EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020006124 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 117982 bases
Position: chr21:13682095-13800076
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020024613	KH_1	PF00013.29	9.8e-55	1	3
ENSORLP00020024613	KH_1	PF00013.29	9.8e-55	2	3
ENSORLP00020024613	KH_1	PF00013.29	9.8e-55	3	3
ENSORLP00020024599	KH_1	PF00013.29	1.1e-54	1	3
ENSORLP00020024599	KH_1	PF00013.29	1.1e-54	2	3
ENSORLP00020024599	KH_1	PF00013.29	1.1e-54	3	3
ENSORLP00020005263	KH_1	PF00013.29	9.6e-51	1	3
ENSORLP00020005263	KH_1	PF00013.29	9.6e-51	2	3
ENSORLP00020005263	KH_1	PF00013.29	9.6e-51	3	3
ENSORLP00020024613	KH_2	PF07650.17	1.6e-14	1	1
ENSORLP00020024599	KH_2	PF07650.17	2.1e-14	1	1
ENSORLP00020005263	KH_2	PF07650.17	8.3e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020006551	-	1633	-	ENSORLP00020024599	327 (aa)	-	-
ENSORLT00020006507	-	1995	-	ENSORLP00020024613	321 (aa)	-	-
ENSORLT00020006585	-	942	-	ENSORLP00020005263	313 (aa)	-	-

Gene Model

Click here to download ENSORLG00020006124's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020006124's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020006124	-	94	39.474	ENSORLG00020019124	-	61	39.437
ENSORLG00020006124	-	78	52.055	ENSORLG00020008118	hnrpkl	57	52.857
ENSORLG00020006124	-	94	39.062	ENSORLG00020019624	fubp3	63	38.889
ENSORLG00020006124	-	94	31.690	ENSORLG00020018835	igf2bp1	57	30.657
ENSORLG00020006124	-	97	34.507	ENSORLG00020003562	igf2bp3	62	34.507
ENSORLG00020006124	-	98	31.544	ENSORLG00020013143	-	66	31.544
ENSORLG00020006124	-	97	73.651	ENSORLG00020003139	zgc:110045	87	74.146
ENSORLG00020006124	-	94	62.500	ENSORLG00020001183	-	71	62.577
ENSORLG00020006124	-	80	52.857	ENSORLG00020019741	hnrnpk	60	52.857
ENSORLG00020006124	-	77	36.782	ENSORLG00020005908	fubp1	58	39.394
ENSORLG00020006124	-	97	35.955	ENSORLG00020001556	igf2bp2b	66	34.066
ENSORLG00020006124	-	90	40.845	ENSORLG00020004573	nova1	53	40.845
ENSORLG00020006124	-	99	95.298	ENSORLG00020012671	pcbp3	99	95.298
ENSORLG00020006124	-	97	80.000	ENSORLG00020017901	PCBP2	97	80.000
ENSORLG00020006124	-	99	78.056	ENSORLG00020016290	pcbp2	99	78.056

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020006124	-	99	94.839	ENSAPOG00000020003	pcbp3	89	94.839	Acanthochromis_polyacanthus
ENSORLG00020006124	-	99	98.466	ENSAPOG00000016582	-	99	98.466	Acanthochromis_polyacanthus
ENSORLG00020006124	-	98	91.291	ENSAMEG00000001697	-	99	87.069	Ailuropoda_melanoleuca
ENSORLG00020006124	-	99	87.679	ENSACIG00000010933	pcbp3	99	87.679	Amphilophus_citrinellus
ENSORLG00020006124	-	100	95.077	ENSACIG00000002739	-	100	95.077	Amphilophus_citrinellus
