EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020006554 (Gene tree)
Gene ID: -
Gene Symbol: rad54l
Alias: -
Full Name: RAD54 like
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 13171 bases
Position: chr4:5366091-5379261
Accession: ZDB-GENE-040426-968
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020005707	ResIII	PF04851.15	4.1e-08	1	1
ENSORLP00020005690	ResIII	PF04851.15	4.7e-08	1	1
ENSORLP00020005690	DEAD	PF00270.29	5.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020005857	-	3486	-	ENSORLP00020005690	733 (aa)	-	-
ENSORLT00020005820	-	3549	-	ENSORLP00020005707	682 (aa)	-	-

Gene Model

Click here to download ENSORLG00020006554's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020006554's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020006554	rad54l	82	37.198	ENSORLG00020003952	hells	68	37.198
ENSORLG00020006554	rad54l	89	45.511	ENSORLG00020012171	rad54b	98	45.511

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020006554	rad54l	99	81.378	ENSG00000085999	RAD54L	100	84.000	Homo_sapiens
ENSORLG00020006554	rad54l	99	87.021	ENSAPOG00000011643	rad54l	99	84.783	Acanthochromis_polyacanthus
ENSORLG00020006554	rad54l	99	80.499	ENSAMEG00000013902	RAD54L	99	77.419	Ailuropoda_melanoleuca
ENSORLG00020006554	rad54l	99	86.892	ENSACIG00000001939	rad54l	99	83.853	Amphilophus_citrinellus
ENSORLG00020006554	rad54l	99	90.399	ENSAOCG00000017576	rad54l	99	87.772	Amphiprion_ocellaris
ENSORLG00020006554	rad54l	99	90.103	ENSAPEG00000020658	rad54l	98	88.152	Amphiprion_percula
ENSORLG00020006554	rad54l	99	89.706	ENSATEG00000006767	rad54l	99	88.571	Anabas_testudineus
ENSORLG00020006554	rad54l	99	82.673	ENSAPLG00000006389	RAD54L	99	82.302	Anas_platyrhynchos
ENSORLG00020006554	rad54l	99	83.407	ENSACAG00000002312	RAD54L	100	80.108	Anolis_carolinensis
ENSORLG00020006554	rad54l	99	81.672	ENSANAG00000035439	RAD54L	99	78.792	Aotus_nancymaae
ENSORLG00020006554	rad54l	99	85.588	ENSACLG00000018711	rad54l	99	82.544	Astatotilapia_calliptera
ENSORLG00020006554	rad54l	99	87.812	ENSAMXG00000012777	rad54l	99	85.155	Astyanax_mexicanus
ENSORLG00020006554	rad54l	99	81.525	ENSBTAG00000019901	RAD54L	99	78.686	Bos_taurus
ENSORLG00020006554	rad54l	99	58.763	WBGene00004298	rad-54	88	57.163	Caenorhabditis_elegans
ENSORLG00020006554	rad54l	99	79.416	ENSCJAG00000021080	RAD54L	95	76.707	Callithrix_jacchus
ENSORLG00020006554	rad54l	99	80.735	ENSCAFG00000004272	RAD54L	99	77.450	Canis_familiaris
ENSORLG00020006554	rad54l	99	80.735	ENSCAFG00020015066	RAD54L	99	77.419	Canis_lupus_dingo
