EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020005972 (Gene tree)
Gene ID: -
Gene Symbol: trmt13
Alias: -
Full Name: tRNA methyltransferase 13 homolog
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 16070 bases
Position: chr4:5732793-5748862
Accession: ZDB-GENE-050327-19
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020024527	TRM13	PF05206.14	6.3e-84	1	1
ENSORLP00020024510	TRM13	PF05206.14	7.7e-84	1	1
ENSORLP00020024527	zf-TRM13_CCCH	PF11722.8	9.9e-13	1	1
ENSORLP00020024510	zf-TRM13_CCCH	PF11722.8	1.1e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020006757	-	1320	-	ENSORLP00020024527	439 (aa)	-	-
ENSORLT00020006780	-	1389	-	ENSORLP00020024510	462 (aa)	-	-

Gene Model

Click here to download ENSORLG00020005972's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020005972's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020005972	trmt13	97	48.637	ENSG00000122435	TRMT13	95	48.394	Homo_sapiens
ENSORLG00020005972	trmt13	97	61.077	ENSAPOG00000015131	trmt13	99	62.112	Acanthochromis_polyacanthus
ENSORLG00020005972	trmt13	97	50.000	ENSAMEG00000008917	TRMT13	95	48.380	Ailuropoda_melanoleuca
ENSORLG00020005972	trmt13	98	66.886	ENSACIG00000005804	trmt13	96	65.502	Amphilophus_citrinellus
ENSORLG00020005972	trmt13	97	61.570	ENSAOCG00000023585	trmt13	99	61.570	Amphiprion_ocellaris
ENSORLG00020005972	trmt13	97	61.570	ENSAPEG00000004025	trmt13	99	61.570	Amphiprion_percula
ENSORLG00020005972	trmt13	98	65.721	ENSATEG00000006597	trmt13	97	65.721	Anabas_testudineus
ENSORLG00020005972	trmt13	87	49.642	ENSAPLG00000014924	TRMT13	95	49.392	Anas_platyrhynchos
ENSORLG00020005972	trmt13	97	49.565	ENSACAG00000003498	TRMT13	97	49.784	Anolis_carolinensis
ENSORLG00020005972	trmt13	97	49.057	ENSANAG00000019525	TRMT13	95	48.822	Aotus_nancymaae
ENSORLG00020005972	trmt13	97	66.444	ENSACLG00000020018	trmt13	98	66.444	Astatotilapia_calliptera
ENSORLG00020005972	trmt13	97	50.855	ENSAMXG00000017963	trmt13	98	51.702	Astyanax_mexicanus
ENSORLG00020005972	trmt13	97	49.476	ENSBTAG00000015781	TRMT13	95	49.251	Bos_taurus
ENSORLG00020005972	trmt13	97	49.156	ENSCJAG00000000200	TRMT13	89	59.124	Callithrix_jacchus
ENSORLG00020005972	trmt13	67	49.355	ENSCAFG00000020021	TRMT13	96	49.359	Canis_familiaris
ENSORLG00020005972	trmt13	55	51.504	ENSCAFG00020011572	TRMT13	90	51.504	Canis_lupus_dingo
ENSORLG00020005972	trmt13	98	48.852	ENSCHIG00000015395	TRMT13	96	48.827	Capra_hircus
ENSORLG00020005972	trmt13	98	47.951	ENSTSYG00000010811	TRMT13	98	50.495	Carlito_syrichta
ENSORLG00020005972	trmt13	73	37.615	ENSCAPG00000009085	TRMT13	91	39.144	Cavia_aperea
ENSORLG00020005972	trmt13	98	48.945	ENSCPOG00000000694	TRMT13	97	48.734	Cavia_porcellus
