EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020005940 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-19e4.5
Alias: -
Full Name: probable peptidyl-tRNA hydrolase 2
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 5427 bases
Position: chr5:19152023-19157449
Accession: 101156005
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020005140	PTH2	PF01981.16	5.3e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020006796	-	3852	-	ENSORLP00020005140	184 (aa)	XP_004068955	UPI0002A4B202

Gene Model

Click here to download ENSORLG00020005940's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020005940's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020005940	si:dkey-19e4.5	66	46.721	ENSORLG00020015390	ptrh2	56	46.721

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020005940	si:dkey-19e4.5	100	85.870	ENSAPOG00000018297	si:dkey-19e4.5	100	85.870	Acanthochromis_polyacanthus
ENSORLG00020005940	si:dkey-19e4.5	94	87.861	ENSACIG00000001450	si:dkey-19e4.5	98	87.861	Amphilophus_citrinellus
ENSORLG00020005940	si:dkey-19e4.5	100	86.413	ENSAOCG00000000622	si:dkey-19e4.5	100	86.413	Amphiprion_ocellaris
ENSORLG00020005940	si:dkey-19e4.5	100	86.413	ENSAPEG00000017071	si:dkey-19e4.5	100	86.413	Amphiprion_percula
ENSORLG00020005940	si:dkey-19e4.5	100	80.435	ENSATEG00000003450	si:dkey-19e4.5	100	80.435	Anabas_testudineus
ENSORLG00020005940	si:dkey-19e4.5	62	71.053	ENSACAG00000028513	-	99	71.053	Anolis_carolinensis
ENSORLG00020005940	si:dkey-19e4.5	100	85.870	ENSACLG00000026360	si:dkey-19e4.5	100	85.870	Astatotilapia_calliptera
ENSORLG00020005940	si:dkey-19e4.5	100	80.435	ENSAMXG00000016302	si:dkey-19e4.5	100	80.435	Astyanax_mexicanus
ENSORLG00020005940	si:dkey-19e4.5	93	37.500	WBGene00016062	C24G6.8	60	35.938	Caenorhabditis_elegans
ENSORLG00020005940	si:dkey-19e4.5	100	86.413	ENSCVAG00000018623	si:dkey-19e4.5	100	86.413	Cyprinodon_variegatus
ENSORLG00020005940	si:dkey-19e4.5	92	84.706	ENSDARG00000089886	si:dkey-19e4.5	97	84.706	Danio_rerio
ENSORLG00020005940	si:dkey-19e4.5	100	81.283	ENSELUG00000012877	si:dkey-19e4.5	100	81.283	Esox_lucius
ENSORLG00020005940	si:dkey-19e4.5	100	83.152	ENSFHEG00000017879	si:dkey-19e4.5	98	85.294	Fundulus_heteroclitus
ENSORLG00020005940	si:dkey-19e4.5	73	85.821	ENSGMOG00000018615	si:dkey-19e4.5	100	85.821	Gadus_morhua
ENSORLG00020005940	si:dkey-19e4.5	100	83.696	ENSGAFG00000008238	si:dkey-19e4.5	95	83.696	Gambusia_affinis
ENSORLG00020005940	si:dkey-19e4.5	73	85.821	ENSGACG00000011371	si:dkey-19e4.5	100	85.821	Gasterosteus_aculeatus
ENSORLG00020005940	si:dkey-19e4.5	100	85.870	ENSHBUG00000003898	si:dkey-19e4.5	100	85.870	Haplochromis_burtoni
ENSORLG00020005940	si:dkey-19e4.5	100	78.919	ENSHCOG00000011175	si:dkey-19e4.5	100	78.919	Hippocampus_comes
ENSORLG00020005940	si:dkey-19e4.5	100	78.804	ENSIPUG00000023250	si:dkey-19e4.5	97	82.353	Ictalurus_punctatus
ENSORLG00020005940	si:dkey-19e4.5	100	80.978	ENSKMAG00000018142	si:dkey-19e4.5	100	80.978	Kryptolebias_marmoratus
ENSORLG00020005940	si:dkey-19e4.5	100	84.783	ENSLBEG00000028494	si:dkey-19e4.5	100	84.783	Labrus_bergylta