ENSORLG00020006124	-	97	96.774	ENSAOCG00000008592	-	98	96.774	Amphiprion_ocellaris
ENSORLG00020006124	-	95	94.539	ENSAOCG00000007806	-	100	94.539	Amphiprion_ocellaris
ENSORLG00020006124	-	99	89.459	ENSAPEG00000008011	pcbp3	99	89.459	Amphiprion_percula
ENSORLG00020006124	-	100	97.196	ENSAPEG00000005209	-	100	97.196	Amphiprion_percula
ENSORLG00020006124	-	96	89.846	ENSATEG00000015787	-	100	89.846	Anabas_testudineus
ENSORLG00020006124	-	100	98.101	ENSATEG00000009833	-	100	98.101	Anabas_testudineus
ENSORLG00020006124	-	98	75.272	ENSAPLG00000008951	-	82	75.272	Anas_platyrhynchos
ENSORLG00020006124	-	98	92.683	ENSAPLG00000002975	-	98	92.683	Anas_platyrhynchos
ENSORLG00020006124	-	98	85.434	ENSACAG00000004607	-	99	85.434	Anolis_carolinensis
ENSORLG00020006124	-	99	82.799	ENSACAG00000009819	-	99	82.799	Anolis_carolinensis
ENSORLG00020006124	-	95	96.218	ENSANAG00000030702	-	100	96.218	Aotus_nancymaae
ENSORLG00020006124	-	99	89.174	ENSACLG00000011835	pcbp3	99	89.174	Astatotilapia_calliptera
ENSORLG00020006124	-	100	98.442	ENSACLG00000003801	-	100	98.442	Astatotilapia_calliptera
ENSORLG00020006124	-	96	94.371	ENSAMXG00000013588	-	100	94.371	Astyanax_mexicanus
ENSORLG00020006124	-	99	91.117	ENSAMXG00000003440	pcbp3	99	91.117	Astyanax_mexicanus
ENSORLG00020006124	-	95	69.876	ENSAMXG00000001760	zgc:110045	72	69.876	Astyanax_mexicanus
ENSORLG00020006124	-	90	96.943	ENSCAFG00020019472	-	81	96.943	Canis_lupus_dingo
ENSORLG00020006124	-	98	97.134	ENSCSAG00000007440	-	89	97.134	Chlorocebus_sabaeus
ENSORLG00020006124	-	95	97.368	ENSCPBG00000012151	-	99	91.317	Chrysemys_picta_bellii
ENSORLG00020006124	-	97	82.883	ENSCPBG00000000733	-	77	80.229	Chrysemys_picta_bellii
ENSORLG00020006124	-	96	95.695	ENSCSEG00000000822	pcbp3	99	95.695	Cynoglossus_semilaevis
ENSORLG00020006124	-	100	80.236	ENSCSEG00000016984	-	100	80.236	Cynoglossus_semilaevis
ENSORLG00020006124	-	100	98.442	ENSCVAG00000005262	-	100	98.442	Cyprinodon_variegatus
ENSORLG00020006124	-	99	89.174	ENSCVAG00000014482	pcbp3	99	89.174	Cyprinodon_variegatus
ENSORLG00020006124	-	100	91.860	ENSDARG00000054378	pcbp3	100	91.860	Danio_rerio
ENSORLG00020006124	-	98	83.121	ENSETEG00000015988	-	98	83.121	Echinops_telfairi
ENSORLG00020006124	-	95	72.857	ENSEBUG00000016192	pcbp3	99	73.234	Eptatretus_burgeri
ENSORLG00020006124	-	98	82.019	ENSEBUG00000007485	-	92	82.648	Eptatretus_burgeri
ENSORLG00020006124	-	93	69.721	ENSEBUG00000005495	pcbp3	75	69.721	Eptatretus_burgeri
ENSORLG00020006124	-	99	89.489	ENSELUG00000003521	pcbp3	99	89.489	Esox_lucius
ENSORLG00020006124	-	99	97.239	ENSELUG00000001560	-	90	97.239	Esox_lucius
