EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020006329 (Gene tree)
Gene ID: -
Gene Symbol: mtrex
Alias: -
Full Name: Mtr4 exosome RNA helicase
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 21152 bases
Position: chr12:8212146-8233297
Accession: ZDB-GENE-040426-2854
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020005285	rRNA_proc-arch	PF13234.6	2.7e-88	1	1
ENSORLP00020005311	rRNA_proc-arch	PF13234.6	2.7e-88	1	1
ENSORLP00020005347	rRNA_proc-arch	PF13234.6	2.8e-88	1	1
ENSORLP00020005285	DEAD	PF00270.29	4.7e-17	1	1
ENSORLP00020005311	DEAD	PF00270.29	4.9e-17	1	1
ENSORLP00020005347	DEAD	PF00270.29	5.1e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020006504	-	3069	-	ENSORLP00020005311	1022 (aa)	-	-
ENSORLT00020006545	-	2994	-	ENSORLP00020005285	997 (aa)	-	-
ENSORLT00020006444	-	3600	-	ENSORLP00020005347	1036 (aa)	-	-

Gene Model

Click here to download ENSORLG00020006329's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020006329's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020006329	mtrex	94	34.690	ENSORLG00020009462	skiv2l	81	35.649

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020006329	mtrex	100	82.173	ENSG00000039123	MTREX	100	82.364	Homo_sapiens
ENSORLG00020006329	mtrex	100	93.250	ENSAPOG00000007814	mtrex	100	93.057	Acanthochromis_polyacanthus
ENSORLG00020006329	mtrex	100	82.476	ENSAMEG00000013856	MTREX	100	82.476	Ailuropoda_melanoleuca
ENSORLG00020006329	mtrex	98	92.661	ENSACIG00000015117	mtrex	98	92.559	Amphilophus_citrinellus
ENSORLG00020006329	mtrex	100	93.346	ENSAOCG00000011884	mtrex	100	93.346	Amphiprion_ocellaris
ENSORLG00020006329	mtrex	100	93.250	ENSAPEG00000019384	mtrex	100	93.250	Amphiprion_percula
ENSORLG00020006329	mtrex	100	93.243	ENSATEG00000015117	mtrex	100	93.243	Anabas_testudineus
ENSORLG00020006329	mtrex	94	86.610	ENSAPLG00000009694	MTREX	98	86.066	Anas_platyrhynchos
ENSORLG00020006329	mtrex	100	83.572	ENSACAG00000015200	MTREX	96	83.572	Anolis_carolinensis
ENSORLG00020006329	mtrex	100	82.459	ENSANAG00000023095	MTREX	100	82.650	Aotus_nancymaae
ENSORLG00020006329	mtrex	100	92.575	ENSACLG00000001921	mtrex	100	92.478	Astatotilapia_calliptera
ENSORLG00020006329	mtrex	95	86.322	ENSAMXG00000018751	mtrex	99	86.322	Astyanax_mexicanus
ENSORLG00020006329	mtrex	100	82.555	ENSBTAG00000010518	MTREX	100	82.555	Bos_taurus
ENSORLG00020006329	mtrex	93	53.606	WBGene00012342	mtr-4	91	53.715	Caenorhabditis_elegans
ENSORLG00020006329	mtrex	100	81.801	ENSCJAG00000001773	MTREX	100	82.085	Callithrix_jacchus
ENSORLG00020006329	mtrex	100	82.459	ENSCAFG00000006818	MTREX	100	82.459	Canis_familiaris
ENSORLG00020006329	mtrex	100	82.459	ENSCAFG00020024352	MTREX	100	82.459	Canis_lupus_dingo
ENSORLG00020006329	mtrex	100	82.364	ENSCHIG00000024413	MTREX	100	82.459	Capra_hircus
ENSORLG00020006329	mtrex	93	84.740	ENSTSYG00000007389	MTREX	100	84.740	Carlito_syrichta
