EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020006712 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: ADP-ribosylation factor 1
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 5786 bases
Position: chr8:6543614-6549399
Accession: 101167961
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020005876	MMR_HSR1	PF01926.23	3.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020005538	-	2377	XM_004071313	ENSORLP00020005876	180 (aa)	XP_004071361	-

Gene Model

Click here to download ENSORLG00020006712's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020006712's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020006712	-	96	30.460	ENSORLG00020004126	arl8a	93	30.460
ENSORLG00020006712	-	83	83.893	ENSORLG00020003354	-	88	83.893
ENSORLG00020006712	-	98	59.322	ENSORLG00020005754	arl1	98	59.322
ENSORLG00020006712	-	97	81.034	ENSORLG00020001755	-	97	81.034
ENSORLG00020006712	-	84	32.500	ENSORLG00020007248	arl15a	78	32.500
ENSORLG00020006712	-	100	42.935	ENSORLG00020015550	ARL6	99	43.333
ENSORLG00020006712	-	93	45.509	ENSORLG00020012894	arl3l2	89	45.509
ENSORLG00020006712	-	97	50.000	ENSORLG00020017337	ARL5A	97	50.000
ENSORLG00020006712	-	90	47.619	ENSORLG00020011342	arl4aa	88	47.619
ENSORLG00020006712	-	94	30.387	ENSORLG00020007024	-	82	30.387
ENSORLG00020006712	-	91	37.805	ENSORLG00020012167	arl2	87	38.415
ENSORLG00020006712	-	100	92.265	ENSORLG00020007477	-	100	92.265
ENSORLG00020006712	-	96	92.442	ENSORLG00020007962	-	98	92.442
ENSORLG00020006712	-	96	47.191	ENSORLG00020007137	arl4cb	91	47.191
ENSORLG00020006712	-	92	46.386	ENSORLG00020002949	arl3	95	46.386
ENSORLG00020006712	-	63	30.894	ENSORLG00020000892	rab1ab	58	30.894
ENSORLG00020006712	-	79	34.722	ENSORLG00020005458	sar1ab	73	34.483
ENSORLG00020006712	-	94	34.615	ENSORLG00020004500	arfrp1	89	34.615
ENSORLG00020006712	-	100	93.370	ENSORLG00020000480	-	100	93.370
ENSORLG00020006712	-	96	31.609	ENSORLG00020021398	arl8ba	94	31.609
ENSORLG00020006712	-	96	49.419	ENSORLG00020009947	arl8	96	49.419
ENSORLG00020006712	-	100	92.265	ENSORLG00020005379	arf3b	100	92.265
ENSORLG00020006712	-	88	47.590	ENSORLG00020011692	-	87	47.590
ENSORLG00020006712	-	90	45.679	ENSORLG00020019239	-	89	45.679
ENSORLG00020006712	-	63	30.894	ENSORLG00020021697	-	58	30.894
ENSORLG00020006712	-	91	41.916	ENSORLG00020003428	-	67	41.916
ENSORLG00020006712	-	98	44.886	ENSORLG00020010074	arl5c	100	45.122
ENSORLG00020006712	-	84	46.711	ENSORLG00020008107	arl11	88	46.711
ENSORLG00020006712	-	87	41.615	ENSORLG00020014120	arl14	87	41.615
ENSORLG00020006712	-	96	32.759	ENSORLG00020002055	arl8bb	94	32.759

