EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020006582 (Gene tree)
Gene ID: -
Gene Symbol: hnrnpa1a
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein A1
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 5126 bases
Position: chr7:12666498-12671623
Accession: 101174914
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020005745	RRM_1	PF00076.22	1e-36	1	2
ENSORLP00020005745	RRM_1	PF00076.22	1e-36	2	2
ENSORLP00020005722	RRM_1	PF00076.22	4.1e-36	1	2
ENSORLP00020005722	RRM_1	PF00076.22	4.1e-36	2	2
ENSORLP00020024906	RRM_1	PF00076.22	4.1e-36	1	2
ENSORLP00020024906	RRM_1	PF00076.22	4.1e-36	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020005806	-	1954	-	ENSORLP00020005722	329 (aa)	XP_004070518	H2LVA9
ENSORLT00020005761	-	645	-	ENSORLP00020005745	214 (aa)	-	-
ENSORLT00020005767	-	1361	-	ENSORLP00020024906	329 (aa)	XP_004070518	H2LVA9

Gene Model

Click here to download ENSORLG00020006582's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020006582's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020006582	hnrnpa1a	81	50.633	ENSORLG00020007084	-	77	49.701
ENSORLG00020006582	hnrnpa1a	84	41.667	ENSORLG00020008266	MSI1	56	42.529
ENSORLG00020006582	hnrnpa1a	91	39.691	ENSORLG00020021556	msi2a	57	41.279
ENSORLG00020006582	hnrnpa1a	83	51.724	ENSORLG00020007505	-	58	51.724
ENSORLG00020006582	hnrnpa1a	79	50.602	ENSORLG00020006029	-	58	50.602
ENSORLG00020006582	hnrnpa1a	80	41.176	ENSORLG00020014780	hnrnpd	51	39.891
ENSORLG00020006582	hnrnpa1a	84	51.111	ENSORLG00020008203	-	60	51.111
ENSORLG00020006582	hnrnpa1a	91	81.959	ENSORLG00020020788	hnrnpa3	90	65.147
ENSORLG00020006582	hnrnpa1a	84	51.955	ENSORLG00020022498	-	85	51.667
ENSORLG00020006582	hnrnpa1a	80	38.824	ENSORLG00020012133	hnrnpaba	52	37.778
ENSORLG00020006582	hnrnpa1a	81	55.556	ENSORLG00020007171	-	95	55.556
ENSORLG00020006582	hnrnpa1a	83	52.023	ENSORLG00020007109	-	58	50.549
ENSORLG00020006582	hnrnpa1a	90	51.042	ENSORLG00020022487	-	62	53.714
ENSORLG00020006582	hnrnpa1a	84	51.111	ENSORLG00020006043	-	61	50.829
ENSORLG00020006582	hnrnpa1a	69	50.685	ENSORLG00020016909	cirbpa	50	50.685
ENSORLG00020006582	hnrnpa1a	84	39.306	ENSORLG00020007776	hnrnpabb	56	37.705