ENSORLG00020006329	mtrex	87	75.455	ENSCAPG00000008696	MTREX	95	75.455	Cavia_aperea
ENSORLG00020006329	mtrex	100	82.426	ENSCPOG00000009797	MTREX	100	82.336	Cavia_porcellus
ENSORLG00020006329	mtrex	100	82.459	ENSCCAG00000014177	MTREX	100	82.650	Cebus_capucinus
ENSORLG00020006329	mtrex	100	82.364	ENSCATG00000042153	MTREX	100	82.555	Cercocebus_atys
ENSORLG00020006329	mtrex	100	82.459	ENSCLAG00000006622	MTREX	100	82.555	Chinchilla_lanigera
ENSORLG00020006329	mtrex	100	78.612	ENSCSAG00000016445	MTREX	100	78.802	Chlorocebus_sabaeus
ENSORLG00020006329	mtrex	61	97.222	ENSCHOG00000010936	-	70	97.222	Choloepus_hoffmanni
ENSORLG00020006329	mtrex	100	83.654	ENSCPBG00000026551	MTREX	94	83.654	Chrysemys_picta_bellii
ENSORLG00020006329	mtrex	99	65.197	ENSCING00000003239	-	99	65.197	Ciona_intestinalis
ENSORLG00020006329	mtrex	99	64.245	ENSCSAVG00000009304	-	100	68.884	Ciona_savignyi
ENSORLG00020006329	mtrex	100	82.459	ENSCANG00000035770	MTREX	100	82.459	Colobus_angolensis_palliatus
ENSORLG00020006329	mtrex	100	82.667	ENSCGRG00001024680	Mtrex	100	82.667	Cricetulus_griseus_chok1gshd
ENSORLG00020006329	mtrex	100	82.667	ENSCGRG00000000307	Mtrex	100	82.667	Cricetulus_griseus_crigri
ENSORLG00020006329	mtrex	100	91.023	ENSCSEG00000018621	mtrex	98	91.023	Cynoglossus_semilaevis
ENSORLG00020006329	mtrex	100	93.346	ENSCVAG00000004556	mtrex	100	93.346	Cyprinodon_variegatus
ENSORLG00020006329	mtrex	100	86.416	ENSDARG00000013457	mtrex	100	86.416	Danio_rerio
ENSORLG00020006329	mtrex	100	82.303	ENSDNOG00000015375	MTREX	100	82.303	Dasypus_novemcinctus
ENSORLG00020006329	mtrex	100	82.139	ENSDORG00000006782	Mtrex	100	82.163	Dipodomys_ordii
ENSORLG00020006329	mtrex	99	61.575	FBgn0001986	Mtr4	99	61.654	Drosophila_melanogaster
ENSORLG00020006329	mtrex	90	66.977	ENSETEG00000000727	MTREX	90	66.977	Echinops_telfairi
ENSORLG00020006329	mtrex	99	72.517	ENSEBUG00000012869	mtrex	99	72.517	Eptatretus_burgeri
ENSORLG00020006329	mtrex	100	82.617	ENSEASG00005013270	MTREX	100	82.745	Equus_asinus_asinus
ENSORLG00020006329	mtrex	100	82.713	ENSECAG00000023723	MTREX	100	88.372	Equus_caballus
ENSORLG00020006329	mtrex	98	74.854	ENSEEUG00000000527	MTREX	100	74.854	Erinaceus_europaeus
ENSORLG00020006329	mtrex	98	87.398	ENSELUG00000004898	mtrex	100	90.861	Esox_lucius
ENSORLG00020006329	mtrex	100	82.745	ENSFCAG00000010575	MTREX	100	82.745	Felis_catus
ENSORLG00020006329	mtrex	100	81.906	ENSFALG00000010850	MTREX	100	81.809	Ficedula_albicollis
ENSORLG00020006329	mtrex	100	82.235	ENSFDAG00000011199	MTREX	100	82.235	Fukomys_damarensis
ENSORLG00020006329	mtrex	100	91.996	ENSFHEG00000023014	mtrex	100	88.580	Fundulus_heteroclitus
ENSORLG00020006329	mtrex	100	84.474	ENSGMOG00000014702	mtrex	100	84.860	Gadus_morhua
ENSORLG00020006329	mtrex	100	83.141	ENSGALG00000014709	MTREX	86	83.141	Gallus_gallus