ENSORLG00020006554	rad54l	99	81.525	ENSCHIG00000020118	RAD54L	99	78.523	Capra_hircus
ENSORLG00020006554	rad54l	99	80.938	ENSTSYG00000002032	RAD54L	99	77.748	Carlito_syrichta
ENSORLG00020006554	rad54l	99	81.232	ENSCPOG00000006768	RAD54L	99	78.658	Cavia_porcellus
ENSORLG00020006554	rad54l	99	81.672	ENSCCAG00000025783	RAD54L	99	78.792	Cebus_capucinus
ENSORLG00020006554	rad54l	99	81.965	ENSCATG00000030589	RAD54L	99	79.060	Cercocebus_atys
ENSORLG00020006554	rad54l	99	81.965	ENSCLAG00000004645	RAD54L	99	79.195	Chinchilla_lanigera
ENSORLG00020006554	rad54l	99	81.818	ENSCSAG00000001229	RAD54L	99	78.926	Chlorocebus_sabaeus
ENSORLG00020006554	rad54l	99	82.966	ENSCPBG00000005675	RAD54L	100	80.108	Chrysemys_picta_bellii
ENSORLG00020006554	rad54l	99	66.569	ENSCING00000024456	-	99	62.663	Ciona_intestinalis
ENSORLG00020006554	rad54l	99	67.208	ENSCSAVG00000010859	-	99	62.861	Ciona_savignyi
ENSORLG00020006554	rad54l	99	81.965	ENSCANG00000034891	RAD54L	99	78.926	Colobus_angolensis_palliatus
ENSORLG00020006554	rad54l	99	81.232	ENSCGRG00001014807	Rad54l	99	78.571	Cricetulus_griseus_chok1gshd
ENSORLG00020006554	rad54l	99	81.232	ENSCGRG00000016038	Rad54l	99	78.571	Cricetulus_griseus_crigri
ENSORLG00020006554	rad54l	99	88.399	ENSCSEG00000001983	rad54l	99	85.246	Cynoglossus_semilaevis
ENSORLG00020006554	rad54l	94	87.952	ENSCVAG00000019561	rad54l	99	87.952	Cyprinodon_variegatus
ENSORLG00020006554	rad54l	99	85.609	ENSDARG00000018623	rad54l	99	83.175	Danio_rerio
ENSORLG00020006554	rad54l	99	80.938	ENSDNOG00000003395	RAD54L	99	77.882	Dasypus_novemcinctus
ENSORLG00020006554	rad54l	99	76.720	ENSDORG00000002632	Rad54l	99	72.090	Dipodomys_ordii
ENSORLG00020006554	rad54l	99	56.828	FBgn0002989	okr	95	54.400	Drosophila_melanogaster
ENSORLG00020006554	rad54l	75	79.747	ENSETEG00000000550	RAD54L	78	77.049	Echinops_telfairi
ENSORLG00020006554	rad54l	99	81.085	ENSEASG00005004511	RAD54L	96	81.315	Equus_asinus_asinus
ENSORLG00020006554	rad54l	99	81.630	ENSECAG00000008760	RAD54L	99	78.255	Equus_caballus
ENSORLG00020006554	rad54l	99	81.630	ENSEEUG00000008113	RAD54L	99	75.973	Erinaceus_europaeus
ENSORLG00020006554	rad54l	99	88.563	ENSELUG00000002295	rad54l	99	85.389	Esox_lucius
ENSORLG00020006554	rad54l	99	80.294	ENSFCAG00000003444	RAD54L	99	76.644	Felis_catus
ENSORLG00020006554	rad54l	99	82.526	ENSFALG00000009480	RAD54L	100	79.570	Ficedula_albicollis
ENSORLG00020006554	rad54l	99	81.232	ENSFDAG00000007806	RAD54L	99	78.255	Fukomys_damarensis
ENSORLG00020006554	rad54l	64	84.562	ENSFHEG00000009824	rad54l	83	79.210	Fundulus_heteroclitus