ENSORLG00020006124	-	98	75.543	ENSFALG00000004411	-	77	75.543	Ficedula_albicollis
ENSORLG00020006124	-	98	96.178	ENSFALG00000003949	-	98	96.178	Ficedula_albicollis
ENSORLG00020006124	-	100	96.865	ENSFHEG00000006539	-	100	96.865	Fundulus_heteroclitus
ENSORLG00020006124	-	97	96.066	ENSFHEG00000016615	pcbp3	96	96.066	Fundulus_heteroclitus
ENSORLG00020006124	-	95	70.517	ENSGMOG00000008611	-	99	70.517	Gadus_morhua
ENSORLG00020006124	-	97	80.597	ENSGMOG00000011992	pcbp3	97	80.597	Gadus_morhua
ENSORLG00020006124	-	97	82.440	ENSGALG00000013155	-	99	82.209	Gallus_gallus
ENSORLG00020006124	-	98	83.099	ENSGALG00000004394	-	98	89.130	Gallus_gallus
ENSORLG00020006124	-	99	98.160	ENSGAFG00000010274	-	99	98.160	Gambusia_affinis
ENSORLG00020006124	-	100	85.337	ENSGAFG00000011430	pcbp3	99	85.337	Gambusia_affinis
ENSORLG00020006124	-	100	91.520	ENSGACG00000002266	-	100	91.520	Gasterosteus_aculeatus
ENSORLG00020006124	-	100	79.396	ENSGACG00000014955	-	100	79.396	Gasterosteus_aculeatus
ENSORLG00020006124	-	76	90.217	ENSGAGG00000006956	-	76	90.217	Gopherus_agassizii
ENSORLG00020006124	-	91	89.139	ENSGAGG00000000271	-	100	89.139	Gopherus_agassizii
ENSORLG00020006124	-	100	98.442	ENSHBUG00000021782	-	100	98.442	Haplochromis_burtoni
ENSORLG00020006124	-	97	93.548	ENSHBUG00000010697	pcbp3	98	93.548	Haplochromis_burtoni
ENSORLG00020006124	-	100	93.769	ENSHCOG00000006067	-	100	93.769	Hippocampus_comes
ENSORLG00020006124	-	99	89.429	ENSHCOG00000017868	pcbp3	99	89.429	Hippocampus_comes
ENSORLG00020006124	-	100	98.083	ENSIPUG00000006238	pcbp3	100	98.083	Ictalurus_punctatus
ENSORLG00020006124	-	99	89.459	ENSKMAG00000003046	pcbp3	99	89.459	Kryptolebias_marmoratus
ENSORLG00020006124	-	99	97.239	ENSKMAG00000018530	-	99	97.239	Kryptolebias_marmoratus
ENSORLG00020006124	-	99	93.930	ENSLBEG00000006201	pcbp3	98	93.930	Labrus_bergylta
ENSORLG00020006124	-	100	83.282	ENSLBEG00000006542	-	100	83.282	Labrus_bergylta
ENSORLG00020006124	-	97	77.183	ENSLACG00000010804	zgc:110045	78	74.933	Latimeria_chalumnae
ENSORLG00020006124	-	97	83.473	ENSLACG00000010386	pcbp3	78	81.081	Latimeria_chalumnae
ENSORLG00020006124	-	95	82.875	ENSLOCG00000005058	zgc:110045	80	83.180	Lepisosteus_oculatus
ENSORLG00020006124	-	98	91.916	ENSLOCG00000009369	pcbp3	99	91.916	Lepisosteus_oculatus
ENSORLG00020006124	-	96	96.358	ENSMAMG00000022336	pcbp3	93	96.358	Mastacembelus_armatus
ENSORLG00020006124	-	100	96.835	ENSMAMG00000011620	-	100	96.835	Mastacembelus_armatus
ENSORLG00020006124	-	99	88.131	ENSMZEG00005014882	-	99	89.021	Maylandia_zebra
ENSORLG00020006124	-	99	87.393	ENSMZEG00005008993	pcbp3	99	87.393	Maylandia_zebra
ENSORLG00020006124	-	94	80.870	ENSMGAG00000001883	-	96	80.980	Meleagris_gallopavo