ENSORLG00020006329	mtrex	100	92.478	ENSGAFG00000012425	mtrex	100	92.478	Gambusia_affinis
ENSORLG00020006329	mtrex	100	87.066	ENSGACG00000016260	mtrex	99	91.513	Gasterosteus_aculeatus
ENSORLG00020006329	mtrex	100	83.269	ENSGAGG00000020036	MTREX	100	83.573	Gopherus_agassizii
ENSORLG00020006329	mtrex	100	82.269	ENSGGOG00000001867	MTREX	100	82.459	Gorilla_gorilla
ENSORLG00020006329	mtrex	100	92.575	ENSHBUG00000006229	mtrex	100	92.478	Haplochromis_burtoni
ENSORLG00020006329	mtrex	100	82.235	ENSHGLG00000019445	SKIV2L2	100	82.235	Heterocephalus_glaber_female
ENSORLG00020006329	mtrex	100	82.235	ENSHGLG00100011833	SKIV2L2	100	82.235	Heterocephalus_glaber_male
ENSORLG00020006329	mtrex	94	89.741	ENSHCOG00000019995	mtrex	100	89.399	Hippocampus_comes
ENSORLG00020006329	mtrex	100	85.645	ENSIPUG00000024348	skiv2l2	100	85.453	Ictalurus_punctatus
ENSORLG00020006329	mtrex	100	82.398	ENSSTOG00000010802	MTREX	100	82.588	Ictidomys_tridecemlineatus
ENSORLG00020006329	mtrex	100	77.885	ENSJJAG00000020975	Mtrex	100	77.778	Jaculus_jaculus
ENSORLG00020006329	mtrex	100	92.671	ENSKMAG00000012642	mtrex	100	92.671	Kryptolebias_marmoratus
ENSORLG00020006329	mtrex	100	92.575	ENSLBEG00000019367	mtrex	100	92.575	Labrus_bergylta
ENSORLG00020006329	mtrex	100	83.062	ENSLACG00000009075	MTREX	100	83.062	Latimeria_chalumnae
ENSORLG00020006329	mtrex	100	85.385	ENSLOCG00000010186	mtrex	100	85.096	Lepisosteus_oculatus
ENSORLG00020006329	mtrex	99	80.306	ENSLAFG00000010497	MTREX	100	80.439	Loxodonta_africana
ENSORLG00020006329	mtrex	100	82.364	ENSMFAG00000031610	MTREX	100	82.555	Macaca_fascicularis
ENSORLG00020006329	mtrex	100	82.431	ENSMMUG00000010379	MTREX	100	82.621	Macaca_mulatta
ENSORLG00020006329	mtrex	100	82.364	ENSMNEG00000032746	MTREX	100	82.555	Macaca_nemestrina
ENSORLG00020006329	mtrex	100	82.364	ENSMLEG00000041051	MTREX	100	82.555	Mandrillus_leucophaeus
ENSORLG00020006329	mtrex	98	92.646	ENSMAMG00000016753	mtrex	98	94.064	Mastacembelus_armatus
ENSORLG00020006329	mtrex	100	92.575	ENSMZEG00005000414	mtrex	100	92.478	Maylandia_zebra
ENSORLG00020006329	mtrex	95	61.794	ENSMGAG00000003980	MTREX	99	61.593	Meleagris_gallopavo
ENSORLG00020006329	mtrex	100	82.667	ENSMAUG00000010727	Mtrex	100	82.667	Mesocricetus_auratus
ENSORLG00020006329	mtrex	100	82.650	ENSMICG00000012779	MTREX	100	82.841	Microcebus_murinus
ENSORLG00020006329	mtrex	100	82.426	ENSMOCG00000019886	Mtrex	100	82.555	Microtus_ochrogaster
ENSORLG00020006329	mtrex	98	92.167	ENSMMOG00000002476	mtrex	98	92.167	Mola_mola
ENSORLG00020006329	mtrex	100	83.269	ENSMODG00000019494	MTREX	100	83.365	Monodelphis_domestica
ENSORLG00020006329	mtrex	99	86.468	ENSMALG00000002917	mtrex	99	89.070	Monopterus_albus
ENSORLG00020006329	mtrex	100	82.269	MGP_CAROLIEiJ_G0018896	Mtrex	100	82.269	Mus_caroli
ENSORLG00020006329	mtrex	100	82.235	ENSMUSG00000016018	Mtrex	100	82.364	Mus_musculus