ENSORLG00020005972	trmt13	97	49.266	ENSCCAG00000023772	TRMT13	95	49.036	Cebus_capucinus
ENSORLG00020005972	trmt13	98	48.643	ENSCATG00000033556	TRMT13	97	48.434	Cercocebus_atys
ENSORLG00020005972	trmt13	88	49.639	ENSCLAG00000008220	TRMT13	95	49.136	Chinchilla_lanigera
ENSORLG00020005972	trmt13	97	49.057	ENSCSAG00000001506	TRMT13	95	48.060	Chlorocebus_sabaeus
ENSORLG00020005972	trmt13	98	49.578	ENSCPBG00000026671	TRMT13	97	49.578	Chrysemys_picta_bellii
ENSORLG00020005972	trmt13	97	48.637	ENSCANG00000034659	TRMT13	95	48.394	Colobus_angolensis_palliatus
ENSORLG00020005972	trmt13	97	46.004	ENSCGRG00001021601	Trmt13	95	46.809	Cricetulus_griseus_chok1gshd
ENSORLG00020005972	trmt13	53	45.344	ENSCGRG00000000093	-	96	46.185	Cricetulus_griseus_crigri
ENSORLG00020005972	trmt13	98	63.596	ENSCSEG00000000591	trmt13	98	63.596	Cynoglossus_semilaevis
ENSORLG00020005972	trmt13	98	65.806	ENSCVAG00000017342	trmt13	94	65.806	Cyprinodon_variegatus
ENSORLG00020005972	trmt13	97	54.386	ENSDARG00000102846	trmt13	96	54.386	Danio_rerio
ENSORLG00020005972	trmt13	55	50.368	ENSDNOG00000001710	TRMT13	80	50.368	Dasypus_novemcinctus
ENSORLG00020005972	trmt13	97	46.537	ENSDORG00000015808	Trmt13	95	46.567	Dipodomys_ordii
ENSORLG00020005972	trmt13	97	34.194	FBgn0037435	CG18048	94	34.194	Drosophila_melanogaster
ENSORLG00020005972	trmt13	97	43.683	ENSETEG00000005819	TRMT13	96	42.766	Echinops_telfairi
ENSORLG00020005972	trmt13	96	42.950	ENSEBUG00000014444	trmt13	96	43.601	Eptatretus_burgeri
ENSORLG00020005972	trmt13	97	48.441	ENSEASG00005015918	TRMT13	95	48.408	Equus_asinus_asinus
ENSORLG00020005972	trmt13	97	48.233	ENSECAG00000022626	TRMT13	95	48.195	Equus_caballus
ENSORLG00020005972	trmt13	73	55.769	ENSEEUG00000000294	TRMT13	72	55.769	Erinaceus_europaeus
ENSORLG00020005972	trmt13	97	52.034	ENSELUG00000003803	trmt13	98	52.155	Esox_lucius
ENSORLG00020005972	trmt13	97	48.211	ENSFCAG00000030618	TRMT13	95	47.957	Felis_catus
ENSORLG00020005972	trmt13	97	50.429	ENSFALG00000002424	TRMT13	95	50.655	Ficedula_albicollis
ENSORLG00020005972	trmt13	98	47.009	ENSFDAG00000006342	TRMT13	96	47.660	Fukomys_damarensis
ENSORLG00020005972	trmt13	82	65.903	ENSFHEG00000022954	trmt13	99	65.441	Fundulus_heteroclitus
ENSORLG00020005972	trmt13	96	52.448	ENSGMOG00000013223	trmt13	99	52.448	Gadus_morhua
ENSORLG00020005972	trmt13	96	50.000	ENSGALG00000005290	TRMT13	96	50.435	Gallus_gallus
ENSORLG00020005972	trmt13	80	61.478	ENSGAFG00000001577	trmt13	84	61.478	Gambusia_affinis
ENSORLG00020005972	trmt13	98	66.222	ENSGACG00000013428	trmt13	98	66.444	Gasterosteus_aculeatus
ENSORLG00020005972	trmt13	98	49.367	ENSGAGG00000023303	TRMT13	96	52.222	Gopherus_agassizii