ENSORLG00020005940	si:dkey-19e4.5	99	63.934	ENSLACG00000003702	si:dkey-19e4.5	99	63.934	Latimeria_chalumnae
ENSORLG00020005940	si:dkey-19e4.5	100	80.435	ENSLOCG00000013652	si:dkey-19e4.5	100	80.435	Lepisosteus_oculatus
ENSORLG00020005940	si:dkey-19e4.5	100	82.609	ENSMAMG00000023661	si:dkey-19e4.5	100	82.609	Mastacembelus_armatus
ENSORLG00020005940	si:dkey-19e4.5	100	85.870	ENSMZEG00005006058	si:dkey-19e4.5	100	85.870	Maylandia_zebra
ENSORLG00020005940	si:dkey-19e4.5	100	82.609	ENSMMOG00000009678	si:dkey-19e4.5	100	82.609	Mola_mola
ENSORLG00020005940	si:dkey-19e4.5	92	84.706	ENSMALG00000021083	si:dkey-19e4.5	97	84.706	Monopterus_albus
ENSORLG00020005940	si:dkey-19e4.5	57	88.571	ENSNBRG00000018523	si:dkey-19e4.5	52	88.571	Neolamprologus_brichardi
ENSORLG00020005940	si:dkey-19e4.5	100	100.000	ENSORLG00000010093	si:dkey-19e4.5	100	100.000	Oryzias_latipes
ENSORLG00020005940	si:dkey-19e4.5	100	98.913	ENSORLG00015002105	si:dkey-19e4.5	100	98.913	Oryzias_latipes_hsok
ENSORLG00020005940	si:dkey-19e4.5	100	97.826	ENSOMEG00000001615	si:dkey-19e4.5	100	97.826	Oryzias_melastigma
ENSORLG00020005940	si:dkey-19e4.5	100	73.913	ENSPKIG00000016249	-	100	73.913	Paramormyrops_kingsleyae
ENSORLG00020005940	si:dkey-19e4.5	100	79.891	ENSPKIG00000018613	-	100	79.891	Paramormyrops_kingsleyae
ENSORLG00020005940	si:dkey-19e4.5	100	83.243	ENSPFOG00000011934	si:dkey-19e4.5	100	83.784	Poecilia_formosa
ENSORLG00020005940	si:dkey-19e4.5	100	82.609	ENSPLAG00000012878	si:dkey-19e4.5	100	82.609	Poecilia_latipinna
ENSORLG00020005940	si:dkey-19e4.5	100	83.243	ENSPMEG00000015916	si:dkey-19e4.5	100	83.784	Poecilia_mexicana
ENSORLG00020005940	si:dkey-19e4.5	100	82.609	ENSPREG00000021009	si:dkey-19e4.5	100	82.609	Poecilia_reticulata
ENSORLG00020005940	si:dkey-19e4.5	100	85.870	ENSPNYG00000007117	si:dkey-19e4.5	100	85.870	Pundamilia_nyererei
ENSORLG00020005940	si:dkey-19e4.5	100	80.978	ENSPNAG00000009107	si:dkey-19e4.5	98	83.333	Pygocentrus_nattereri
ENSORLG00020005940	si:dkey-19e4.5	100	81.522	ENSSFOG00015018940	-	85	81.522	Scleropages_formosus
ENSORLG00020005940	si:dkey-19e4.5	100	76.630	ENSSFOG00015015536	-	100	76.630	Scleropages_formosus
ENSORLG00020005940	si:dkey-19e4.5	100	85.326	ENSSMAG00000004082	si:dkey-19e4.5	100	85.326	Scophthalmus_maximus
ENSORLG00020005940	si:dkey-19e4.5	100	84.783	ENSSDUG00000008513	si:dkey-19e4.5	100	84.783	Seriola_dumerili
ENSORLG00020005940	si:dkey-19e4.5	92	74.118	ENSSLDG00000017403	si:dkey-19e4.5	96	74.118	Seriola_lalandi_dorsalis
ENSORLG00020005940	si:dkey-19e4.5	69	70.079	ENSSPUG00000009492	-	82	70.079	Sphenodon_punctatus
ENSORLG00020005940	si:dkey-19e4.5	100	86.957	ENSSPAG00000008798	si:dkey-19e4.5	100	86.957	Stegastes_partitus
ENSORLG00020005940	si:dkey-19e4.5	100	82.609	ENSTRUG00000020025	si:dkey-19e4.5	100	82.609	Takifugu_rubripes
ENSORLG00020005940	si:dkey-19e4.5	100	84.239	ENSXCOG00000002547	si:dkey-19e4.5	100	84.239	Xiphophorus_couchianus
ENSORLG00020005940	si:dkey-19e4.5	100	84.239	ENSXMAG00000025389	si:dkey-19e4.5	100	84.239	Xiphophorus_maculatus