EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020007024 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: secretion associated Ras related GTPase 1A
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 3677 bases
Position: chr19:9830161-9833837
Accession: 101158641
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020025213	MMR_HSR1	PF01926.23	2.6e-05	1	1
ENSORLP00020025207	MMR_HSR1	PF01926.23	2.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020005000	-	2276	-	ENSORLP00020025213	216 (aa)	-	-
ENSORLT00020005015	-	2196	XM_004080416	ENSORLP00020025207	220 (aa)	XP_004080464	-

Gene Model

Click here to download ENSORLG00020007024's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020007024's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020007024	-	54	35.043	ENSORLG00020008107	arl11	68	35.043
ENSORLG00020007024	-	51	35.135	ENSORLG00020002949	arl3	64	35.135
ENSORLG00020007024	-	58	34.646	ENSORLG00020002055	arl8bb	69	34.375
ENSORLG00020007024	-	90	85.859	ENSORLG00020021985	sar1b	100	85.859
ENSORLG00020007024	-	71	31.818	ENSORLG00020003354	-	88	32.237
ENSORLG00020007024	-	81	30.601	ENSORLG00020007962	-	98	30.601
ENSORLG00020007024	-	51	34.234	ENSORLG00020019239	-	61	34.234
ENSORLG00020007024	-	79	30.636	ENSORLG00020001755	-	89	30.636
ENSORLG00020007024	-	72	34.356	ENSORLG00020012894	arl3l2	87	34.356
ENSORLG00020007024	-	60	31.008	ENSORLG00020009947	arl8	72	31.008
ENSORLG00020007024	-	59	33.835	ENSORLG00020011692	-	70	33.835
ENSORLG00020007024	-	56	34.400	ENSORLG00020014120	arl14	68	34.400
ENSORLG00020007024	-	83	32.065	ENSORLG00020005754	arl1	94	32.065
ENSORLG00020007024	-	66	32.394	ENSORLG00020007477	-	78	32.394
ENSORLG00020007024	-	58	33.858	ENSORLG00020004126	arl8a	68	33.594
ENSORLG00020007024	-	58	34.646	ENSORLG00020021398	arl8ba	69	34.375
ENSORLG00020007024	-	82	30.387	ENSORLG00020006712	-	94	30.387
ENSORLG00020007024	-	80	30.000	ENSORLG00020003428	-	68	30.000
ENSORLG00020007024	-	66	33.784	ENSORLG00020007137	arl4cb	74	33.784
ENSORLG00020007024	-	62	32.624	ENSORLG00020004500	arfrp1	70	32.624
ENSORLG00020007024	-	66	32.394	ENSORLG00020005379	arf3b	78	32.394
ENSORLG00020007024	-	61	34.307	ENSORLG00020011342	arl4aa	67	34.307
ENSORLG00020007024	-	58	35.433	ENSORLG00020000480	-	72	35.338
ENSORLG00020007024	-	90	82.323	ENSORLG00020005458	sar1ab	100	82.323
ENSORLG00020007024	-	85	31.053	ENSORLG00020015550	ARL6	97	31.053