ENSORLG00020005972	trmt13	97	48.428	ENSGGOG00000005616	TRMT13	95	48.180	Gorilla_gorilla
ENSORLG00020005972	trmt13	97	66.741	ENSHBUG00000007754	trmt13	98	66.741	Haplochromis_burtoni
ENSORLG00020005972	trmt13	98	46.895	ENSHGLG00000002164	TRMT13	96	47.234	Heterocephalus_glaber_female
ENSORLG00020005972	trmt13	98	46.895	ENSHGLG00100001618	TRMT13	96	47.234	Heterocephalus_glaber_male
ENSORLG00020005972	trmt13	97	55.432	ENSHCOG00000020553	trmt13	98	55.432	Hippocampus_comes
ENSORLG00020005972	trmt13	97	52.402	ENSIPUG00000024787	trmt13	98	53.846	Ictalurus_punctatus
ENSORLG00020005972	trmt13	97	47.479	ENSSTOG00000013483	TRMT13	95	47.425	Ictidomys_tridecemlineatus
ENSORLG00020005972	trmt13	97	47.890	ENSJJAG00000018012	Trmt13	96	46.868	Jaculus_jaculus
ENSORLG00020005972	trmt13	67	69.048	ENSKMAG00000007639	trmt13	92	69.257	Kryptolebias_marmoratus
ENSORLG00020005972	trmt13	97	64.410	ENSLBEG00000020238	trmt13	99	65.066	Labrus_bergylta
ENSORLG00020005972	trmt13	97	49.460	ENSLACG00000013153	TRMT13	99	47.901	Latimeria_chalumnae
ENSORLG00020005972	trmt13	97	51.641	ENSLOCG00000000418	trmt13	97	51.641	Lepisosteus_oculatus
ENSORLG00020005972	trmt13	77	50.811	ENSLAFG00000002383	TRMT13	92	50.716	Loxodonta_africana
ENSORLG00020005972	trmt13	97	48.529	ENSMFAG00000034681	TRMT13	97	48.319	Macaca_fascicularis
ENSORLG00020005972	trmt13	97	48.529	ENSMMUG00000004243	TRMT13	97	48.319	Macaca_mulatta
ENSORLG00020005972	trmt13	97	48.529	ENSMNEG00000036102	TRMT13	97	48.319	Macaca_nemestrina
ENSORLG00020005972	trmt13	98	48.643	ENSMLEG00000034258	TRMT13	97	48.434	Mandrillus_leucophaeus
ENSORLG00020005972	trmt13	99	66.157	ENSMAMG00000016597	trmt13	97	66.157	Mastacembelus_armatus
ENSORLG00020005972	trmt13	97	66.222	ENSMZEG00005020959	trmt13	98	66.222	Maylandia_zebra
ENSORLG00020005972	trmt13	87	50.605	ENSMGAG00000006970	TRMT13	95	50.611	Meleagris_gallopavo
ENSORLG00020005972	trmt13	97	47.257	ENSMAUG00000010448	Trmt13	95	47.122	Mesocricetus_auratus
ENSORLG00020005972	trmt13	97	49.580	ENSMICG00000005283	TRMT13	95	49.356	Microcebus_murinus
ENSORLG00020005972	trmt13	97	47.414	ENSMOCG00000019914	Trmt13	96	47.771	Microtus_ochrogaster
ENSORLG00020005972	trmt13	56	63.386	ENSMMOG00000007762	trmt13	90	63.386	Mola_mola
ENSORLG00020005972	trmt13	98	47.412	ENSMODG00000003646	TRMT13	95	47.222	Monodelphis_domestica
ENSORLG00020005972	trmt13	97	66.438	ENSMALG00000020965	trmt13	96	66.438	Monopterus_albus
ENSORLG00020005972	trmt13	97	48.211	MGP_CAROLIEiJ_G0025568	Trmt13	96	50.000	Mus_caroli
ENSORLG00020005972	trmt13	97	48.414	ENSMUSG00000033439	Trmt13	96	50.000	Mus_musculus
