EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020006963 (Gene tree)
Gene ID: -
Gene Symbol: zgc:171480
Alias: -
Full Name: zgc:171480
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 2897 bases
Position: chr4:5274842-5277738
Accession: ZDB-GENE-080204-83
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020025157	Mitoc_L55	PF09776.9	3.7e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020005130	-	405	-	ENSORLP00020025157	134 (aa)	-	-

Gene Model

Click here to download ENSORLG00020006963's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020006963's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020006963	zgc:171480	87	63.793	ENSAPOG00000002881	zgc:171480	81	63.793	Acanthochromis_polyacanthus
ENSORLG00020006963	zgc:171480	78	68.269	ENSACIG00000001646	zgc:171480	76	68.269	Amphilophus_citrinellus
ENSORLG00020006963	zgc:171480	78	68.269	ENSAOCG00000016155	zgc:171480	72	68.269	Amphiprion_ocellaris
ENSORLG00020006963	zgc:171480	78	69.231	ENSAPEG00000022327	zgc:171480	72	69.231	Amphiprion_percula
ENSORLG00020006963	zgc:171480	77	66.019	ENSATEG00000005625	zgc:171480	70	66.019	Anabas_testudineus
ENSORLG00020006963	zgc:171480	75	51.485	ENSACAG00000006897	-	80	50.495	Anolis_carolinensis
ENSORLG00020006963	zgc:171480	78	64.423	ENSACLG00000005172	zgc:171480	75	64.423	Astatotilapia_calliptera
ENSORLG00020006963	zgc:171480	91	50.820	ENSAMXG00000043839	zgc:171480	92	52.033	Astyanax_mexicanus
ENSORLG00020006963	zgc:171480	74	56.436	ENSCPBG00000001771	-	81	56.436	Chrysemys_picta_bellii
ENSORLG00020006963	zgc:171480	78	55.238	ENSCSEG00000019533	zgc:171480	76	55.238	Cynoglossus_semilaevis
ENSORLG00020006963	zgc:171480	77	53.398	ENSDARG00000043402	zgc:171480	77	53.398	Danio_rerio
ENSORLG00020006963	zgc:171480	74	53.000	ENSELUG00000007716	zgc:171480	76	53.000	Esox_lucius
ENSORLG00020006963	zgc:171480	68	43.617	ENSFALG00000001083	-	94	43.617	Ficedula_albicollis
ENSORLG00020006963	zgc:171480	77	61.165	ENSFHEG00000000203	zgc:171480	89	52.273	Fundulus_heteroclitus
ENSORLG00020006963	zgc:171480	75	66.337	ENSGMOG00000019009	zgc:171480	99	66.337	Gadus_morhua
ENSORLG00020006963	zgc:171480	64	45.349	ENSGALG00000038820	-	100	40.517	Gallus_gallus
ENSORLG00020006963	zgc:171480	84	64.035	ENSGAFG00000004832	-	80	61.739	Gambusia_affinis
ENSORLG00020006963	zgc:171480	69	69.565	ENSGACG00000002136	zgc:171480	100	69.565	Gasterosteus_aculeatus
ENSORLG00020006963	zgc:171480	84	49.558	ENSGAGG00000001806	-	90	49.558	Gopherus_agassizii
ENSORLG00020006963	zgc:171480	78	64.423	ENSHBUG00000007895	zgc:171480	75	64.423	Haplochromis_burtoni
ENSORLG00020006963	zgc:171480	71	67.368	ENSHCOG00000003526	zgc:171480	52	67.368	Hippocampus_comes
ENSORLG00020006963	zgc:171480	74	59.000	ENSIPUG00000001273	mrpl55	76	59.000	Ictalurus_punctatus
ENSORLG00020006963	zgc:171480	91	59.836	ENSKMAG00000002011	zgc:171480	94	59.836	Kryptolebias_marmoratus
