EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020006782 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 11702 bases
Position: chr5:3045284-3056985
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020005925	RRM_1	PF00076.22	1.1e-13	1	1
ENSORLP00020005955	RRM_1	PF00076.22	1.1e-13	1	1
ENSORLP00020005925	G-patch	PF01585.23	2.5e-15	1	1
ENSORLP00020005955	G-patch	PF01585.23	2.5e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020005459	-	3528	-	ENSORLP00020005925	798 (aa)	-	-
ENSORLT00020005417	-	3753	-	ENSORLP00020005955	798 (aa)	-	-

Gene Model

Click here to download ENSORLG00020006782's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020006782's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020006782	-	98	55.957	ENSORLG00020021744	rbm5	96	57.125
ENSORLG00020006782	-	89	39.359	ENSORLG00020004636	rbm10	79	38.530

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020006782	-	98	53.827	ENSG00000003756	RBM5	95	54.187	Homo_sapiens
ENSORLG00020006782	-	98	56.643	ENSAPOG00000016625	rbm5	96	58.002	Acanthochromis_polyacanthus
ENSORLG00020006782	-	98	70.756	ENSAPOG00000006011	-	96	70.807	Acanthochromis_polyacanthus
ENSORLG00020006782	-	98	53.827	ENSAMEG00000012005	RBM5	95	54.187	Ailuropoda_melanoleuca
ENSORLG00020006782	-	60	63.380	ENSACIG00000007571	rbm5	93	51.071	Amphilophus_citrinellus
ENSORLG00020006782	-	98	65.955	ENSACIG00000021310	-	95	66.206	Amphilophus_citrinellus
ENSORLG00020006782	-	98	64.975	ENSAOCG00000017312	-	95	64.975	Amphiprion_ocellaris
ENSORLG00020006782	-	98	57.298	ENSAOCG00000002880	rbm5	96	57.914	Amphiprion_ocellaris
ENSORLG00020006782	-	90	57.718	ENSAPEG00000011862	rbm5	89	58.255	Amphiprion_percula
ENSORLG00020006782	-	98	70.384	ENSAPEG00000018222	RBM5	96	70.311	Amphiprion_percula
ENSORLG00020006782	-	98	57.317	ENSATEG00000024663	rbm5	96	57.264	Anabas_testudineus
ENSORLG00020006782	-	98	69.630	ENSATEG00000003838	-	96	69.877	Anabas_testudineus
ENSORLG00020006782	-	92	55.305	ENSAPLG00000011176	RBM5	95	55.305	Anas_platyrhynchos
ENSORLG00020006782	-	98	50.726	ENSACAG00000008580	RBM5	96	52.485	Anolis_carolinensis
ENSORLG00020006782	-	99	53.650	ENSANAG00000025199	RBM5	95	53.941	Aotus_nancymaae
ENSORLG00020006782	-	98	56.731	ENSACLG00000012748	rbm5	96	57.434	Astatotilapia_calliptera
ENSORLG00020006782	-	98	68.480	ENSACLG00000024198	RBM5	96	68.362	Astatotilapia_calliptera
ENSORLG00020006782	-	84	59.486	ENSAMXG00000008146	rbm5	95	61.239	Astyanax_mexicanus
ENSORLG00020006782	-	98	53.951	ENSBTAG00000006330	RBM5	95	54.310	Bos_taurus
ENSORLG00020006782	-	98	53.646	ENSCJAG00000004740	RBM5	95	54.064	Callithrix_jacchus
ENSORLG00020006782	-	98	53.704	ENSCAFG00000010866	RBM5	95	54.064	Canis_familiaris
ENSORLG00020006782	-	98	53.704	ENSCAFG00020022126	RBM5	95	54.064	Canis_lupus_dingo
ENSORLG00020006782	-	98	53.827	ENSCHIG00000018435	RBM5	95	54.187	Capra_hircus
ENSORLG00020006782	-	88	52.479	ENSTSYG00000004158	RBM5	100	52.885	Carlito_syrichta