ENSORLG00020005972	trmt13	98	46.996	MGP_PahariEiJ_G0027014	Trmt13	96	47.753	Mus_pahari
ENSORLG00020005972	trmt13	97	48.734	MGP_SPRETEiJ_G0026518	Trmt13	96	50.000	Mus_spretus
ENSORLG00020005972	trmt13	77	51.944	ENSMPUG00000002078	-	89	51.622	Mustela_putorius_furo
ENSORLG00020005972	trmt13	97	48.268	ENSMLUG00000002124	TRMT13	95	49.032	Myotis_lucifugus
ENSORLG00020005972	trmt13	96	63.265	ENSNBRG00000006783	trmt13	95	63.265	Neolamprologus_brichardi
ENSORLG00020005972	trmt13	97	48.428	ENSNLEG00000035917	TRMT13	95	48.180	Nomascus_leucogenys
ENSORLG00020005972	trmt13	65	57.447	ENSOPRG00000012048	TRMT13	62	56.410	Ochotona_princeps
ENSORLG00020005972	trmt13	97	66.962	ENSONIG00000004574	trmt13	98	66.962	Oreochromis_niloticus
ENSORLG00020005972	trmt13	87	50.237	ENSOANG00000012057	TRMT13	96	48.956	Ornithorhynchus_anatinus
ENSORLG00020005972	trmt13	97	48.312	ENSOCUG00000023095	TRMT13	95	47.312	Oryctolagus_cuniculus
ENSORLG00020005972	trmt13	97	97.345	ENSORLG00000003320	trmt13	99	97.345	Oryzias_latipes
ENSORLG00020005972	trmt13	98	90.265	ENSORLG00015002270	trmt13	98	90.265	Oryzias_latipes_hsok
ENSORLG00020005972	trmt13	98	81.637	ENSOMEG00000006724	trmt13	94	81.858	Oryzias_melastigma
ENSORLG00020005972	trmt13	97	48.283	ENSOGAG00000005618	TRMT13	93	48.614	Otolemur_garnettii
ENSORLG00020005972	trmt13	98	48.852	ENSOARG00000017983	TRMT13	96	48.827	Ovis_aries
ENSORLG00020005972	trmt13	97	49.266	ENSPPAG00000043736	TRMT13	95	49.036	Pan_paniscus
ENSORLG00020005972	trmt13	97	48.211	ENSPPRG00000003424	TRMT13	95	47.957	Panthera_pardus
ENSORLG00020005972	trmt13	97	48.211	ENSPTIG00000018598	TRMT13	95	47.957	Panthera_tigris_altaica
ENSORLG00020005972	trmt13	98	48.504	ENSPTRG00000001001	TRMT13	97	49.057	Pan_troglodytes
ENSORLG00020005972	trmt13	97	48.637	ENSPANG00000007598	TRMT13	97	48.428	Papio_anubis
ENSORLG00020005972	trmt13	97	53.422	ENSPKIG00000001514	trmt13	98	53.084	Paramormyrops_kingsleyae
ENSORLG00020005972	trmt13	88	46.445	ENSPSIG00000012703	TRMT13	99	46.445	Pelodiscus_sinensis
ENSORLG00020005972	trmt13	98	61.021	ENSPMGG00000013298	trmt13	93	61.021	Periophthalmus_magnuspinnatus
ENSORLG00020005972	trmt13	97	46.753	ENSPEMG00000000275	Trmt13	95	47.323	Peromyscus_maniculatus_bairdii
ENSORLG00020005972	trmt13	97	44.699	ENSPMAG00000000823	trmt13	98	44.699	Petromyzon_marinus
ENSORLG00020005972	trmt13	99	48.255	ENSPCIG00000007699	TRMT13	98	47.890	Phascolarctos_cinereus
ENSORLG00020005972	trmt13	97	61.211	ENSPFOG00000008675	trmt13	95	60.265	Poecilia_formosa
ENSORLG00020005972	trmt13	97	61.538	ENSPLAG00000009709	trmt13	99	61.538	Poecilia_latipinna
ENSORLG00020005972	trmt13	97	61.319	ENSPMEG00000022954	trmt13	99	61.319	Poecilia_mexicana
