FUBP1	100	69.243	Anas_platyrhynchos
ENSORLG00020005908	fubp1	99	58.533	ENSACAG00000006310	FUBP1	96	68.017	Anolis_carolinensis
ENSORLG00020005908	fubp1	99	92.525	ENSACLG00000006708	fubp1	100	92.694	Astatotilapia_calliptera
ENSORLG00020005908	fubp1	88	81.801	ENSAMXG00000005525	fubp1	100	83.114	Astyanax_mexicanus
ENSORLG00020005908	fubp1	70	77.263	ENSCJAG00000007062	FUBP1	100	68.444	Callithrix_jacchus
ENSORLG00020005908	fubp1	70	77.093	ENSCAFG00000020361	FUBP1	100	68.195	Canis_familiaris
ENSORLG00020005908	fubp1	66	80.645	ENSTSYG00000000148	FUBP1	100	68.553	Carlito_syrichta
ENSORLG00020005908	fubp1	63	76.408	ENSCAPG00000011052	-	65	83.004	Cavia_aperea
ENSORLG00020005908	fubp1	70	77.313	ENSCPOG00000002757	FUBP1	98	69.118	Cavia_porcellus
ENSORLG00020005908	fubp1	90	64.348	ENSCCAG00000036537	FUBP1	100	64.928	Cebus_capucinus
ENSORLG00020005908	fubp1	70	76.872	ENSCATG00000042126	FUBP1	100	68.047	Cercocebus_atys
ENSORLG00020005908	fubp1	70	77.477	ENSCLAG00000005621	FUBP1	100	69.872	Chinchilla_lanigera
ENSORLG00020005908	fubp1	70	76.872	ENSCSAG00000001402	FUBP1	100	68.047	Chlorocebus_sabaeus
ENSORLG00020005908	fubp1	70	76.872	ENSCHOG00000008177	FUBP1	98	69.424	Choloepus_hoffmanni
ENSORLG00020005908	fubp1	70	78.348	ENSCGRG00001007103	Fubp1	99	69.643	Cricetulus_griseus_chok1gshd
ENSORLG00020005908	fubp1	65	78.502	ENSCGRG00000003372	Fubp1	99	69.388	Cricetulus_griseus_crigri
ENSORLG00020005908	fubp1	99	88.141	ENSCSEG00000021412	fubp1	100	86.295	Cynoglossus_semilaevis
ENSORLG00020005908	fubp1	95	93.598	ENSCVAG00000014487	fubp1	99	93.598	Cyprinodon_variegatus
ENSORLG00020005908	fubp1	99	77.259	ENSDARG00000029248	fubp1	100	82.101	Danio_rerio
ENSORLG00020005908	fubp1	77	54.167	ENSDNOG00000034565	-	87	49.213	Dasypus_novemcinctus
ENSORLG00020005908	fubp1	70	78.300	ENSDORG00000016534	Fubp1	98	68.981	Dipodomys_ordii
ENSORLG00020005908	fubp1	77	77.193	ENSETEG00000000948	-	58	78.947	Echinops_telfairi
ENSORLG00020005908	fubp1	88	45.951	ENSEBUG00000016143	fubp1	58	82.759	Eptatretus_burgeri
ENSORLG00020005908	fubp1	70	81.081	ENSEEUG00000001287	FUBP1	88	67.816	Erinaceus_europaeus
ENSORLG00020005908	fubp1	99	80.377	ENSELUG00000007990	fubp1	100	84.006	Esox_lucius
ENSORLG00020005908	fubp1	70	77.384	ENSFALG00000005768	FUBP1	98	68.694	Ficedula_albicollis
ENSORLG00020005908	fubp1	70	77.093	ENSFDAG00000014210	FUBP1	100	67.808	Fukomys_damarensis
ENSORLG00020005908	fubp1	96	93.313	ENSFHEG00000005230	fubp1	100	93.313	Fundulus_heteroclitus