ENSORLG00020006329	mtrex	100	82.139	MGP_PahariEiJ_G0015967	Mtrex	100	82.269	Mus_pahari
ENSORLG00020006329	mtrex	100	82.235	MGP_SPRETEiJ_G0019775	Mtrex	100	82.364	Mus_spretus
ENSORLG00020006329	mtrex	100	82.555	ENSMPUG00000007619	MTREX	100	82.745	Mustela_putorius_furo
ENSORLG00020006329	mtrex	100	82.000	ENSMLUG00000001152	MTREX	100	82.095	Myotis_lucifugus
ENSORLG00020006329	mtrex	100	82.303	ENSNGAG00000011938	Mtrex	100	82.526	Nannospalax_galili
ENSORLG00020006329	mtrex	100	92.478	ENSNBRG00000011293	mtrex	100	92.382	Neolamprologus_brichardi
ENSORLG00020006329	mtrex	100	78.497	ENSNLEG00000001494	MTREX	100	78.497	Nomascus_leucogenys
ENSORLG00020006329	mtrex	83	96.078	ENSMEUG00000006496	-	83	96.078	Notamacropus_eugenii
ENSORLG00020006329	mtrex	100	70.115	ENSOPRG00000008009	MTREX	100	70.115	Ochotona_princeps
ENSORLG00020006329	mtrex	100	81.792	ENSODEG00000017234	MTREX	100	81.983	Octodon_degus
ENSORLG00020006329	mtrex	100	92.189	ENSONIG00000007587	mtrex	100	92.093	Oreochromis_niloticus
ENSORLG00020006329	mtrex	52	83.721	ENSOANG00000004885	-	99	83.721	Ornithorhynchus_anatinus
ENSORLG00020006329	mtrex	100	82.808	ENSOCUG00000004463	MTREX	100	82.808	Oryctolagus_cuniculus
ENSORLG00020006329	mtrex	100	99.807	ENSORLG00000005443	mtrex	100	99.807	Oryzias_latipes
ENSORLG00020006329	mtrex	100	99.710	ENSORLG00015012924	mtrex	100	99.710	Oryzias_latipes_hsok
ENSORLG00020006329	mtrex	100	98.075	ENSOMEG00000008825	mtrex	100	98.075	Oryzias_melastigma
ENSORLG00020006329	mtrex	100	82.207	ENSOGAG00000002886	MTREX	100	82.398	Otolemur_garnettii
ENSORLG00020006329	mtrex	100	82.129	ENSOARG00000007764	MTREX	100	82.224	Ovis_aries
ENSORLG00020006329	mtrex	100	82.269	ENSPPAG00000039291	MTREX	100	82.459	Pan_paniscus
ENSORLG00020006329	mtrex	100	82.745	ENSPPRG00000019701	MTREX	100	82.745	Panthera_pardus
ENSORLG00020006329	mtrex	100	81.316	ENSPTIG00000009313	MTREX	100	81.316	Panthera_tigris_altaica
ENSORLG00020006329	mtrex	100	82.269	ENSPTRG00000016878	MTREX	100	82.459	Pan_troglodytes
ENSORLG00020006329	mtrex	100	82.269	ENSPANG00000009697	MTREX	100	82.459	Papio_anubis
ENSORLG00020006329	mtrex	100	85.632	ENSPKIG00000020833	mtrex	100	85.632	Paramormyrops_kingsleyae
ENSORLG00020006329	mtrex	100	83.173	ENSPSIG00000012150	MTREX	100	83.142	Pelodiscus_sinensis
ENSORLG00020006329	mtrex	100	87.861	ENSPMGG00000002582	mtrex	100	87.861	Periophthalmus_magnuspinnatus
ENSORLG00020006329	mtrex	95	64.980	ENSPMAG00000009668	mtrex	100	64.914	Petromyzon_marinus
ENSORLG00020006329	mtrex	94	87.393	ENSPCIG00000024730	MTREX	100	87.500	Phascolarctos_cinereus
ENSORLG00020006329	mtrex	77	94.689	ENSPFOG00000003141	mtrex	100	94.797	Poecilia_formosa
ENSORLG00020006329	mtrex	100	92.960	ENSPLAG00000021311	mtrex	100	92.960	Poecilia_latipinna
ENSORLG00020006329	mtrex	95	93.038	ENSPMEG00000010597	mtrex	99	93.417	Poecilia_mexicana