ENSORLG00020005972	trmt13	81	62.467	ENSPREG00000005645	trmt13	94	63.469	Poecilia_reticulata
ENSORLG00020005972	trmt13	97	48.414	ENSPPYG00000001120	TRMT13	94	48.380	Pongo_abelii
ENSORLG00020005972	trmt13	97	48.211	ENSPCAG00000002340	TRMT13	95	47.722	Procavia_capensis
ENSORLG00020005972	trmt13	97	48.950	ENSPCOG00000017984	TRMT13	95	48.712	Propithecus_coquereli
ENSORLG00020005972	trmt13	98	47.908	ENSPVAG00000017430	TRMT13	97	47.699	Pteropus_vampyrus
ENSORLG00020005972	trmt13	97	65.217	ENSPNYG00000013690	trmt13	98	65.217	Pundamilia_nyererei
ENSORLG00020005972	trmt13	97	53.463	ENSPNAG00000022130	trmt13	98	54.013	Pygocentrus_nattereri
ENSORLG00020005972	trmt13	97	47.505	ENSRNOG00000015140	Trmt13	92	47.957	Rattus_norvegicus
ENSORLG00020005972	trmt13	97	48.637	ENSRBIG00000037686	TRMT13	95	48.394	Rhinopithecus_bieti
ENSORLG00020005972	trmt13	97	48.945	ENSRROG00000044057	TRMT13	97	48.312	Rhinopithecus_roxellana
ENSORLG00020005972	trmt13	97	49.266	ENSSBOG00000026541	TRMT13	95	49.036	Saimiri_boliviensis_boliviensis
ENSORLG00020005972	trmt13	88	48.951	ENSSHAG00000005213	TRMT13	90	49.153	Sarcophilus_harrisii
ENSORLG00020005972	trmt13	97	54.425	ENSSFOG00015017560	trmt13	97	54.425	Scleropages_formosus
ENSORLG00020005972	trmt13	98	64.783	ENSSMAG00000014592	trmt13	96	64.783	Scophthalmus_maximus
ENSORLG00020005972	trmt13	98	66.738	ENSSDUG00000015508	trmt13	95	66.738	Seriola_dumerili
ENSORLG00020005972	trmt13	98	66.738	ENSSLDG00000019060	trmt13	96	66.738	Seriola_lalandi_dorsalis
ENSORLG00020005972	trmt13	96	42.048	ENSSARG00000010344	TRMT13	96	42.299	Sorex_araneus
ENSORLG00020005972	trmt13	96	49.333	ENSSPUG00000016339	TRMT13	98	49.669	Sphenodon_punctatus
ENSORLG00020005972	trmt13	97	66.593	ENSSPAG00000011922	trmt13	99	66.228	Stegastes_partitus
ENSORLG00020005972	trmt13	98	50.316	ENSSSCG00000006869	TRMT13	95	50.000	Sus_scrofa
ENSORLG00020005972	trmt13	97	50.655	ENSTGUG00000005253	TRMT13	98	50.652	Taeniopygia_guttata
ENSORLG00020005972	trmt13	98	60.173	ENSTRUG00000008400	trmt13	99	59.871	Takifugu_rubripes
ENSORLG00020005972	trmt13	67	51.282	ENSTBEG00000008911	TRMT13	75	50.685	Tupaia_belangeri
ENSORLG00020005972	trmt13	97	49.666	ENSUAMG00000017251	TRMT13	95	49.666	Ursus_americanus
ENSORLG00020005972	trmt13	97	50.524	ENSUMAG00000007901	TRMT13	95	48.922	Ursus_maritimus
ENSORLG00020005972	trmt13	77	63.158	ENSVPAG00000001034	TRMT13	80	63.158	Vicugna_pacos
ENSORLG00020005972	trmt13	97	48.319	ENSVVUG00000021996	TRMT13	95	48.283	Vulpes_vulpes
ENSORLG00020005972	trmt13	98	48.451	ENSXETG00000013204	trmt13	98	48.899	Xenopus_tropicalis
ENSORLG00020005972	trmt13	97	60.000	ENSXMAG00000010765	trmt13	99	60.000	Xiphophorus_maculatus