ENSORLG00020006782	-	98	42.360	ENSCAPG00000013495	RBM5	93	60.593	Cavia_aperea
ENSORLG00020006782	-	98	53.779	ENSCPOG00000008151	RBM5	95	53.818	Cavia_porcellus
ENSORLG00020006782	-	98	53.366	ENSCCAG00000026401	RBM5	95	53.865	Cebus_capucinus
ENSORLG00020006782	-	98	53.827	ENSCATG00000041038	RBM5	95	54.187	Cercocebus_atys
ENSORLG00020006782	-	98	53.903	ENSCLAG00000007873	RBM5	95	54.444	Chinchilla_lanigera
ENSORLG00020006782	-	98	53.827	ENSCSAG00000014401	RBM5	95	54.187	Chlorocebus_sabaeus
ENSORLG00020006782	-	85	48.770	ENSCHOG00000009429	RBM5	85	51.312	Choloepus_hoffmanni
ENSORLG00020006782	-	91	54.360	ENSCPBG00000002406	RBM5	96	52.670	Chrysemys_picta_bellii
ENSORLG00020006782	-	98	53.483	ENSCANG00000031250	RBM5	95	53.846	Colobus_angolensis_palliatus
ENSORLG00020006782	-	98	53.808	ENSCGRG00001010543	Rbm5	95	54.353	Cricetulus_griseus_chok1gshd
ENSORLG00020006782	-	98	53.808	ENSCGRG00000008475	Rbm5	95	54.353	Cricetulus_griseus_crigri
ENSORLG00020006782	-	98	55.819	ENSCSEG00000000596	rbm5	94	57.706	Cynoglossus_semilaevis
ENSORLG00020006782	-	98	55.396	ENSCVAG00000005655	rbm5	96	57.074	Cyprinodon_variegatus
ENSORLG00020006782	-	98	49.341	ENSDARG00000098280	rbm5	100	55.960	Danio_rerio
ENSORLG00020006782	-	98	53.704	ENSDNOG00000011756	RBM5	95	53.941	Dasypus_novemcinctus
ENSORLG00020006782	-	98	53.333	ENSDORG00000007692	Rbm5	95	53.875	Dipodomys_ordii
ENSORLG00020006782	-	91	52.561	ENSETEG00000012773	RBM5	88	52.273	Echinops_telfairi
ENSORLG00020006782	-	74	52.907	ENSEBUG00000017034	rbm5	81	55.523	Eptatretus_burgeri
ENSORLG00020006782	-	98	53.704	ENSEASG00005011835	RBM5	95	54.064	Equus_asinus_asinus
ENSORLG00020006782	-	98	53.704	ENSECAG00000020447	RBM5	95	54.064	Equus_caballus
ENSORLG00020006782	-	76	70.253	ENSEEUG00000005943	RBM5	81	70.253	Erinaceus_europaeus
ENSORLG00020006782	-	98	57.521	ENSELUG00000022467	rbm5	96	57.383	Esox_lucius
ENSORLG00020006782	-	98	53.704	ENSFCAG00000014639	RBM5	95	53.941	Felis_catus
ENSORLG00020006782	-	92	55.780	ENSFALG00000008828	RBM5	82	54.615	Ficedula_albicollis
ENSORLG00020006782	-	98	53.589	ENSFDAG00000001897	RBM5	95	54.084	Fukomys_damarensis
ENSORLG00020006782	-	98	56.039	ENSFHEG00000015954	rbm5	96	57.333	Fundulus_heteroclitus
ENSORLG00020006782	-	98	50.250	ENSGMOG00000007810	-	95	49.751	Gadus_morhua
ENSORLG00020006782	-	98	55.405	ENSGMOG00000016224	rbm5	95	55.405	Gadus_morhua
ENSORLG00020006782	-	92	55.808	ENSGALG00000039288	RBM5	79	55.688	Gallus_gallus
ENSORLG00020006782	-	98	55.490	ENSGAFG00000010690	rbm5	96	56.821	Gambusia_affinis
ENSORLG00020006782	-	98	64.365	ENSGACG00000000858	-	96	64.242	Gasterosteus_aculeatus
ENSORLG00020006782	-	98	55.995	ENSGACG00000010469	rbm5	96	56.984	Gasterosteus_aculeatus
ENSORLG00020006782	-	98	51.907	ENSGAGG00000007935	RBM5	99	52.920	Gopherus_agassizii
ENSORLG00020006782	-	98	53.827	ENSGGOG00000014490	RBM5	95	54.187	Gorilla_gorilla
ENSORLG00020006782	-	98	68.850	ENSHBUG00000011901	-	96	68.734	Haplochromis_burtoni