ENSORLG00020006554	rad54l	99	85.441	ENSGMOG00000014568	rad54l	99	83.220	Gadus_morhua
ENSORLG00020006554	rad54l	100	82.991	ENSGALG00000010356	RAD54L	92	80.350	Gallus_gallus
ENSORLG00020006554	rad54l	90	86.829	ENSGAFG00000011110	rad54l	100	83.210	Gambusia_affinis
ENSORLG00020006554	rad54l	99	88.954	ENSGACG00000003111	rad54l	97	85.811	Gasterosteus_aculeatus
ENSORLG00020006554	rad54l	99	82.085	ENSGAGG00000014089	RAD54L	96	79.273	Gopherus_agassizii
ENSORLG00020006554	rad54l	99	81.525	ENSGGOG00000010602	RAD54L	99	78.658	Gorilla_gorilla
ENSORLG00020006554	rad54l	99	85.735	ENSHBUG00000007793	rad54l	99	82.815	Haplochromis_burtoni
ENSORLG00020006554	rad54l	99	81.672	ENSHGLG00000000753	RAD54L	99	78.926	Heterocephalus_glaber_female
ENSORLG00020006554	rad54l	99	81.672	ENSHGLG00100016987	RAD54L	99	78.792	Heterocephalus_glaber_male
ENSORLG00020006554	rad54l	99	86.490	ENSIPUG00000015999	rad54l	99	86.167	Ictalurus_punctatus
ENSORLG00020006554	rad54l	99	80.938	ENSSTOG00000029125	RAD54L	99	77.852	Ictidomys_tridecemlineatus
ENSORLG00020006554	rad54l	96	69.453	ENSJJAG00000000235	-	99	65.591	Jaculus_jaculus
ENSORLG00020006554	rad54l	99	87.888	ENSKMAG00000009944	rad54l	99	84.918	Kryptolebias_marmoratus
ENSORLG00020006554	rad54l	99	89.732	ENSLBEG00000014617	rad54l	97	89.732	Labrus_bergylta
ENSORLG00020006554	rad54l	99	86.765	ENSLOCG00000004144	rad54l	100	83.952	Lepisosteus_oculatus
ENSORLG00020006554	rad54l	99	80.792	ENSLAFG00000007583	RAD54L	99	78.360	Loxodonta_africana
ENSORLG00020006554	rad54l	99	81.965	ENSMFAG00000031241	RAD54L	99	79.060	Macaca_fascicularis
ENSORLG00020006554	rad54l	99	81.965	ENSMMUG00000011568	RAD54L	99	79.060	Macaca_mulatta
ENSORLG00020006554	rad54l	99	81.818	ENSMNEG00000038562	RAD54L	99	78.926	Macaca_nemestrina
ENSORLG00020006554	rad54l	99	81.965	ENSMLEG00000038145	RAD54L	99	79.060	Mandrillus_leucophaeus
ENSORLG00020006554	rad54l	99	88.018	ENSMAMG00000022180	rad54l	99	88.018	Mastacembelus_armatus
ENSORLG00020006554	rad54l	99	85.441	ENSMZEG00005018081	rad54l	99	82.409	Maylandia_zebra
ENSORLG00020006554	rad54l	100	82.845	ENSMGAG00000010634	RAD54L	99	80.189	Meleagris_gallopavo
ENSORLG00020006554	rad54l	99	81.378	ENSMAUG00000020076	Rad54l	99	78.841	Mesocricetus_auratus
ENSORLG00020006554	rad54l	99	81.525	ENSMICG00000003266	RAD54L	99	78.658	Microcebus_murinus
ENSORLG00020006554	rad54l	99	81.818	ENSMOCG00000001778	Rad54l	99	79.111	Microtus_ochrogaster
ENSORLG00020006554	rad54l	99	86.156	ENSMALG00000021148	rad54l	99	82.861	Monopterus_albus
ENSORLG00020006554	rad54l	96	80.851	MGP_CAROLIEiJ_G0026325	Rad54l	99	74.151	Mus_caroli