ENSORLG00020006329	mtrex	100	92.864	ENSPREG00000003089	mtrex	100	92.864	Poecilia_reticulata
ENSORLG00020006329	mtrex	94	87.128	ENSPPYG00000015469	MTREX	98	82.171	Pongo_abelii
ENSORLG00020006329	mtrex	94	72.558	ENSPCAG00000013120	MTREX	94	72.558	Procavia_capensis
ENSORLG00020006329	mtrex	99	76.883	ENSPCOG00000018092	MTREX	100	76.883	Propithecus_coquereli
ENSORLG00020006329	mtrex	100	82.459	ENSPVAG00000002445	MTREX	100	82.650	Pteropus_vampyrus
ENSORLG00020006329	mtrex	100	92.478	ENSPNYG00000006164	mtrex	100	92.382	Pundamilia_nyererei
ENSORLG00020006329	mtrex	100	86.994	ENSPNAG00000008794	mtrex	100	87.187	Pygocentrus_nattereri
ENSORLG00020006329	mtrex	94	87.021	ENSRNOG00000010125	Mtrex	97	81.950	Rattus_norvegicus
ENSORLG00020006329	mtrex	100	80.553	ENSRBIG00000034930	MTREX	100	80.744	Rhinopithecus_bieti
ENSORLG00020006329	mtrex	100	82.269	ENSRROG00000039895	MTREX	100	82.459	Rhinopithecus_roxellana
ENSORLG00020006329	mtrex	94	53.568	YJL050W	MTR4	92	53.421	Saccharomyces_cerevisiae
ENSORLG00020006329	mtrex	100	82.459	ENSSBOG00000026693	MTREX	100	82.650	Saimiri_boliviensis_boliviensis
ENSORLG00020006329	mtrex	96	85.170	ENSSHAG00000004600	MTREX	99	85.170	Sarcophilus_harrisii
ENSORLG00020006329	mtrex	100	86.635	ENSSFOG00015014355	skiv2l2	100	86.635	Scleropages_formosus
ENSORLG00020006329	mtrex	100	91.707	ENSSMAG00000007572	mtrex	100	91.707	Scophthalmus_maximus
ENSORLG00020006329	mtrex	100	92.671	ENSSDUG00000023789	mtrex	100	92.671	Seriola_dumerili
ENSORLG00020006329	mtrex	100	92.768	ENSSLDG00000006301	mtrex	100	92.768	Seriola_lalandi_dorsalis
ENSORLG00020006329	mtrex	94	86.915	ENSSARG00000008387	MTREX	100	81.030	Sorex_araneus
ENSORLG00020006329	mtrex	89	85.406	ENSSPUG00000007071	MTREX	96	85.406	Sphenodon_punctatus
ENSORLG00020006329	mtrex	100	87.777	ENSSPAG00000011319	mtrex	98	89.332	Stegastes_partitus
ENSORLG00020006329	mtrex	100	82.605	ENSSSCG00000016911	MTREX	100	82.795	Sus_scrofa
ENSORLG00020006329	mtrex	100	81.460	ENSTGUG00000002480	MTREX	100	81.460	Taeniopygia_guttata
ENSORLG00020006329	mtrex	100	90.164	ENSTRUG00000014571	mtrex	100	90.164	Takifugu_rubripes
ENSORLG00020006329	mtrex	93	75.728	ENSTBEG00000007769	MTREX	100	68.316	Tupaia_belangeri
ENSORLG00020006329	mtrex	100	82.571	ENSTTRG00000008678	MTREX	100	82.571	Tursiops_truncatus
ENSORLG00020006329	mtrex	100	82.459	ENSUAMG00000023061	MTREX	100	82.555	Ursus_americanus
ENSORLG00020006329	mtrex	100	82.596	ENSUMAG00000009373	MTREX	99	88.343	Ursus_maritimus
ENSORLG00020006329	mtrex	100	73.689	ENSVPAG00000011174	MTREX	100	73.499	Vicugna_pacos
ENSORLG00020006329	mtrex	100	82.555	ENSVVUG00000021337	MTREX	100	82.650	Vulpes_vulpes
ENSORLG00020006329	mtrex	100	84.601	ENSXETG00000032798	MTREX	100	84.601	Xenopus_tropicalis
ENSORLG00020006329	mtrex	100	92.478	ENSXMAG00000004799	mtrex	100	92.478	Xiphophorus_maculatus