EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020006029 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 4826 bases
Position: chr10:5542053-5546878
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020005233	RRM_1	PF00076.22	1.5e-31	1	2
ENSORLP00020005233	RRM_1	PF00076.22	1.5e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020006637	-	864	-	ENSORLP00020005233	287 (aa)	-	-

Gene Model

Click here to download ENSORLG00020006029's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020006029's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020006029	-	59	37.975	ENSORLG00020021556	msi2a	59	37.975
ENSORLG00020006029	-	62	34.000	ENSORLG00020012133	hnrnpaba	54	36.957
ENSORLG00020006029	-	62	35.000	ENSORLG00020007776	hnrnpabb	57	34.615
ENSORLG00020006029	-	81	67.010	ENSORLG00020022498	-	93	67.010
ENSORLG00020006029	-	58	50.602	ENSORLG00020006582	hnrnpa1a	79	50.602
ENSORLG00020006029	-	60	46.821	ENSORLG00020020788	hnrnpa3	56	46.821
ENSORLG00020006029	-	60	59.639	ENSORLG00020007171	-	95	59.639
ENSORLG00020006029	-	93	87.973	ENSORLG00020007505	-	97	87.973
ENSORLG00020006029	-	94	77.097	ENSORLG00020007109	-	99	84.590
ENSORLG00020006029	-	59	35.928	ENSORLG00020008266	MSI1	57	35.928
ENSORLG00020006029	-	81	62.449	ENSORLG00020022487	-	69	68.041
ENSORLG00020006029	-	93	93.929	ENSORLG00020006043	-	95	93.929
ENSORLG00020006029	-	93	79.402	ENSORLG00020008203	-	97	86.942
ENSORLG00020006029	-	67	95.455	ENSORLG00020007084	-	82	95.455
ENSORLG00020006029	-	57	44.000	ENSORLG00020014780	hnrnpd	52	40.230
ENSORLG00020006029	-	62	32.639	ENSORLG00020013159	tardbpl	53	32.639
ENSORLG00020006029	-	60	74.566	ENSORLG00020007148	hnrnpa0a	77	57.576

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020006029	-	62	74.026	ENSAOCG00000015951	-	93	74.026	Amphiprion_ocellaris
ENSORLG00020006029	-	67	55.497	ENSAOCG00000015914	-	64	58.960	Amphiprion_ocellaris
ENSORLG00020006029	-	62	74.026	ENSAPEG00000002274	-	93	74.026	Amphiprion_percula
ENSORLG00020006029	-	60	58.960	ENSAPEG00000002224	-	74	58.960	Amphiprion_percula
ENSORLG00020006029	-	60	59.538	ENSACLG00000008978	-	82	59.538	Astatotilapia_calliptera
ENSORLG00020006029	-	60	57.803	ENSCVAG00000008324	-	76	57.803	Cyprinodon_variegatus
ENSORLG00020006029	-	60	43.195	FBgn0001215	Hrb98DE	55	43.195	Drosophila_melanogaster
ENSORLG00020006029	-	58	37.975	ENSEBUG00000010003	-	88	37.975	Eptatretus_burgeri
ENSORLG00020006029	-	58	61.146	ENSELUG00000014407	-	96	61.146	Esox_lucius
ENSORLG00020006029	-	60	59.538	ENSHBUG00000023867	-	82	59.538	Haplochromis_burtoni
ENSORLG00020006029	-	60	57.558	ENSHCOG00000007180	-	73	59.281	Hippocampus_comes
ENSORLG00020006029	-	60	57.233	ENSLBEG00000006362	-	78	57.233	Labrus_bergylta
ENSORLG00020006029	-	55	61.261	ENSLOCG00000012121	-	60	61.261	Lepisosteus_oculatus
ENSORLG00020006029	-	60	56.647	ENSMAMG00000017728	-	67	56.647	Mastacembelus_armatus
ENSORLG00020006029	-	60	59.538	ENSMZEG00005001063	-	80	59.538	Maylandia_zebra
ENSORLG00020006029	-	58	70.323	ENSMMOG00000004242	-	96	70.323	Mola_mola
ENSORLG00020006029	-	71	42.326	ENSMEUG00000003051	-	53	48.193	Notamacropus_eugenii
ENSORLG00020006029	-	93	87.629	ENSORLG00000023176	-	96	82.131	Oryzias_latipes
ENSORLG00020006029	-	93	91.786	ENSORLG00000023542	-	96	91.786	Oryzias_latipes
ENSORLG00020006029	-	58	71.687	ENSORLG00000030284	-	70	65.414	Oryzias_latipes
ENSORLG00020006029	-	95	53.696	ENSOMEG00000023475	-	95	62.887	Oryzias_melastigma
ENSORLG00020006029	-	95	52.734	ENSOMEG00000012368	-	81	66.860	Oryzias_melastigma
ENSORLG00020006029	-	61	63.190	ENSOMEG00000009566	-	91	59.887	Oryzias_melastigma
ENSORLG00020006029	-	93	42.177	ENSOMEG00000006327	-	94	40.678	Oryzias_melastigma
ENSORLG00020006029	-	94	66.471	ENSOMEG00000006903	-	79	66.471	Oryzias_melastigma
ENSORLG00020006029	-	94	61.194	ENSOMEG00000002509	-	98	61.979	Oryzias_melastigma
ENSORLG00020006029	-	94	66.279	ENSOMEG00000002000	-	85	66.279	Oryzias_melastigma
ENSORLG00020006029	-	70	59.483	ENSOMEG00000002084	-	70	63.265	Oryzias_melastigma
ENSORLG00020006029	-	95	55.285	ENSOMEG00000021030	-	89	62.176	Oryzias_melastigma
ENSORLG00020006029	-	60	57.803	ENSPREG00000010603	-	59	57.803	Poecilia_reticulata
ENSORLG00020006029	-	60	59.538	ENSPNYG00000020763	-	82	59.538	Pundamilia_nyererei
ENSORLG00020006029	-	55	61.783	ENSPNAG00000018051	-	80	61.783	Pygocentrus_nattereri
ENSORLG00020006029	-	58	57.485	ENSSHAG00000015609	-	79	57.485	Sarcophilus_harrisii
ENSORLG00020006029	-	60	60.377	ENSSDUG00000002394	-	86	60.377	Seriola_dumerili
ENSORLG00020006029	-	62	74.830	ENSSLDG00000024685	-	84	74.830	Seriola_lalandi_dorsalis