ENSORLG00020006554	rad54l	99	81.232	ENSMUSG00000028702	Rad54l	99	78.523	Mus_musculus
ENSORLG00020006554	rad54l	99	81.232	MGP_PahariEiJ_G0028657	Rad54l	99	78.629	Mus_pahari
ENSORLG00020006554	rad54l	99	81.378	MGP_SPRETEiJ_G0027297	Rad54l	99	78.658	Mus_spretus
ENSORLG00020006554	rad54l	99	81.259	ENSMPUG00000012883	RAD54L	99	77.987	Mustela_putorius_furo
ENSORLG00020006554	rad54l	99	81.378	ENSMLUG00000003763	RAD54L	99	78.360	Myotis_lucifugus
ENSORLG00020006554	rad54l	99	81.085	ENSNGAG00000024213	Rad54l	99	77.852	Nannospalax_galili
ENSORLG00020006554	rad54l	99	81.672	ENSNLEG00000016548	RAD54L	99	78.658	Nomascus_leucogenys
ENSORLG00020006554	rad54l	99	79.792	ENSMEUG00000006793	RAD54L	99	79.911	Notamacropus_eugenii
ENSORLG00020006554	rad54l	90	82.578	ENSOPRG00000016016	RAD54L	90	82.578	Ochotona_princeps
ENSORLG00020006554	rad54l	99	81.672	ENSODEG00000008519	RAD54L	99	78.792	Octodon_degus
ENSORLG00020006554	rad54l	99	85.735	ENSONIG00000007659	rad54l	99	82.679	Oreochromis_niloticus
ENSORLG00020006554	rad54l	99	81.672	ENSOCUG00000005229	RAD54L	99	78.418	Oryctolagus_cuniculus
ENSORLG00020006554	rad54l	99	99.853	ENSORLG00000002958	rad54l	99	99.590	Oryzias_latipes
ENSORLG00020006554	rad54l	99	100.000	ENSORLG00015002907	rad54l	99	99.727	Oryzias_latipes_hsok
ENSORLG00020006554	rad54l	99	98.088	ENSOMEG00000007770	rad54l	99	96.995	Oryzias_melastigma
ENSORLG00020006554	rad54l	99	81.552	ENSOARG00000002264	RAD54L	99	78.581	Ovis_aries
ENSORLG00020006554	rad54l	99	81.525	ENSPPAG00000031222	RAD54L	99	78.658	Pan_paniscus
ENSORLG00020006554	rad54l	99	80.294	ENSPPRG00000010317	RAD54L	99	76.644	Panthera_pardus
ENSORLG00020006554	rad54l	99	80.294	ENSPTIG00000012200	RAD54L	99	76.644	Panthera_tigris_altaica
ENSORLG00020006554	rad54l	99	81.525	ENSPTRG00000000689	RAD54L	99	78.658	Pan_troglodytes
ENSORLG00020006554	rad54l	99	81.965	ENSPANG00000016295	RAD54L	99	79.060	Papio_anubis
ENSORLG00020006554	rad54l	98	81.818	ENSPKIG00000016172	rad54l	99	78.184	Paramormyrops_kingsleyae
ENSORLG00020006554	rad54l	99	83.407	ENSPSIG00000003258	RAD54L	100	80.272	Pelodiscus_sinensis
ENSORLG00020006554	rad54l	99	82.743	ENSPMGG00000016335	rad54l	99	79.404	Periophthalmus_magnuspinnatus
ENSORLG00020006554	rad54l	99	81.232	ENSPEMG00000011422	Rad54l	99	78.706	Peromyscus_maniculatus_bairdii
ENSORLG00020006554	rad54l	99	73.167	ENSPMAG00000007719	rad54l	99	70.415	Petromyzon_marinus
ENSORLG00020006554	rad54l	99	82.916	ENSPCIG00000029032	RAD54L	99	79.408	Phascolarctos_cinereus
ENSORLG00020006554	rad54l	90	87.480	ENSPFOG00000013732	rad54l	99	86.299	Poecilia_formosa