ENSORLG00020006782	-	98	56.731	ENSHBUG00000001941	rbm5	96	57.434	Haplochromis_burtoni
ENSORLG00020006782	-	98	53.383	ENSHGLG00000014844	RBM5	95	53.922	Heterocephalus_glaber_female
ENSORLG00020006782	-	98	53.779	ENSHGLG00100010739	RBM5	95	54.321	Heterocephalus_glaber_male
ENSORLG00020006782	-	98	59.753	ENSHCOG00000004536	-	90	60.494	Hippocampus_comes
ENSORLG00020006782	-	98	55.772	ENSHCOG00000017110	rbm5	99	55.542	Hippocampus_comes
ENSORLG00020006782	-	98	57.509	ENSIPUG00000000640	rbm5	96	58.100	Ictalurus_punctatus
ENSORLG00020006782	-	98	53.457	ENSSTOG00000013856	RBM5	95	54.094	Ictidomys_tridecemlineatus
ENSORLG00020006782	-	98	53.884	ENSJJAG00000008844	Rbm5	95	54.795	Jaculus_jaculus
ENSORLG00020006782	-	98	56.675	ENSKMAG00000006663	rbm5	96	58.486	Kryptolebias_marmoratus
ENSORLG00020006782	-	54	64.444	ENSLBEG00000002522	-	80	64.444	Labrus_bergylta
ENSORLG00020006782	-	98	65.255	ENSLBEG00000010877	-	90	65.212	Labrus_bergylta
ENSORLG00020006782	-	98	55.875	ENSLBEG00000020858	rbm5	96	57.901	Labrus_bergylta
ENSORLG00020006782	-	98	54.121	ENSLACG00000016572	RBM5	95	56.425	Latimeria_chalumnae
ENSORLG00020006782	-	98	56.667	ENSLOCG00000010774	rbm5	96	57.024	Lepisosteus_oculatus
ENSORLG00020006782	-	98	53.514	ENSLAFG00000006733	RBM5	95	54.007	Loxodonta_africana
ENSORLG00020006782	-	98	53.827	ENSMFAG00000031609	RBM5	95	54.187	Macaca_fascicularis
ENSORLG00020006782	-	92	55.319	ENSMMUG00000004921	RBM5	94	54.218	Macaca_mulatta
ENSORLG00020006782	-	98	53.827	ENSMNEG00000044394	RBM5	95	54.187	Macaca_nemestrina
ENSORLG00020006782	-	98	53.358	ENSMLEG00000034689	RBM5	95	53.408	Mandrillus_leucophaeus
ENSORLG00020006782	-	98	68.927	ENSMAMG00000023948	-	95	63.454	Mastacembelus_armatus
ENSORLG00020006782	-	98	58.667	ENSMAMG00000017277	rbm5	96	58.788	Mastacembelus_armatus
ENSORLG00020006782	-	98	56.731	ENSMZEG00005015328	rbm5	96	57.434	Maylandia_zebra
ENSORLG00020006782	-	98	68.232	ENSMZEG00005010035	-	96	68.114	Maylandia_zebra
ENSORLG00020006782	-	92	55.214	ENSMGAG00000003972	RBM5	95	55.214	Meleagris_gallopavo
ENSORLG00020006782	-	92	55.053	ENSMAUG00000020572	Rbm5	93	54.275	Mesocricetus_auratus
ENSORLG00020006782	-	98	53.704	ENSMICG00000016179	RBM5	95	54.064	Microcebus_murinus
ENSORLG00020006782	-	98	53.580	ENSMOCG00000017479	Rbm5	95	54.310	Microtus_ochrogaster
ENSORLG00020006782	-	97	53.944	ENSMMOG00000021804	-	95	53.435	Mola_mola
ENSORLG00020006782	-	98	52.801	ENSMMOG00000015342	rbm5	96	53.039	Mola_mola
ENSORLG00020006782	-	98	54.172	ENSMODG00000012301	RBM5	95	54.399	Monodelphis_domestica
ENSORLG00020006782	-	98	68.936	ENSMALG00000016769	-	96	68.859	Monopterus_albus
ENSORLG00020006782	-	98	51.051	ENSMALG00000000609	rbm5	95	52.153	Monopterus_albus
ENSORLG00020006782	-	98	53.234	MGP_CAROLIEiJ_G0032660	Rbm5	90	72.464	Mus_caroli
ENSORLG00020006782	-	98	53.234	ENSMUSG00000032580	Rbm5	89	72.464	Mus_musculus
ENSORLG00020006782	-	98	53.358	MGP_PahariEiJ_G0015528	Rbm5	90	72.464	Mus_pahari