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020007024	-	90	80.303	ENSACIG00000019827	sar1ab	100	80.303	Amphilophus_citrinellus
ENSORLG00020007024	-	90	80.808	ENSAOCG00000022062	sar1ab	100	80.808	Amphiprion_ocellaris
ENSORLG00020007024	-	90	80.808	ENSAPEG00000011525	sar1ab	100	80.808	Amphiprion_percula
ENSORLG00020007024	-	90	83.838	ENSATEG00000003466	sar1ab	100	83.838	Anabas_testudineus
ENSORLG00020007024	-	90	78.283	ENSACLG00000013053	sar1ab	100	78.283	Astatotilapia_calliptera
ENSORLG00020007024	-	90	82.323	ENSCSEG00000004825	sar1ab	100	82.323	Cynoglossus_semilaevis
ENSORLG00020007024	-	90	80.808	ENSCVAG00000015162	sar1ab	100	80.808	Cyprinodon_variegatus
ENSORLG00020007024	-	90	88.384	ENSCVAG00000006500	-	100	88.384	Cyprinodon_variegatus
ENSORLG00020007024	-	90	83.838	ENSDARG00000033320	sar1ab	100	83.838	Danio_rerio
ENSORLG00020007024	-	90	90.909	ENSELUG00000013652	sar1a	100	90.909	Esox_lucius
ENSORLG00020007024	-	90	82.828	ENSELUG00000024279	sar1ab	100	82.828	Esox_lucius
ENSORLG00020007024	-	100	72.646	ENSFHEG00000021773	sar1ab	100	79.798	Fundulus_heteroclitus
ENSORLG00020007024	-	90	88.889	ENSFHEG00000012352	-	100	88.889	Fundulus_heteroclitus
ENSORLG00020007024	-	90	79.798	ENSGMOG00000012588	sar1ab	100	79.798	Gadus_morhua
ENSORLG00020007024	-	90	80.303	ENSGAFG00000009702	sar1ab	100	80.303	Gambusia_affinis
ENSORLG00020007024	-	90	89.394	ENSGAFG00000004846	-	100	89.394	Gambusia_affinis
ENSORLG00020007024	-	90	83.838	ENSGACG00000008616	sar1ab	100	83.838	Gasterosteus_aculeatus
ENSORLG00020007024	-	90	78.788	ENSHBUG00000021221	sar1ab	100	78.788	Haplochromis_burtoni
ENSORLG00020007024	-	99	76.147	ENSHCOG00000002845	sar1ab	88	76.147	Hippocampus_comes
ENSORLG00020007024	-	90	80.303	ENSKMAG00000018006	sar1ab	100	80.303	Kryptolebias_marmoratus
ENSORLG00020007024	-	90	83.333	ENSLBEG00000001114	sar1ab	100	83.333	Labrus_bergylta
ENSORLG00020007024	-	90	83.333	ENSMAMG00000021314	sar1ab	100	83.333	Mastacembelus_armatus
ENSORLG00020007024	-	90	78.283	ENSMZEG00005027606	sar1ab	100	78.283	Maylandia_zebra
ENSORLG00020007024	-	90	83.333	ENSMMOG00000010360	sar1ab	100	83.333	Mola_mola
ENSORLG00020007024	-	90	83.333	ENSMALG00000005831	sar1ab	100	83.333	Monopterus_albus
ENSORLG00020007024	-	90	78.788	ENSNBRG00000018772	sar1ab	100	78.788	Neolamprologus_brichardi
ENSORLG00020007024	-	90	79.798	ENSONIG00000018509	sar1ab	100	79.798	Oreochromis_niloticus
ENSORLG00020007024	-	100	99.545	ENSORLG00000009132	-	100	99.545	Oryzias_latipes
ENSORLG00020007024	-	90	81.818	ENSORLG00000006779	sar1ab	67	81.818	Oryzias_latipes
ENSORLG00020007024	-	90	81.818	ENSORLG00015010542	sar1ab	100	81.818	Oryzias_latipes_hsok
ENSORLG00020007024	-	100	99.091	ENSORLG00015006223	-	100	99.091	Oryzias_latipes_hsok
ENSORLG00020007024	-	96	98.113	ENSOMEG00000012020	-	100	99.495	Oryzias_melastigma
ENSORLG00020007024	-	90	81.818	ENSOMEG00000004948	sar1ab	100	81.818	Oryzias_melastigma
ENSORLG00020007024	-	90	84.848	ENSPKIG00000007615	sar1ab	100	84.848	Paramormyrops_kingsleyae
ENSORLG00020007024	-	90	84.343	ENSPMGG00000013330	sar1ab	100	84.343	Periophthalmus_magnuspinnatus
ENSORLG00020007024	-	90	81.313	ENSPFOG00000023432	sar1ab	100	81.313	Poecilia_formosa
ENSORLG00020007024	-	90	81.313	ENSPLAG00000023705	sar1ab	100	81.313	Poecilia_latipinna
ENSORLG00020007024	-	90	88.384	ENSPMEG00000001717	-	100	88.384	Poecilia_mexicana
ENSORLG00020007024	-	90	81.313	ENSPMEG00000000559	sar1ab	100	81.313	Poecilia_mexicana
ENSORLG00020007024	-	90	81.313	ENSPREG00000016098	sar1ab	100	81.313	Poecilia_reticulata
ENSORLG00020007024	-	90	78.788	ENSPNYG00000011603	sar1ab	100	78.788	Pundamilia_nyererei
ENSORLG00020007024	-	90	83.333	ENSPNAG00000008007	sar1ab	100	83.333	Pygocentrus_nattereri
ENSORLG00020007024	-	90	88.889	ENSSFOG00015014010	sar1a	100	88.889	Scleropages_formosus
ENSORLG00020007024	-	51	89.189	ENSSMAG00000020758	sar1ab	80	89.189	Scophthalmus_maximus
ENSORLG00020007024	-	90	82.828	ENSSDUG00000010773	sar1ab	100	82.828	Seriola_dumerili
ENSORLG00020007024	-	90	82.828	ENSSLDG00000025558	sar1ab	100	82.828	Seriola_lalandi_dorsalis
ENSORLG00020007024	-	90	81.818	ENSSPAG00000009194	sar1ab	100	81.818	Stegastes_partitus
ENSORLG00020007024	-	90	80.808	ENSTRUG00000007269	sar1ab	100	80.808	Takifugu_rubripes
ENSORLG00020007024	-	90	80.808	ENSTNIG00000008635	sar1ab	100	80.808	Tetraodon_nigroviridis
ENSORLG00020007024	-	90	89.394	ENSXMAG00000026223	SAR1A	100	89.394	Xiphophorus_maculatus
ENSORLG00020007024	-	90	80.808	ENSXMAG00000003130	sar1ab	100	80.808	Xiphophorus_maculatus