ENSORLG00020005908	fubp1	99	82.325	ENSGMOG00000003370	fubp1	99	82.325	Gadus_morhua
ENSORLG00020005908	fubp1	70	77.876	ENSGALG00000008939	FUBP1	99	68.945	Gallus_gallus
ENSORLG00020005908	fubp1	96	92.078	ENSGAFG00000020972	fubp1	100	92.078	Gambusia_affinis
ENSORLG00020005908	fubp1	99	86.656	ENSGACG00000016563	fubp1	99	87.284	Gasterosteus_aculeatus
ENSORLG00020005908	fubp1	96	93.303	ENSHBUG00000009835	fubp1	100	92.846	Haplochromis_burtoni
ENSORLG00020005908	fubp1	72	73.203	ENSHGLG00000002808	-	99	63.205	Heterocephalus_glaber_female
ENSORLG00020005908	fubp1	70	77.313	ENSHGLG00000008415	-	100	69.872	Heterocephalus_glaber_female
ENSORLG00020005908	fubp1	70	77.313	ENSHGLG00100003417	-	100	68.336	Heterocephalus_glaber_male
ENSORLG00020005908	fubp1	72	73.856	ENSHGLG00100001414	-	99	63.568	Heterocephalus_glaber_male
ENSORLG00020005908	fubp1	96	90.476	ENSHCOG00000000910	fubp1	100	90.179	Hippocampus_comes
ENSORLG00020005908	fubp1	96	81.476	ENSIPUG00000009896	fubp1	100	82.229	Ictalurus_punctatus
ENSORLG00020005908	fubp1	70	80.137	ENSSTOG00000014312	FUBP1	99	69.391	Ictidomys_tridecemlineatus
ENSORLG00020005908	fubp1	70	78.604	ENSJJAG00000020069	Fubp1	100	68.925	Jaculus_jaculus
ENSORLG00020005908	fubp1	96	93.009	ENSKMAG00000018897	fubp1	100	93.009	Kryptolebias_marmoratus
ENSORLG00020005908	fubp1	98	89.550	ENSLBEG00000012700	fubp1	99	90.276	Labrus_bergylta
ENSORLG00020005908	fubp1	94	77.943	ENSLOCG00000003745	fubp1	99	78.038	Lepisosteus_oculatus
ENSORLG00020005908	fubp1	70	73.996	ENSLAFG00000003273	FUBP1	99	69.363	Loxodonta_africana
ENSORLG00020005908	fubp1	70	77.042	ENSMFAG00000031825	FUBP1	100	68.296	Macaca_fascicularis
ENSORLG00020005908	fubp1	70	79.909	ENSMMUG00000002899	FUBP1	100	68.047	Macaca_mulatta
ENSORLG00020005908	fubp1	70	76.872	ENSMNEG00000045212	FUBP1	99	69.130	Macaca_nemestrina
ENSORLG00020005908	fubp1	95	92.054	ENSMAMG00000007489	fubp1	99	91.604	Mastacembelus_armatus
ENSORLG00020005908	fubp1	96	93.151	ENSMZEG00005024298	fubp1	100	92.694	Maylandia_zebra
ENSORLG00020005908	fubp1	65	78.744	ENSMGAG00000009424	FUBP1	99	68.819	Meleagris_gallopavo
ENSORLG00020005908	fubp1	70	77.313	ENSMAUG00000016428	Fubp1	98	68.824	Mesocricetus_auratus
ENSORLG00020005908	fubp1	70	80.137	ENSMOCG00000014751	Fubp1	99	69.415	Microtus_ochrogaster
ENSORLG00020005908	fubp1	87	87.409	ENSMMOG00000019463	fubp1	99	89.444	Mola_mola
ENSORLG00020005908	fubp1	68	70.562	ENSMODG00000020804	FUBP1	100	64.812	Monodelphis_domestica