ENSORLG00020006124	-	98	75.543	ENSMGAG00000006794	-	77	75.543	Meleagris_gallopavo
ENSORLG00020006124	-	97	92.949	ENSMMOG00000000730	pcbp3	88	92.949	Mola_mola
ENSORLG00020006124	-	100	98.083	ENSMMOG00000005216	-	100	98.083	Mola_mola
ENSORLG00020006124	-	73	77.103	ENSMODG00000027884	-	93	77.103	Monodelphis_domestica
ENSORLG00020006124	-	99	87.143	ENSMALG00000000691	pcbp3	99	87.143	Monopterus_albus
ENSORLG00020006124	-	100	85.000	ENSMPUG00000001779	-	92	85.000	Mustela_putorius_furo
ENSORLG00020006124	-	99	87.463	ENSNBRG00000016409	-	99	87.393	Neolamprologus_brichardi
ENSORLG00020006124	-	98	89.783	ENSNBRG00000016714	-	99	89.783	Neolamprologus_brichardi
ENSORLG00020006124	-	95	82.849	ENSOPRG00000003431	-	99	82.849	Ochotona_princeps
ENSORLG00020006124	-	100	98.442	ENSONIG00000004611	-	100	98.442	Oreochromis_niloticus
ENSORLG00020006124	-	97	84.419	ENSONIG00000012122	-	98	84.419	Oreochromis_niloticus
ENSORLG00020006124	-	98	96.178	ENSOCUG00000002696	-	89	96.178	Oryctolagus_cuniculus
ENSORLG00020006124	-	97	96.774	ENSORLG00000000059	pcbp3	100	96.774	Oryzias_latipes
ENSORLG00020006124	-	100	99.694	ENSORLG00000022739	-	100	99.694	Oryzias_latipes
ENSORLG00020006124	-	99	95.298	ENSORLG00015000429	pcbp3	99	95.298	Oryzias_latipes_hsok
ENSORLG00020006124	-	100	99.694	ENSORLG00015008051	-	100	99.694	Oryzias_latipes_hsok
ENSORLG00020006124	-	100	99.065	ENSOMEG00000020162	-	100	99.065	Oryzias_melastigma
ENSORLG00020006124	-	95	94.138	ENSOMEG00000020811	pcbp3	99	94.138	Oryzias_melastigma
ENSORLG00020006124	-	98	83.611	ENSOGAG00000008044	-	99	83.611	Otolemur_garnettii
ENSORLG00020006124	-	100	96.508	ENSPKIG00000019329	pcbp3	100	96.508	Paramormyrops_kingsleyae
ENSORLG00020006124	-	76	88.827	ENSPKIG00000020913	-	80	88.827	Paramormyrops_kingsleyae
ENSORLG00020006124	-	91	80.894	ENSPSIG00000008350	-	72	77.481	Pelodiscus_sinensis
ENSORLG00020006124	-	98	83.384	ENSPSIG00000014970	-	98	83.988	Pelodiscus_sinensis
ENSORLG00020006124	-	99	89.398	ENSPMGG00000022383	pcbp3	99	89.398	Periophthalmus_magnuspinnatus
ENSORLG00020006124	-	77	88.830	ENSPMAG00000004637	-	97	88.830	Petromyzon_marinus
ENSORLG00020006124	-	98	73.270	ENSPMAG00000004551	pcbp3	91	73.270	Petromyzon_marinus
ENSORLG00020006124	-	98	90.208	ENSPCIG00000028092	-	99	90.208	Phascolarctos_cinereus
ENSORLG00020006124	-	100	81.180	ENSPLAG00000011449	pcbp3	99	75.188	Poecilia_latipinna
ENSORLG00020006124	-	99	94.410	ENSPLAG00000004074	-	92	94.410	Poecilia_latipinna
ENSORLG00020006124	-	99	91.071	ENSPMEG00000006653	-	99	91.071	Poecilia_mexicana
ENSORLG00020006124	-	99	88.669	ENSPMEG00000021239	pcbp3	99	88.669	Poecilia_mexicana