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020006712	-	100	96.111	ENSACIG00000012192	-	100	96.111	Amphilophus_citrinellus
ENSORLG00020006712	-	84	96.026	ENSAOCG00000001275	-	88	96.026	Amphiprion_ocellaris
ENSORLG00020006712	-	100	96.111	ENSAPEG00000016909	-	100	96.111	Amphiprion_percula
ENSORLG00020006712	-	100	97.778	ENSATEG00000003174	-	100	97.778	Anabas_testudineus
ENSORLG00020006712	-	100	95.000	ENSACLG00000004123	-	100	95.000	Astatotilapia_calliptera
ENSORLG00020006712	-	100	93.370	ENSAMXG00000019845	arf1	100	93.370	Astyanax_mexicanus
ENSORLG00020006712	-	100	96.667	ENSCVAG00000013374	-	100	96.667	Cyprinodon_variegatus
ENSORLG00020006712	-	100	93.370	ENSDARG00000009484	arf1	100	93.370	Danio_rerio
ENSORLG00020006712	-	100	93.923	ENSELUG00000022533	arf1	79	93.923	Esox_lucius
ENSORLG00020006712	-	100	97.222	ENSFHEG00000005859	-	100	97.222	Fundulus_heteroclitus
ENSORLG00020006712	-	96	89.017	ENSGMOG00000000429	arf1	95	89.017	Gadus_morhua
ENSORLG00020006712	-	100	96.667	ENSGAFG00000018151	-	100	96.667	Gambusia_affinis
ENSORLG00020006712	-	100	85.000	ENSGACG00000014195	-	97	85.000	Gasterosteus_aculeatus
ENSORLG00020006712	-	100	95.000	ENSHBUG00000002636	-	100	95.000	Haplochromis_burtoni
ENSORLG00020006712	-	100	92.818	ENSIPUG00000006311	arf1	100	92.818	Ictalurus_punctatus
ENSORLG00020006712	-	100	95.556	ENSKMAG00000018315	-	100	95.556	Kryptolebias_marmoratus
ENSORLG00020006712	-	99	88.764	ENSLBEG00000023263	-	98	88.764	Labrus_bergylta
ENSORLG00020006712	-	99	87.640	ENSLBEG00000001998	arf1	99	87.640	Labrus_bergylta
ENSORLG00020006712	-	100	97.222	ENSMAMG00000001553	-	100	97.222	Mastacembelus_armatus
ENSORLG00020006712	-	100	95.000	ENSMZEG00005022594	-	100	95.000	Maylandia_zebra
ENSORLG00020006712	-	100	97.222	ENSMALG00000004269	-	100	97.222	Monopterus_albus
ENSORLG00020006712	-	100	95.000	ENSNBRG00000016455	-	100	95.000	Neolamprologus_brichardi
ENSORLG00020006712	-	100	95.000	ENSONIG00000001286	-	100	95.000	Oreochromis_niloticus
ENSORLG00020006712	-	100	99.444	ENSORLG00000023270	-	100	99.444	Oryzias_latipes
ENSORLG00020006712	-	100	99.444	ENSORLG00015019836	-	100	99.444	Oryzias_latipes_hsok
ENSORLG00020006712	-	100	99.444	ENSOMEG00000023784	-	100	99.444	Oryzias_melastigma
ENSORLG00020006712	-	100	88.950	ENSPMGG00000014174	arf1	100	88.950	Periophthalmus_magnuspinnatus
ENSORLG00020006712	-	100	92.778	ENSPMAG00000002035	arf1	100	92.778	Petromyzon_marinus
ENSORLG00020006712	-	100	96.667	ENSPFOG00000014787	-	100	96.667	Poecilia_formosa
ENSORLG00020006712	-	100	96.667	ENSPLAG00000001041	-	100	96.667	Poecilia_latipinna
ENSORLG00020006712	-	100	96.667	ENSPMEG00000024077	-	100	96.667	Poecilia_mexicana
ENSORLG00020006712	-	100	96.667	ENSPREG00000009009	-	100	96.667	Poecilia_reticulata
ENSORLG00020006712	-	100	95.000	ENSPNYG00000009472	-	100	95.000	Pundamilia_nyererei
ENSORLG00020006712	-	94	95.858	ENSPNAG00000000098	arf1	93	95.858	Pygocentrus_nattereri
ENSORLG00020006712	-	99	78.333	YDL192W	-	99	78.333	Saccharomyces_cerevisiae
ENSORLG00020006712	-	99	77.654	YDL137W	-	99	77.654	Saccharomyces_cerevisiae
ENSORLG00020006712	-	100	90.000	ENSSMAG00000006125	-	100	90.000	Scophthalmus_maximus
ENSORLG00020006712	-	100	96.667	ENSSDUG00000017356	-	100	96.667	Seriola_dumerili
ENSORLG00020006712	-	100	96.667	ENSSLDG00000008504	-	100	96.667	Seriola_lalandi_dorsalis
ENSORLG00020006712	-	100	97.778	ENSSPAG00000011431	-	100	97.778	Stegastes_partitus
ENSORLG00020006712	-	100	96.667	ENSTRUG00000019870	-	100	96.667	Takifugu_rubripes
ENSORLG00020006712	-	100	95.000	ENSTNIG00000011685	-	100	95.000	Tetraodon_nigroviridis
ENSORLG00020006712	-	100	96.667	ENSXCOG00000016687	-	98	96.667	Xiphophorus_couchianus
ENSORLG00020006712	-	100	96.667	ENSXMAG00000009193	-	100	96.667	Xiphophorus_maculatus