ENSORLG00020005908	fubp1	96	93.313	ENSMALG00000015173	fubp1	100	93.313	Monopterus_albus
ENSORLG00020005908	fubp1	70	77.728	MGP_CAROLIEiJ_G0025740	Fubp1	99	75.096	Mus_caroli
ENSORLG00020005908	fubp1	70	77.506	ENSMUSG00000028034	Fubp1	99	74.904	Mus_musculus
ENSORLG00020005908	fubp1	70	77.556	MGP_PahariEiJ_G0027191	Fubp1	99	74.952	Mus_pahari
ENSORLG00020005908	fubp1	70	77.728	MGP_SPRETEiJ_G0026693	Fubp1	99	75.096	Mus_spretus
ENSORLG00020005908	fubp1	70	73.222	ENSMLUG00000014802	FUBP1	99	66.381	Myotis_lucifugus
ENSORLG00020005908	fubp1	70	74.165	ENSNGAG00000014302	Fubp1	98	67.808	Nannospalax_galili
ENSORLG00020005908	fubp1	99	92.691	ENSNBRG00000015099	fubp1	99	92.691	Neolamprologus_brichardi
ENSORLG00020005908	fubp1	70	72.807	ENSNLEG00000009772	FUBP1	100	66.814	Nomascus_leucogenys
ENSORLG00020005908	fubp1	77	82.353	ENSMEUG00000007917	-	77	71.795	Notamacropus_eugenii
ENSORLG00020005908	fubp1	88	69.565	ENSOPRG00000001175	FUBP1	91	69.855	Ochotona_princeps
ENSORLG00020005908	fubp1	70	77.313	ENSODEG00000002600	-	100	67.808	Octodon_degus
ENSORLG00020005908	fubp1	99	53.312	ENSODEG00000003657	-	99	50.455	Octodon_degus
ENSORLG00020005908	fubp1	95	93.282	ENSONIG00000018381	fubp1	97	92.824	Oreochromis_niloticus
ENSORLG00020005908	fubp1	57	79.948	ENSOANG00000009777	FUBP1	99	69.431	Ornithorhynchus_anatinus
ENSORLG00020005908	fubp1	100	97.398	ENSORLG00000003540	fubp1	100	97.398	Oryzias_latipes
ENSORLG00020005908	fubp1	100	99.711	ENSORLG00015008779	fubp1	100	99.849	Oryzias_latipes_hsok
ENSORLG00020005908	fubp1	98	99.254	ENSOMEG00000021943	fubp1	99	99.254	Oryzias_melastigma
ENSORLG00020005908	fubp1	70	73.069	ENSOGAG00000014233	FUBP1	99	66.476	Otolemur_garnettii
ENSORLG00020005908	fubp1	70	77.263	ENSOARG00000013259	FUBP1	100	71.259	Ovis_aries
ENSORLG00020005908	fubp1	70	77.093	ENSPPRG00000000413	FUBP1	100	68.195	Panthera_pardus
ENSORLG00020005908	fubp1	70	77.093	ENSPTIG00000019450	FUBP1	100	68.195	Panthera_tigris_altaica
ENSORLG00020005908	fubp1	67	77.619	ENSPSIG00000012965	FUBP1	99	68.387	Pelodiscus_sinensis
ENSORLG00020005908	fubp1	99	82.958	ENSPMGG00000009060	fubp1	99	79.969	Periophthalmus_magnuspinnatus
ENSORLG00020005908	fubp1	70	77.728	ENSPEMG00000021802	Fubp1	100	67.808	Peromyscus_maniculatus_bairdii
ENSORLG00020005908	fubp1	63	57.205	ENSPMAG00000001644	-	93	60.262	Petromyzon_marinus
ENSORLG00020005908	fubp1	96	94.073	ENSPFOG00000000238	fubp1	100	94.073	Poecilia_formosa
ENSORLG00020005908	fubp1	99	89.902	ENSPLAG00000021170	fubp1	100	91.337	Poecilia_latipinna