ENSORLG00020006782	-	98	53.234	MGP_SPRETEiJ_G0033805	Rbm5	98	68.212	Mus_spretus
ENSORLG00020006782	-	98	54.254	ENSMLUG00000007875	RBM5	95	53.941	Myotis_lucifugus
ENSORLG00020006782	-	98	53.616	ENSNGAG00000011777	Rbm5	95	54.332	Nannospalax_galili
ENSORLG00020006782	-	96	62.169	ENSNBRG00000004400	RBM5	95	62.121	Neolamprologus_brichardi
ENSORLG00020006782	-	98	56.611	ENSNBRG00000018097	rbm5	96	57.314	Neolamprologus_brichardi
ENSORLG00020006782	-	98	53.827	ENSNLEG00000006943	RBM5	95	54.187	Nomascus_leucogenys
ENSORLG00020006782	-	83	60.194	ENSMEUG00000012994	RBM5	89	54.040	Notamacropus_eugenii
ENSORLG00020006782	-	91	53.217	ENSOPRG00000015154	RBM5	88	52.996	Ochotona_princeps
ENSORLG00020006782	-	98	51.241	ENSODEG00000019111	-	95	51.415	Octodon_degus
ENSORLG00020006782	-	98	53.903	ENSODEG00000016254	-	95	54.444	Octodon_degus
ENSORLG00020006782	-	98	56.438	ENSONIG00000004107	rbm5	96	56.919	Oreochromis_niloticus
ENSORLG00020006782	-	98	69.667	ENSONIG00000019007	RBM5	96	69.554	Oreochromis_niloticus
ENSORLG00020006782	-	87	55.745	ENSOANG00000006557	RBM5	95	55.728	Ornithorhynchus_anatinus
ENSORLG00020006782	-	98	53.260	ENSOCUG00000011652	RBM5	95	53.571	Oryctolagus_cuniculus
ENSORLG00020006782	-	98	96.688	ENSORLG00000001053	-	95	96.688	Oryzias_latipes
ENSORLG00020006782	-	98	56.401	ENSORLG00000003369	rbm5	99	57.985	Oryzias_latipes
ENSORLG00020006782	-	98	56.077	ENSORLG00015018379	rbm5	96	57.264	Oryzias_latipes_hsok
ENSORLG00020006782	-	100	97.870	ENSORLG00015002854	-	100	97.870	Oryzias_latipes_hsok
ENSORLG00020006782	-	80	64.330	ENSOMEG00000010653	-	91	64.441	Oryzias_melastigma
ENSORLG00020006782	-	98	54.816	ENSOMEG00000002219	rbm5	96	56.490	Oryzias_melastigma
ENSORLG00020006782	-	92	53.753	ENSOGAG00000004205	RBM5	95	53.414	Otolemur_garnettii
ENSORLG00020006782	-	98	53.827	ENSOARG00000010923	RBM5	95	54.187	Ovis_aries
ENSORLG00020006782	-	98	53.827	ENSPPAG00000043010	RBM5	95	54.187	Pan_paniscus
ENSORLG00020006782	-	98	53.704	ENSPPRG00000005404	RBM5	95	53.941	Panthera_pardus
ENSORLG00020006782	-	98	53.704	ENSPTIG00000000962	RBM5	95	53.941	Panthera_tigris_altaica
ENSORLG00020006782	-	98	53.827	ENSPTRG00000014946	RBM5	95	54.187	Pan_troglodytes
ENSORLG00020006782	-	98	53.827	ENSPANG00000018507	RBM5	95	54.187	Papio_anubis
ENSORLG00020006782	-	98	56.595	ENSPKIG00000024837	RBM5	96	56.766	Paramormyrops_kingsleyae
ENSORLG00020006782	-	76	48.226	ENSPKIG00000019187	-	94	48.710	Paramormyrops_kingsleyae
ENSORLG00020006782	-	87	54.406	ENSPSIG00000016073	RBM5	95	55.245	Pelodiscus_sinensis
ENSORLG00020006782	-	78	47.778	ENSPMGG00000017347	rbm5	94	49.209	Periophthalmus_magnuspinnatus
ENSORLG00020006782	-	85	67.147	ENSPMGG00000004719	-	93	68.732	Periophthalmus_magnuspinnatus
ENSORLG00020006782	-	98	40.156	ENSPMAG00000001998	rbm5	95	40.247	Petromyzon_marinus
ENSORLG00020006782	-	98	54.172	ENSPCIG00000021531	RBM5	95	54.579	Phascolarctos_cinereus