ENSORLG00020006963	zgc:171480	75	68.317	ENSLBEG00000010915	zgc:171480	80	68.317	Labrus_bergylta
ENSORLG00020006963	zgc:171480	75	68.317	ENSLBEG00000016107	-	80	68.317	Labrus_bergylta
ENSORLG00020006963	zgc:171480	75	53.922	ENSLACG00000016281	zgc:171480	77	53.922	Latimeria_chalumnae
ENSORLG00020006963	zgc:171480	78	70.192	ENSMAMG00000022250	zgc:171480	71	70.192	Mastacembelus_armatus
ENSORLG00020006963	zgc:171480	78	64.423	ENSMZEG00005015585	zgc:171480	75	64.423	Maylandia_zebra
ENSORLG00020006963	zgc:171480	86	45.217	ENSMGAG00000002612	-	97	45.217	Meleagris_gallopavo
ENSORLG00020006963	zgc:171480	76	51.961	ENSMMOG00000008740	-	77	51.961	Mola_mola
ENSORLG00020006963	zgc:171480	78	61.905	ENSMALG00000019823	zgc:171480	83	61.905	Monopterus_albus
ENSORLG00020006963	zgc:171480	78	65.385	ENSNBRG00000019447	zgc:171480	75	65.385	Neolamprologus_brichardi
ENSORLG00020006963	zgc:171480	78	64.423	ENSONIG00000007645	zgc:171480	77	64.423	Oreochromis_niloticus
ENSORLG00020006963	zgc:171480	100	97.761	ENSORLG00015003266	zgc:171480	100	97.761	Oryzias_latipes_hsok
ENSORLG00020006963	zgc:171480	91	81.452	ENSOMEG00000008184	zgc:171480	91	81.452	Oryzias_melastigma
ENSORLG00020006963	zgc:171480	97	45.802	ENSPKIG00000006753	zgc:171480	100	45.802	Paramormyrops_kingsleyae
ENSORLG00020006963	zgc:171480	74	52.475	ENSPSIG00000010893	-	81	52.475	Pelodiscus_sinensis
ENSORLG00020006963	zgc:171480	78	60.952	ENSPMGG00000012657	-	81	60.952	Periophthalmus_magnuspinnatus
ENSORLG00020006963	zgc:171480	69	45.263	ENSPMAG00000000867	zgc:171480	81	45.263	Petromyzon_marinus
ENSORLG00020006963	zgc:171480	74	54.369	ENSPCIG00000021848	-	79	54.369	Phascolarctos_cinereus
ENSORLG00020006963	zgc:171480	84	63.158	ENSPFOG00000012703	zgc:171480	81	63.158	Poecilia_formosa
ENSORLG00020006963	zgc:171480	84	64.035	ENSPREG00000020328	zgc:171480	81	64.035	Poecilia_reticulata
ENSORLG00020006963	zgc:171480	78	56.481	ENSPNAG00000017309	zgc:171480	80	56.481	Pygocentrus_nattereri
ENSORLG00020006963	zgc:171480	74	59.000	ENSSFOG00015015668	mrpl55	76	59.000	Scleropages_formosus
ENSORLG00020006963	zgc:171480	78	64.423	ENSSMAG00000005429	zgc:171480	74	64.423	Scophthalmus_maximus
ENSORLG00020006963	zgc:171480	94	59.524	ENSSDUG00000022556	zgc:171480	80	59.524	Seriola_dumerili
ENSORLG00020006963	zgc:171480	94	58.730	ENSSLDG00000019598	zgc:171480	80	58.730	Seriola_lalandi_dorsalis
ENSORLG00020006963	zgc:171480	90	46.667	ENSSPUG00000000735	-	94	46.667	Sphenodon_punctatus
ENSORLG00020006963	zgc:171480	78	68.269	ENSSPAG00000011598	zgc:171480	74	68.269	Stegastes_partitus
ENSORLG00020006963	zgc:171480	88	59.322	ENSTRUG00000003082	zgc:171480	81	59.322	Takifugu_rubripes
ENSORLG00020006963	zgc:171480	72	66.667	ENSXCOG00000005887	zgc:171480	79	66.667	Xiphophorus_couchianus
ENSORLG00020006963	zgc:171480	84	62.281	ENSXMAG00000007937	zgc:171480	81	62.281	Xiphophorus_maculatus