EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020007040 (Gene tree)
Gene ID: -
Gene Symbol: wdhd1
Alias: -
Full Name: WD repeat and HMG-box DNA binding protein 1
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 36734 bases
Position: chr3:799072-835805
Accession: ZDB-GENE-030131-1665
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020006033	eIF2A	PF08662.11	5.9e-05	1	1
ENSORLP00020025131	eIF2A	PF08662.11	6.3e-05	1	1
ENSORLP00020006167	eIF2A	PF08662.11	6.7e-05	1	1
ENSORLP00020025169	eIF2A	PF08662.11	6.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020005271	-	3183	-	ENSORLP00020006033	1060 (aa)	-	-
ENSORLT00020005202	-	4033	-	ENSORLP00020025131	1085 (aa)	-	-
ENSORLT00020005110	-	4169	-	ENSORLP00020025169	1110 (aa)	-	-
ENSORLT00020005052	-	4278	-	ENSORLP00020006167	1110 (aa)	-	-

Gene Model

Click here to download ENSORLG00020007040's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020007040's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020007040	wdhd1	99	57.756	ENSG00000198554	WDHD1	100	78.571	Homo_sapiens
ENSORLG00020007040	wdhd1	99	76.135	ENSAPOG00000001560	wdhd1	100	77.580	Acanthochromis_polyacanthus
ENSORLG00020007040	wdhd1	99	57.531	ENSAMEG00000014356	WDHD1	100	57.741	Ailuropoda_melanoleuca
ENSORLG00020007040	wdhd1	95	82.353	ENSACIG00000021530	wdhd1	100	76.340	Amphilophus_citrinellus
ENSORLG00020007040	wdhd1	100	76.372	ENSAOCG00000018123	wdhd1	100	77.277	Amphiprion_ocellaris
ENSORLG00020007040	wdhd1	100	75.599	ENSAPEG00000000157	wdhd1	100	76.313	Amphiprion_percula
ENSORLG00020007040	wdhd1	100	75.661	ENSATEG00000021986	wdhd1	100	75.926	Anabas_testudineus
ENSORLG00020007040	wdhd1	99	56.404	ENSACAG00000016303	WDHD1	99	56.179	Anolis_carolinensis
ENSORLG00020007040	wdhd1	100	77.817	ENSACLG00000009036	wdhd1	100	77.729	Astatotilapia_calliptera
ENSORLG00020007040	wdhd1	89	70.424	ENSAMXG00000043712	wdhd1	98	71.237	Astyanax_mexicanus
ENSORLG00020007040	wdhd1	99	57.394	ENSBTAG00000019120	WDHD1	99	56.707	Bos_taurus
ENSORLG00020007040	wdhd1	99	58.192	ENSCJAG00000018208	WDHD1	99	57.668	Callithrix_jacchus
ENSORLG00020007040	wdhd1	89	55.479	ENSCAFG00000014989	WDHD1	99	54.212	Canis_familiaris
ENSORLG00020007040	wdhd1	99	57.017	ENSCHIG00000017956	WDHD1	99	56.070	Capra_hircus
ENSORLG00020007040	wdhd1	99	55.880	ENSTSYG00000000266	WDHD1	99	55.438	Carlito_syrichta
ENSORLG00020007040	wdhd1	56	71.739	ENSCCAG00000018389	WDHD1	98	68.977	Cebus_capucinus
ENSORLG00020007040	wdhd1	99	57.786	ENSCATG00000035221	WDHD1	99	57.401	Cercocebus_atys
ENSORLG00020007040	wdhd1	58	61.635	ENSCLAG00000013863	-	99	61.224	Chinchilla_lanigera
ENSORLG00020007040	wdhd1	98	56.989	ENSCSAG00000014757	WDHD1	99	56.143	Chlorocebus_sabaeus
ENSORLG00020007040	wdhd1	100	58.326	ENSCPBG00000020071	WDHD1	99	58.642	Chrysemys_picta_bellii
ENSORLG00020007040	wdhd1	93	63.324	ENSCANG00000037721	WDHD1	99	57.901	Colobus_angolensis_palliatus
ENSORLG00020007040	wdhd1	99	67.702	ENSDARG00000015998	wdhd1	97	77.027	Danio_rerio
ENSORLG00020007040	wdhd1	99	54.266	ENSDNOG00000006661	WDHD1	99	53.631	Dasypus_novemcinctus
ENSORLG00020007040	wdhd1	99	57.862	ENSECAG00000015412	WDHD1	97	57.055	Equus_caballus
ENSORLG00020007040	wdhd1	100	71.050	ENSELUG00000015575	wdhd1	98	77.832	Esox_lucius
ENSORLG00020007040	wdhd1	99	57.821	ENSFCAG00000023408	-	99	56.766	Felis_catus
ENSORLG00020007040	wdhd1	100	57.737	ENSGALG00000012199	WDHD1	100	57.632	Gallus_gallus
ENSORLG00020007040	wdhd1	100	62.577	ENSGACG00000017321	wdhd1	100	63.979	Gasterosteus_aculeatus
ENSORLG00020007040	wdhd1	76	65.773	ENSGAGG00000010665	-	99	62.529	Gopherus_agassizii