ENSORLG00020005908	fubp1	99	88.331	ENSPMEG00000004747	fubp1	99	95.318	Poecilia_mexicana
ENSORLG00020005908	fubp1	96	93.921	ENSPREG00000017911	fubp1	100	93.921	Poecilia_reticulata
ENSORLG00020005908	fubp1	73	76.509	ENSPPYG00000001219	-	70	77.706	Pongo_abelii
ENSORLG00020005908	fubp1	70	77.042	ENSPCAG00000012617	FUBP1	98	69.481	Procavia_capensis
ENSORLG00020005908	fubp1	70	78.251	ENSPCOG00000024974	FUBP1	100	68.195	Propithecus_coquereli
ENSORLG00020005908	fubp1	70	71.145	ENSPVAG00000014637	FUBP1	98	64.993	Pteropus_vampyrus
ENSORLG00020005908	fubp1	96	93.151	ENSPNYG00000004552	fubp1	100	92.694	Pundamilia_nyererei
ENSORLG00020005908	fubp1	96	83.483	ENSPNAG00000016207	fubp1	100	83.934	Pygocentrus_nattereri
ENSORLG00020005908	fubp1	70	77.728	ENSRNOG00000043370	Fubp1	99	70.089	Rattus_norvegicus
ENSORLG00020005908	fubp1	70	76.872	ENSRBIG00000042950	FUBP1	100	68.047	Rhinopithecus_bieti
ENSORLG00020005908	fubp1	70	76.872	ENSRROG00000043534	FUBP1	100	68.047	Rhinopithecus_roxellana
ENSORLG00020005908	fubp1	70	77.093	ENSSBOG00000027299	FUBP1	100	68.195	Saimiri_boliviensis_boliviensis
ENSORLG00020005908	fubp1	66	77.033	ENSSHAG00000005367	FUBP1	99	69.043	Sarcophilus_harrisii
ENSORLG00020005908	fubp1	99	78.846	ENSSFOG00015010213	fubp1	99	82.165	Scleropages_formosus
ENSORLG00020005908	fubp1	97	88.071	ENSSMAG00000012029	fubp1	99	88.660	Scophthalmus_maximus
ENSORLG00020005908	fubp1	97	91.176	ENSSDUG00000007383	fubp1	99	91.471	Seriola_dumerili
ENSORLG00020005908	fubp1	99	89.593	ENSSLDG00000022863	fubp1	99	91.471	Seriola_lalandi_dorsalis
ENSORLG00020005908	fubp1	70	86.207	ENSSARG00000011730	FUBP1	85	72.401	Sorex_araneus
ENSORLG00020005908	fubp1	95	67.109	ENSSPUG00000008389	FUBP1	100	68.012	Sphenodon_punctatus
ENSORLG00020005908	fubp1	99	91.276	ENSSPAG00000010161	fubp1	100	93.769	Stegastes_partitus
ENSORLG00020005908	fubp1	65	77.804	ENSTGUG00000006841	FUBP1	100	68.125	Taeniopygia_guttata
ENSORLG00020005908	fubp1	97	86.530	ENSTRUG00000004615	fubp1	100	87.001	Takifugu_rubripes
ENSORLG00020005908	fubp1	77	79.762	ENSTBEG00000017333	FUBP1	62	85.714	Tupaia_belangeri
ENSORLG00020005908	fubp1	70	77.093	ENSTTRG00000000096	FUBP1	98	69.276	Tursiops_truncatus
ENSORLG00020005908	fubp1	70	77.093	ENSVPAG00000004709	FUBP1	99	68.833	Vicugna_pacos
ENSORLG00020005908	fubp1	99	82.986	ENSXCOG00000019354	fubp1	100	81.942	Xiphophorus_couchianus
ENSORLG00020005908	fubp1	96	88.364	ENSXMAG00000007168	fubp1	99	94.983	Xiphophorus_maculatus