ENSORLG00020006124	-	100	98.403	ENSPREG00000020585	-	100	98.403	Poecilia_reticulata
ENSORLG00020006124	-	96	94.408	ENSPREG00000015736	pcbp3	99	94.408	Poecilia_reticulata
ENSORLG00020006124	-	97	93.871	ENSPNYG00000012326	pcbp3	95	93.871	Pundamilia_nyererei
ENSORLG00020006124	-	100	98.403	ENSPNYG00000013205	-	100	98.403	Pundamilia_nyererei
ENSORLG00020006124	-	96	95.000	ENSPNAG00000008541	-	98	95.000	Pygocentrus_nattereri
ENSORLG00020006124	-	100	98.131	ENSPNAG00000015104	pcbp3	100	98.131	Pygocentrus_nattereri
ENSORLG00020006124	-	98	96.815	ENSRNOG00000001245	Pcbp3	98	96.815	Rattus_norvegicus
ENSORLG00020006124	-	100	85.285	ENSRBIG00000028177	-	92	85.285	Rhinopithecus_bieti
ENSORLG00020006124	-	98	90.719	ENSSHAG00000007890	-	99	90.719	Sarcophilus_harrisii
ENSORLG00020006124	-	99	88.825	ENSSFOG00015014706	pcbp3	99	88.825	Scleropages_formosus
ENSORLG00020006124	-	99	97.239	ENSSFOG00015010205	pcbp3	99	97.239	Scleropages_formosus
ENSORLG00020006124	-	97	83.333	ENSSFOG00015007118	-	95	83.333	Scleropages_formosus
ENSORLG00020006124	-	96	96.689	ENSSMAG00000011929	pcbp3	97	96.689	Scophthalmus_maximus
ENSORLG00020006124	-	100	98.131	ENSSMAG00000003135	-	100	98.131	Scophthalmus_maximus
ENSORLG00020006124	-	99	92.169	ENSSDUG00000008502	-	99	92.169	Seriola_dumerili
ENSORLG00020006124	-	96	88.991	ENSSDUG00000011608	pcbp3	99	88.991	Seriola_dumerili
ENSORLG00020006124	-	99	98.466	ENSSLDG00000020161	-	99	98.466	Seriola_lalandi_dorsalis
ENSORLG00020006124	-	96	88.991	ENSSLDG00000008518	pcbp3	99	88.991	Seriola_lalandi_dorsalis
ENSORLG00020006124	-	92	82.007	ENSSPUG00000013214	-	90	84.264	Sphenodon_punctatus
ENSORLG00020006124	-	95	94.881	ENSSPAG00000004190	-	100	94.881	Stegastes_partitus
ENSORLG00020006124	-	99	77.077	ENSSPAG00000023341	-	99	77.077	Stegastes_partitus
ENSORLG00020006124	-	98	87.725	ENSTGUG00000003316	-	99	87.725	Taeniopygia_guttata
ENSORLG00020006124	-	98	89.809	ENSTGUG00000008158	-	99	89.809	Taeniopygia_guttata
ENSORLG00020006124	-	95	98.958	ENSTRUG00000006280	-	99	92.628	Takifugu_rubripes
ENSORLG00020006124	-	99	90.855	ENSTRUG00000013604	pcbp3	99	90.855	Takifugu_rubripes
ENSORLG00020006124	-	98	84.034	ENSTTRG00000015075	-	99	84.034	Tursiops_truncatus
ENSORLG00020006124	-	98	89.820	ENSXETG00000011483	pcbp1	99	89.820	Xenopus_tropicalis
ENSORLG00020006124	-	94	74.576	ENSXETG00000010491	pcbp2	78	74.576	Xenopus_tropicalis
ENSORLG00020006124	-	99	88.669	ENSXCOG00000020481	pcbp3	99	88.669	Xiphophorus_couchianus
ENSORLG00020006124	-	99	89.459	ENSXMAG00000008175	pcbp3	99	89.459	Xiphophorus_maculatus
ENSORLG00020006124	-	99	98.466	ENSXMAG00000028711	-	99	98.466	Xiphophorus_maculatus