ENSORLG00020006782	-	98	55.701	ENSPLAG00000006318	rbm5	96	56.517	Poecilia_latipinna
ENSORLG00020006782	-	73	55.051	ENSPMEG00000008651	rbm5	94	57.095	Poecilia_mexicana
ENSORLG00020006782	-	98	55.542	ENSPMEG00000004295	rbm5	96	56.888	Poecilia_mexicana
ENSORLG00020006782	-	98	54.824	ENSPREG00000003795	rbm5	96	56.361	Poecilia_reticulata
ENSORLG00020006782	-	58	57.522	ENSPCAG00000005459	RBM5	72	57.727	Procavia_capensis
ENSORLG00020006782	-	98	53.704	ENSPCOG00000025840	RBM5	95	53.941	Propithecus_coquereli
ENSORLG00020006782	-	98	51.852	ENSPVAG00000006812	RBM5	95	52.217	Pteropus_vampyrus
ENSORLG00020006782	-	83	69.527	ENSPNYG00000006361	RBM5	94	69.539	Pundamilia_nyererei
ENSORLG00020006782	-	98	56.851	ENSPNYG00000014787	rbm5	96	57.554	Pundamilia_nyererei
ENSORLG00020006782	-	98	55.957	ENSPNAG00000012070	rbm5	96	56.832	Pygocentrus_nattereri
ENSORLG00020006782	-	98	53.789	ENSRNOG00000018153	Rbm5	95	54.624	Rattus_norvegicus
ENSORLG00020006782	-	98	53.970	ENSRBIG00000012679	RBM5	95	54.332	Rhinopithecus_bieti
ENSORLG00020006782	-	98	53.970	ENSRROG00000041331	RBM5	95	54.332	Rhinopithecus_roxellana
ENSORLG00020006782	-	98	53.704	ENSSBOG00000006324	RBM5	95	54.064	Saimiri_boliviensis_boliviensis
ENSORLG00020006782	-	98	53.865	ENSSHAG00000018260	RBM5	95	54.275	Sarcophilus_harrisii
ENSORLG00020006782	-	98	57.246	ENSSFOG00015019052	rbm5	90	58.738	Scleropages_formosus
ENSORLG00020006782	-	98	56.988	ENSSFOG00015019645	-	96	59.486	Scleropages_formosus
ENSORLG00020006782	-	98	56.691	ENSSMAG00000017106	rbm5	96	57.178	Scophthalmus_maximus
ENSORLG00020006782	-	98	57.246	ENSSDUG00000019775	rbm5	96	57.040	Seriola_dumerili
ENSORLG00020006782	-	98	57.609	ENSSLDG00000002329	rbm5	96	57.488	Seriola_lalandi_dorsalis
ENSORLG00020006782	-	98	68.681	ENSSLDG00000015996	-	96	68.927	Seriola_lalandi_dorsalis
ENSORLG00020006782	-	96	53.149	ENSSPUG00000001876	RBM5	85	53.149	Sphenodon_punctatus
ENSORLG00020006782	-	98	70.632	ENSSPAG00000020011	-	96	70.508	Stegastes_partitus
ENSORLG00020006782	-	98	56.377	ENSSPAG00000019638	rbm5	96	57.332	Stegastes_partitus
ENSORLG00020006782	-	98	54.161	ENSSSCG00000011395	RBM5	95	54.523	Sus_scrofa
ENSORLG00020006782	-	92	50.000	ENSTGUG00000006417	RBM5	95	52.021	Taeniopygia_guttata
ENSORLG00020006782	-	98	57.927	ENSTRUG00000008292	rbm5	96	57.753	Takifugu_rubripes
ENSORLG00020006782	-	79	57.200	ENSTNIG00000014742	rbm5	84	57.200	Tetraodon_nigroviridis
ENSORLG00020006782	-	98	48.034	ENSTBEG00000005424	RBM5	95	48.221	Tupaia_belangeri
ENSORLG00020006782	-	94	51.097	ENSTTRG00000007717	RBM5	92	51.351	Tursiops_truncatus
ENSORLG00020006782	-	98	53.827	ENSUAMG00000028347	RBM5	95	54.187	Ursus_americanus
ENSORLG00020006782	-	98	53.827	ENSUMAG00000022027	RBM5	95	54.187	Ursus_maritimus
ENSORLG00020006782	-	93	52.418	ENSVPAG00000009388	RBM5	100	52.803	Vicugna_pacos
ENSORLG00020006782	-	98	53.704	ENSVVUG00000028647	RBM5	95	54.064	Vulpes_vulpes
ENSORLG00020006782	-	98	55.347	ENSXMAG00000016369	rbm5	96	56.888	Xiphophorus_maculatus