EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020006043 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein A0-like
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 4091 bases
Position: chr10:5530765-5534855
Accession: 101170194
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020005238	RRM_1	PF00076.22	1.7e-31	1	2
ENSORLP00020005238	RRM_1	PF00076.22	1.7e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020006620	-	891	XM_023959438	ENSORLP00020005238	296 (aa)	XP_023815206	-

Gene Model

Click here to download ENSORLG00020006043's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020006043's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020006043	-	57	34.722	ENSORLG00020012447	-	83	34.722
ENSORLG00020006043	-	66	74.872	ENSORLG00020007148	hnrnpa0a	71	66.045
ENSORLG00020006043	-	72	32.727	ENSORLG00020021556	msi2a	59	36.000
ENSORLG00020006043	-	57	38.636	ENSORLG00020012133	hnrnpaba	82	38.636
ENSORLG00020006043	-	70	38.636	ENSORLG00020007776	hnrnpabb	57	38.636
ENSORLG00020006043	-	85	66.364	ENSORLG00020022498	-	93	70.000
ENSORLG00020006043	-	56	44.000	ENSORLG00020014780	hnrnpd	51	40.230
ENSORLG00020006043	-	61	50.829	ENSORLG00020006582	hnrnpa1a	84	51.111
ENSORLG00020006043	-	60	48.603	ENSORLG00020020788	hnrnpa3	94	40.000
ENSORLG00020006043	-	62	58.721	ENSORLG00020007171	-	96	58.721
ENSORLG00020006043	-	97	92.256	ENSORLG00020007505	-	99	92.256
ENSORLG00020006043	-	95	93.929	ENSORLG00020006029	-	93	93.929
ENSORLG00020006043	-	96	89.474	ENSORLG00020007109	-	99	89.474
ENSORLG00020006043	-	71	37.363	ENSORLG00020015195	dazap1	54	37.363
ENSORLG00020006043	-	63	36.022	ENSORLG00020008266	MSI1	59	35.979
ENSORLG00020006043	-	90	60.215	ENSORLG00020022487	-	69	72.081
ENSORLG00020006043	-	62	32.824	ENSORLG00020021206	tardbp	50	32.824
ENSORLG00020006043	-	96	91.126	ENSORLG00020008203	-	98	91.468
ENSORLG00020006043	-	70	95.513	ENSORLG00020007084	-	84	95.513
ENSORLG00020006043	-	66	31.579	ENSORLG00020013159	tardbpl	68	31.579