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020006582	hnrnpa1a	98	93.780	ENSAPOG00000019369	-	90	88.372	Acanthochromis_polyacanthus
ENSORLG00020006582	hnrnpa1a	83	56.180	ENSACIG00000021815	-	87	56.180	Amphilophus_citrinellus
ENSORLG00020006582	hnrnpa1a	98	93.780	ENSAOCG00000005289	-	100	89.222	Amphiprion_ocellaris
ENSORLG00020006582	hnrnpa1a	98	93.780	ENSAPEG00000004179	-	100	89.222	Amphiprion_percula
ENSORLG00020006582	hnrnpa1a	100	92.920	ENSATEG00000022918	hnrnpa1a	100	92.920	Anabas_testudineus
ENSORLG00020006582	hnrnpa1a	81	60.127	ENSATEG00000003423	-	75	60.127	Anabas_testudineus
ENSORLG00020006582	hnrnpa1a	84	56.667	ENSACAG00000017109	-	57	55.376	Anolis_carolinensis
ENSORLG00020006582	hnrnpa1a	98	93.333	ENSACLG00000006940	-	91	89.836	Astatotilapia_calliptera
ENSORLG00020006582	hnrnpa1a	85	85.083	ENSAMXG00000006296	hnrnpa1a	88	58.967	Astyanax_mexicanus
ENSORLG00020006582	hnrnpa1a	82	63.636	ENSAMXG00000037730	-	85	54.795	Astyanax_mexicanus
ENSORLG00020006582	hnrnpa1a	98	87.264	ENSCSEG00000007589	hnrnpa1a	99	79.118	Cynoglossus_semilaevis
ENSORLG00020006582	hnrnpa1a	81	55.491	ENSCSEG00000014051	-	74	54.144	Cynoglossus_semilaevis
ENSORLG00020006582	hnrnpa1a	98	89.952	ENSCVAG00000012637	hnrnpa1a	90	81.967	Cyprinodon_variegatus
ENSORLG00020006582	hnrnpa1a	86	81.421	ENSDARG00000011020	hnrnpa1a	82	61.635	Danio_rerio
ENSORLG00020006582	hnrnpa1a	89	56.701	ENSDORG00000026425	-	79	48.000	Dipodomys_ordii
ENSORLG00020006582	hnrnpa1a	89	89.474	ENSELUG00000007372	-	51	90.710	Esox_lucius
ENSORLG00020006582	hnrnpa1a	85	60.989	ENSGMOG00000020353	-	95	60.989	Gadus_morhua
ENSORLG00020006582	hnrnpa1a	98	94.737	ENSGAFG00000007751	-	90	82.295	Gambusia_affinis
ENSORLG00020006582	hnrnpa1a	83	54.802	ENSGAFG00000016803	-	54	54.190	Gambusia_affinis
ENSORLG00020006582	hnrnpa1a	96	91.279	ENSGACG00000009435	-	87	80.755	Gasterosteus_aculeatus
ENSORLG00020006582	hnrnpa1a	98	93.333	ENSHBUG00000005647	hnrnpa1a	91	90.132	Haplochromis_burtoni
ENSORLG00020006582	hnrnpa1a	87	84.492	ENSIPUG00000022440	-	71	86.061	Ictalurus_punctatus
ENSORLG00020006582	hnrnpa1a	83	62.360	ENSIPUG00000001991	-	76	62.360	Ictalurus_punctatus
ENSORLG00020006582	hnrnpa1a	88	82.540	ENSIPUG00000002023	hnrnpa1a	76	86.286	Ictalurus_punctatus
ENSORLG00020006582	hnrnpa1a	98	95.694	ENSKMAG00000020859	-	89	89.369	Kryptolebias_marmoratus
ENSORLG00020006582	hnrnpa1a	98	89.100	ENSLBEG00000010010	hnrnpa1a	91	82.222	Labrus_bergylta
ENSORLG00020006582	hnrnpa1a	85	71.038	ENSMFAG00000028351	-	90	60.596	Macaca_fascicularis
ENSORLG00020006582	hnrnpa1a	98	95.215	ENSMAMG00000007606	-	95	91.743	Mastacembelus_armatus
ENSORLG00020006582	hnrnpa1a	98	93.333	ENSMZEG00005027173	hnrnpa1a	91	90.132	Maylandia_zebra
ENSORLG00020006582	hnrnpa1a	87	94.086	ENSMMOG00000008251	hnrnpa1a	91	87.727	Mola_mola
ENSORLG00020006582	hnrnpa1a	83	57.062	ENSMALG00000008886	-	86	57.062	Monopterus_albus
ENSORLG00020006582	hnrnpa1a	98	94.737	ENSMALG00000014091	hnrnpa1a	100	91.329	Monopterus_albus
ENSORLG00020006582	hnrnpa1a	87	58.824	ENSNBRG00000014469	-	82	60.227	Neolamprologus_brichardi
ENSORLG00020006582	hnrnpa1a	98	93.333	ENSNBRG00000018441	-	91	90.099	Neolamprologus_brichardi
ENSORLG00020006582	hnrnpa1a	82	53.179	ENSORLG00000029240	-	89	53.179	Oryzias_latipes
ENSORLG00020006582	hnrnpa1a	100	100.000	ENSORLG00000008001	-	100	100.000	Oryzias_latipes
ENSORLG00020006582	hnrnpa1a	100	99.696	ENSORLG00015022294	-	100	99.696	Oryzias_latipes_hsok
ENSORLG00020006582	hnrnpa1a	100	98.485	ENSOMEG00000015959	-	100	98.485	Oryzias_melastigma
ENSORLG00020006582	hnrnpa1a	83	58.427	ENSPMGG00000016392	-	93	58.101	Periophthalmus_magnuspinnatus
ENSORLG00020006582	hnrnpa1a	86	93.989	ENSPMGG00000011804	hnrnpa1a	67	95.604	Periophthalmus_magnuspinnatus
ENSORLG00020006582	hnrnpa1a	98	94.737	ENSPFOG00000001825	-	100	83.186	Poecilia_formosa
ENSORLG00020006582	hnrnpa1a	98	94.737	ENSPMEG00000002425	-	100	83.186	Poecilia_mexicana
ENSORLG00020006582	hnrnpa1a	87	58.824	ENSPNYG00000020729	-	90	60.227	Pundamilia_nyererei
ENSORLG00020006582	hnrnpa1a	87	83.957	ENSPNAG00000021630	-	57	86.517	Pygocentrus_nattereri
ENSORLG00020006582	hnrnpa1a	84	86.842	ENSPNAG00000007752	hnrnpa1a	85	75.587	Pygocentrus_nattereri
ENSORLG00020006582	hnrnpa1a	81	60.000	ENSSMAG00000010279	-	93	60.000	Scophthalmus_maximus
ENSORLG00020006582	hnrnpa1a	82	56.250	ENSSMAG00000010246	-	79	55.932	Scophthalmus_maximus
ENSORLG00020006582	hnrnpa1a	96	91.220	ENSSMAG00000004641	hnrnpa1a	90	80.442	Scophthalmus_maximus
ENSORLG00020006582	hnrnpa1a	81	60.116	ENSSDUG00000002431	-	82	60.116	Seriola_dumerili
ENSORLG00020006582	hnrnpa1a	90	96.373	ENSSDUG00000013908	hnrnpa1a	85	100.000	Seriola_dumerili
ENSORLG00020006582	hnrnpa1a	89	97.283	ENSSLDG00000003718	hnrnpa1a	85	96.257	Seriola_lalandi_dorsalis
ENSORLG00020006582	hnrnpa1a	98	92.344	ENSSPAG00000018518	-	90	90.268	Stegastes_partitus
ENSORLG00020006582	hnrnpa1a	96	89.423	ENSTRUG00000020491	-	91	81.940	Takifugu_rubripes
ENSORLG00020006582	hnrnpa1a	85	61.878	ENSTNIG00000007398	-	84	45.878	Tetraodon_nigroviridis
ENSORLG00020006582	hnrnpa1a	86	96.721	ENSXCOG00000009001	-	92	93.056	Xiphophorus_couchianus
ENSORLG00020006582	hnrnpa1a	98	95.215	ENSXMAG00000008076	-	90	82.085	Xiphophorus_maculatus