EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020006656 (Gene tree)
Gene ID: -
Gene Symbol: gpatch8
Alias: -
Full Name: G patch domain containing 8
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 29941 bases
Position: chr8:6564334-6594274
Accession: ZDB-GENE-030131-6966
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020024962	zf-C2H2_jaz	PF12171.8	5.4e-06	1	1
ENSORLP00020024950	zf-C2H2_jaz	PF12171.8	5.5e-06	1	1
ENSORLP00020005829	zf-C2H2_jaz	PF12171.8	5.8e-06	1	1
ENSORLP00020005829	G-patch	PF01585.23	5.6e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020005644	-	9257	-	ENSORLP00020024950	1430 (aa)	-	-
ENSORLT00020005678	-	9207	-	ENSORLP00020024962	1414 (aa)	-	-
ENSORLT00020005615	-	9468	-	ENSORLP00020005829	1493 (aa)	-	-

Gene Model

Click here to download ENSORLG00020006656's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020006656's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020006656	gpatch8	100	79.496	ENSACIG00000012241	gpatch8	61	76.948	Amphilophus_citrinellus
ENSORLG00020006656	gpatch8	61	72.885	ENSATEG00000003247	gpatch8	61	72.993	Anabas_testudineus
ENSORLG00020006656	gpatch8	52	50.185	ENSAPLG00000003095	GPATCH8	51	50.062	Anas_platyrhynchos
ENSORLG00020006656	gpatch8	100	79.521	ENSACLG00000004165	gpatch8	96	77.963	Astatotilapia_calliptera
ENSORLG00020006656	gpatch8	56	74.105	ENSCVAG00000013477	gpatch8	61	75.543	Cyprinodon_variegatus
ENSORLG00020006656	gpatch8	100	60.779	ENSDARG00000059768	gpatch8	57	59.046	Danio_rerio
ENSORLG00020006656	gpatch8	100	61.590	ENSELUG00000019920	gpatch8	58	61.963	Esox_lucius
ENSORLG00020006656	gpatch8	71	58.794	ENSFALG00000009554	GPATCH8	54	58.528	Ficedula_albicollis
ENSORLG00020006656	gpatch8	56	71.395	ENSFHEG00000005791	gpatch8	61	73.673	Fundulus_heteroclitus
ENSORLG00020006656	gpatch8	75	54.714	ENSGALG00000041556	GPATCH8	57	61.390	Gallus_gallus
ENSORLG00020006656	gpatch8	56	74.038	ENSGAFG00000018138	gpatch8	61	75.599	Gambusia_affinis
ENSORLG00020006656	gpatch8	100	79.230	ENSHBUG00000002669	gpatch8	61	76.268	Haplochromis_burtoni
ENSORLG00020006656	gpatch8	78	55.814	ENSHGLG00100010738	GPATCH8	66	61.157	Heterocephalus_glaber_male
ENSORLG00020006656	gpatch8	61	70.033	ENSHCOG00000017518	gpatch8	61	69.197	Hippocampus_comes
ENSORLG00020006656	gpatch8	61	61.734	ENSIPUG00000015431	gpatch8	57	60.535	Ictalurus_punctatus
ENSORLG00020006656	gpatch8	56	75.508	ENSKMAG00000018364	gpatch8	61	77.693	Kryptolebias_marmoratus
ENSORLG00020006656	gpatch8	61	80.172	ENSLOCG00000012265	gpatch8	72	75.177	Lepisosteus_oculatus
ENSORLG00020006656	gpatch8	100	79.854	ENSMZEG00005022584	gpatch8	96	78.101	Maylandia_zebra
ENSORLG00020006656	gpatch8	61	75.136	ENSMMOG00000020472	gpatch8	61	75.461	Mola_mola
ENSORLG00020006656	gpatch8	100	77.415	ENSMALG00000004204	gpatch8	100	77.615	Monopterus_albus
ENSORLG00020006656	gpatch8	100	79.761	ENSNBRG00000016402	gpatch8	61	77.023	Neolamprologus_brichardi
ENSORLG00020006656	gpatch8	100	77.040	ENSONIG00000001292	gpatch8	96	75.416	Oreochromis_niloticus
ENSORLG00020006656	gpatch8	100	98.662	ENSORLG00000028497	gpatch8	100	98.662	Oryzias_latipes
ENSORLG00020006656	gpatch8	100	98.929	ENSORLG00015019797	gpatch8	100	98.929	Oryzias_latipes_hsok
ENSORLG00020006656	gpatch8	61	52.340	ENSPKIG00000018753	gpatch8	56	53.882	Paramormyrops_kingsleyae
ENSORLG00020006656	gpatch8	53	55.650	ENSPKIG00000004860	GPATCH8	51	56.511	Paramormyrops_kingsleyae
ENSORLG00020006656	gpatch8	56	74.221	ENSPFOG00000014833	gpatch8	61	75.978	Poecilia_formosa
ENSORLG00020006656	gpatch8	56	74.221	ENSPLAG00000001035	gpatch8	61	75.978	Poecilia_latipinna
ENSORLG00020006656	gpatch8	56	74.341	ENSPMEG00000024032	gpatch8	61	76.087	Poecilia_mexicana
ENSORLG00020006656	gpatch8	56	73.981	ENSPREG00000008911	gpatch8	61	75.870	Poecilia_reticulata
ENSORLG00020006656	gpatch8	100	79.189	ENSPNYG00000009426	gpatch8	96	78.001	Pundamilia_nyererei
ENSORLG00020006656	gpatch8	59	60.726	ENSPNAG00000016200	gpatch8	60	61.774	Pygocentrus_nattereri
ENSORLG00020006656	gpatch8	54	57.125	ENSSFOG00015004299	GPATCH8	53	57.473	Scleropages_formosus
ENSORLG00020006656	gpatch8	61	68.581	ENSTRUG00000020474	gpatch8	61	68.730	Takifugu_rubripes
ENSORLG00020006656	gpatch8	58	59.375	ENSTBEG00000009486	GPATCH8	55	62.791	Tupaia_belangeri
ENSORLG00020006656	gpatch8	56	73.508	ENSXCOG00000016680	gpatch8	61	75.433	Xiphophorus_couchianus
ENSORLG00020006656	gpatch8	56	73.684	ENSXMAG00000009217	gpatch8	61	75.380	Xiphophorus_maculatus