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020006043	-	59	51.445	ENSAPOG00000019369	-	53	51.445	Acanthochromis_polyacanthus
ENSORLG00020006043	-	61	62.360	ENSACIG00000021815	-	88	61.878	Amphilophus_citrinellus
ENSORLG00020006043	-	59	51.445	ENSAOCG00000005289	-	89	39.731	Amphiprion_ocellaris
ENSORLG00020006043	-	59	51.445	ENSAPEG00000004179	-	89	39.731	Amphiprion_percula
ENSORLG00020006043	-	60	75.000	ENSATEG00000003423	-	74	75.000	Anabas_testudineus
ENSORLG00020006043	-	59	50.000	ENSATEG00000022918	hnrnpa1a	91	50.000	Anabas_testudineus
ENSORLG00020006043	-	61	58.791	ENSACAG00000017109	-	62	54.950	Anolis_carolinensis
ENSORLG00020006043	-	59	51.724	ENSACLG00000006940	-	53	51.724	Astatotilapia_calliptera
ENSORLG00020006043	-	59	52.273	ENSAMXG00000006296	hnrnpa1a	79	42.907	Astyanax_mexicanus
ENSORLG00020006043	-	63	61.081	ENSAMXG00000037730	-	93	50.470	Astyanax_mexicanus
ENSORLG00020006043	-	59	51.744	ENSCSEG00000007589	hnrnpa1a	65	51.744	Cynoglossus_semilaevis
ENSORLG00020006043	-	61	66.272	ENSCSEG00000014051	-	70	67.066	Cynoglossus_semilaevis
ENSORLG00020006043	-	59	51.724	ENSCVAG00000012637	hnrnpa1a	88	42.424	Cyprinodon_variegatus
ENSORLG00020006043	-	59	48.864	ENSDARG00000011020	hnrnpa1a	71	43.273	Danio_rerio
ENSORLG00020006043	-	61	61.326	ENSDORG00000026425	-	57	57.071	Dipodomys_ordii
ENSORLG00020006043	-	59	52.023	ENSELUG00000007372	-	66	40.940	Esox_lucius
ENSORLG00020006043	-	60	61.364	ENSGMOG00000020353	-	94	61.364	Gadus_morhua
ENSORLG00020006043	-	59	51.724	ENSGAFG00000007751	-	88	42.282	Gambusia_affinis
ENSORLG00020006043	-	59	60.694	ENSGAFG00000016803	-	54	59.551	Gambusia_affinis
ENSORLG00020006043	-	60	49.275	ENSGACG00000009435	-	87	40.530	Gasterosteus_aculeatus
ENSORLG00020006043	-	59	51.724	ENSHBUG00000005647	hnrnpa1a	53	51.724	Haplochromis_burtoni
ENSORLG00020006043	-	66	46.939	ENSIPUG00000002023	hnrnpa1a	70	49.180	Ictalurus_punctatus
ENSORLG00020006043	-	61	52.273	ENSIPUG00000022440	-	72	52.273	Ictalurus_punctatus
ENSORLG00020006043	-	61	64.045	ENSIPUG00000001991	-	77	64.045	Ictalurus_punctatus
ENSORLG00020006043	-	59	51.724	ENSKMAG00000020859	-	88	38.111	Kryptolebias_marmoratus
ENSORLG00020006043	-	59	50.575	ENSLBEG00000010010	hnrnpa1a	52	49.721	Labrus_bergylta
ENSORLG00020006043	-	59	43.182	ENSMFAG00000028351	-	91	37.377	Macaca_fascicularis
ENSORLG00020006043	-	59	50.575	ENSMAMG00000007606	-	52	50.575	Mastacembelus_armatus
ENSORLG00020006043	-	59	51.724	ENSMZEG00005027173	hnrnpa1a	53	51.724	Maylandia_zebra
ENSORLG00020006043	-	59	50.289	ENSMMOG00000008251	hnrnpa1a	73	50.289	Mola_mola
ENSORLG00020006043	-	60	61.272	ENSMALG00000008886	-	87	60.112	Monopterus_albus
ENSORLG00020006043	-	59	50.000	ENSMALG00000014091	hnrnpa1a	52	50.000	Monopterus_albus
ENSORLG00020006043	-	59	51.724	ENSNBRG00000018441	-	53	51.724	Neolamprologus_brichardi
ENSORLG00020006043	-	60	74.566	ENSNBRG00000014469	-	80	74.566	Neolamprologus_brichardi
ENSORLG00020006043	-	59	51.724	ENSORLG00000008001	-	53	52.023	Oryzias_latipes
ENSORLG00020006043	-	74	70.755	ENSORLG00000029240	-	98	71.066	Oryzias_latipes
ENSORLG00020006043	-	59	51.724	ENSORLG00015022294	-	54	51.724	Oryzias_latipes_hsok
ENSORLG00020006043	-	59	51.724	ENSOMEG00000015959	-	54	51.724	Oryzias_melastigma
ENSORLG00020006043	-	61	65.746	ENSPMGG00000016392	-	91	65.746	Periophthalmus_magnuspinnatus
ENSORLG00020006043	-	81	43.096	ENSPMGG00000011804	hnrnpa1a	83	42.806	Periophthalmus_magnuspinnatus
ENSORLG00020006043	-	59	51.724	ENSPFOG00000001825	-	52	51.724	Poecilia_formosa
ENSORLG00020006043	-	59	51.724	ENSPMEG00000002425	-	52	51.724	Poecilia_mexicana
ENSORLG00020006043	-	60	74.566	ENSPNYG00000020729	-	88	74.566	Pundamilia_nyererei
ENSORLG00020006043	-	62	51.366	ENSPNAG00000007752	hnrnpa1a	73	51.366	Pygocentrus_nattereri
ENSORLG00020006043	-	61	51.445	ENSPNAG00000021630	-	91	41.196	Pygocentrus_nattereri
ENSORLG00020006043	-	61	60.000	ENSSMAG00000010246	-	78	60.000	Scophthalmus_maximus
ENSORLG00020006043	-	60	70.552	ENSSMAG00000010279	-	92	70.552	Scophthalmus_maximus
ENSORLG00020006043	-	59	50.867	ENSSMAG00000004641	hnrnpa1a	88	42.958	Scophthalmus_maximus
ENSORLG00020006043	-	63	72.131	ENSSDUG00000002431	-	87	72.131	Seriola_dumerili
ENSORLG00020006043	-	61	48.619	ENSSDUG00000013908	hnrnpa1a	95	39.676	Seriola_dumerili
ENSORLG00020006043	-	60	49.697	ENSSLDG00000003718	hnrnpa1a	92	38.655	Seriola_lalandi_dorsalis
ENSORLG00020006043	-	59	52.023	ENSSPAG00000018518	-	88	43.599	Stegastes_partitus
ENSORLG00020006043	-	59	49.425	ENSTRUG00000020491	-	90	42.268	Takifugu_rubripes
ENSORLG00020006043	-	71	64.115	ENSTNIG00000007398	-	94	60.000	Tetraodon_nigroviridis
ENSORLG00020006043	-	59	52.055	ENSXCOG00000009001	-	76	51.149	Xiphophorus_couchianus
ENSORLG00020006043	-	59	51.149	ENSXMAG00000008076	-	88	42.193	Xiphophorus_maculatus