ENSORLG00020006554	rad54l	89	84.578	ENSPLAG00000023416	rad54l	99	84.578	Poecilia_latipinna
ENSORLG00020006554	rad54l	90	87.480	ENSPMEG00000008299	rad54l	100	83.804	Poecilia_mexicana
ENSORLG00020006554	rad54l	99	86.726	ENSPREG00000019955	rad54l	99	83.198	Poecilia_reticulata
ENSORLG00020006554	rad54l	92	81.325	ENSPPYG00000001398	RAD54L	99	77.540	Pongo_abelii
ENSORLG00020006554	rad54l	79	82.039	ENSPCAG00000005323	RAD54L	80	82.039	Procavia_capensis
ENSORLG00020006554	rad54l	99	81.232	ENSPCOG00000015423	RAD54L	99	78.523	Propithecus_coquereli
ENSORLG00020006554	rad54l	99	83.502	ENSPNYG00000002942	rad54l	96	83.502	Pundamilia_nyererei
ENSORLG00020006554	rad54l	99	86.637	ENSPNAG00000012483	rad54l	99	83.919	Pygocentrus_nattereri
ENSORLG00020006554	rad54l	99	81.085	ENSRNOG00000013148	Rad54l	99	78.389	Rattus_norvegicus
ENSORLG00020006554	rad54l	99	81.965	ENSRBIG00000043495	RAD54L	99	79.060	Rhinopithecus_bieti
ENSORLG00020006554	rad54l	99	81.965	ENSRROG00000020844	RAD54L	99	79.060	Rhinopithecus_roxellana
ENSORLG00020006554	rad54l	88	49.071	YGL163C	RAD54	71	49.309	Saccharomyces_cerevisiae
ENSORLG00020006554	rad54l	99	81.672	ENSSBOG00000024672	RAD54L	99	78.792	Saimiri_boliviensis_boliviensis
ENSORLG00020006554	rad54l	99	82.991	ENSSHAG00000000110	RAD54L	99	79.839	Sarcophilus_harrisii
ENSORLG00020006554	rad54l	99	89.706	ENSSDUG00000019147	rad54l	99	86.604	Seriola_dumerili
ENSORLG00020006554	rad54l	99	89.706	ENSSLDG00000012330	rad54l	99	86.874	Seriola_lalandi_dorsalis
ENSORLG00020006554	rad54l	81	83.183	ENSSARG00000006689	RAD54L	100	76.404	Sorex_araneus
ENSORLG00020006554	rad54l	99	89.381	ENSSPAG00000011016	rad54l	99	86.296	Stegastes_partitus
ENSORLG00020006554	rad54l	99	81.818	ENSSSCG00000003905	RAD54L	99	78.658	Sus_scrofa
ENSORLG00020006554	rad54l	99	82.379	ENSTGUG00000008233	RAD54L	100	79.301	Taeniopygia_guttata
ENSORLG00020006554	rad54l	99	87.537	ENSTRUG00000008410	rad54l	95	87.537	Takifugu_rubripes
ENSORLG00020006554	rad54l	99	86.854	ENSTNIG00000004716	rad54l	99	82.456	Tetraodon_nigroviridis
ENSORLG00020006554	rad54l	99	78.370	ENSTTRG00000006315	RAD54L	99	73.020	Tursiops_truncatus
ENSORLG00020006554	rad54l	99	80.499	ENSUAMG00000011824	RAD54L	99	77.432	Ursus_americanus
ENSORLG00020006554	rad54l	99	79.179	ENSUMAG00000023603	RAD54L	99	76.351	Ursus_maritimus
ENSORLG00020006554	rad54l	99	80.882	ENSVVUG00000007201	RAD54L	99	77.584	Vulpes_vulpes
ENSORLG00020006554	rad54l	99	75.988	ENSXETG00000004369	rad54l	99	75.035	Xenopus_tropicalis
ENSORLG00020006554	rad54l	51	88.000	ENSXCOG00000016028	rad54l	81	85.870	Xiphophorus_couchianus