ENSORLG00020007040	wdhd1	99	57.318	ENSGGOG00000007744	WDHD1	99	57.016	Gorilla_gorilla
ENSORLG00020007040	wdhd1	99	57.817	ENSHGLG00000015105	WDHD1	99	57.307	Heterocephalus_glaber_female
ENSORLG00020007040	wdhd1	99	57.305	ENSHGLG00100001967	WDHD1	99	56.599	Heterocephalus_glaber_male
ENSORLG00020007040	wdhd1	100	71.586	ENSHCOG00000007286	wdhd1	100	71.168	Hippocampus_comes
ENSORLG00020007040	wdhd1	99	56.941	ENSSTOG00000020300	WDHD1	99	57.015	Ictidomys_tridecemlineatus
ENSORLG00020007040	wdhd1	99	52.604	ENSJJAG00000001164	Wdhd1	99	52.147	Jaculus_jaculus
ENSORLG00020007040	wdhd1	100	75.702	ENSLBEG00000024847	wdhd1	100	75.835	Labrus_bergylta
ENSORLG00020007040	wdhd1	99	56.632	ENSLACG00000019053	WDHD1	99	56.484	Latimeria_chalumnae
ENSORLG00020007040	wdhd1	100	64.136	ENSLOCG00000012086	wdhd1	100	64.154	Lepisosteus_oculatus
ENSORLG00020007040	wdhd1	99	59.019	ENSLAFG00000005385	WDHD1	100	57.977	Loxodonta_africana
ENSORLG00020007040	wdhd1	99	57.630	ENSMFAG00000032915	WDHD1	99	57.259	Macaca_fascicularis
ENSORLG00020007040	wdhd1	99	57.618	ENSMMUG00000000302	WDHD1	99	56.766	Macaca_mulatta
ENSORLG00020007040	wdhd1	99	57.630	ENSMNEG00000032489	WDHD1	99	57.259	Macaca_nemestrina
ENSORLG00020007040	wdhd1	99	57.630	ENSMLEG00000035661	WDHD1	99	57.259	Mandrillus_leucophaeus
ENSORLG00020007040	wdhd1	100	75.508	ENSMAMG00000016742	wdhd1	100	75.376	Mastacembelus_armatus
ENSORLG00020007040	wdhd1	100	77.905	ENSMZEG00005015228	wdhd1	100	77.817	Maylandia_zebra
ENSORLG00020007040	wdhd1	100	57.293	ENSMGAG00000013676	WDHD1	100	56.617	Meleagris_gallopavo
ENSORLG00020007040	wdhd1	99	56.968	ENSMICG00000016239	WDHD1	99	56.449	Microcebus_murinus
ENSORLG00020007040	wdhd1	100	70.911	ENSMMOG00000007869	wdhd1	100	71.201	Mola_mola
ENSORLG00020007040	wdhd1	100	56.344	ENSMODG00000011703	WDHD1	100	55.712	Monodelphis_domestica
ENSORLG00020007040	wdhd1	59	59.062	MGP_CAROLIEiJ_G0019163	Wdhd1	99	58.594	Mus_caroli
ENSORLG00020007040	wdhd1	59	58.970	MGP_PahariEiJ_G0030180	Wdhd1	99	58.125	Mus_pahari
ENSORLG00020007040	wdhd1	99	54.585	ENSMPUG00000005542	WDHD1	99	53.686	Mustela_putorius_furo
ENSORLG00020007040	wdhd1	99	58.348	ENSMLUG00000010353	WDHD1	99	57.118	Myotis_lucifugus
ENSORLG00020007040	wdhd1	100	76.985	ENSNBRG00000010071	wdhd1	100	76.800	Neolamprologus_brichardi
ENSORLG00020007040	wdhd1	99	57.272	ENSNLEG00000012760	WDHD1	99	56.890	Nomascus_leucogenys
ENSORLG00020007040	wdhd1	85	51.508	ENSMEUG00000006706	WDHD1	82	52.482	Notamacropus_eugenii
ENSORLG00020007040	wdhd1	100	76.795	ENSONIG00000007084	wdhd1	100	77.241	Oreochromis_niloticus
ENSORLG00020007040	wdhd1	99	57.344	ENSOCUG00000004987	WDHD1	99	56.726	Oryctolagus_cuniculus
ENSORLG00020007040	wdhd1	95	90.650	ENSORLG00000019721	wdhd1	98	90.551	Oryzias_latipes
ENSORLG00020007040	wdhd1	100	98.468	ENSORLG00015008848	wdhd1	100	98.468	Oryzias_latipes_hsok
ENSORLG00020007040	wdhd1	99	56.415	ENSOGAG00000003465	WDHD1	99	56.255	Otolemur_garnettii
ENSORLG00020007040	wdhd1	99	57.344	ENSOARG00000021081	WDHD1	99	56.222	Ovis_aries
ENSORLG00020007040	wdhd1	99	56.866	ENSPPAG00000035486	WDHD1	99	56.673	Pan_paniscus
ENSORLG00020007040	wdhd1	99	58.172	ENSPPRG00000007679	WDHD1	99	57.118	Panthera_pardus
ENSORLG00020007040	wdhd1	99	57.996	ENSPTIG00000013608	WDHD1	99	57.030	Panthera_tigris_altaica
ENSORLG00020007040	wdhd1	99	57.669	ENSPTRG00000006366	WDHD1	99	57.194	Pan_troglodytes
ENSORLG00020007040	wdhd1	99	57.394	ENSPANG00000017506	WDHD1	99	56.786	Papio_anubis
ENSORLG00020007040	wdhd1	100	62.002	ENSPKIG00000004863	wdhd1	100	61.615	Paramormyrops_kingsleyae
ENSORLG00020007040	wdhd1	100	56.518	ENSPSIG00000011635	WDHD1	99	57.957	Pelodiscus_sinensis
ENSORLG00020007040	wdhd1	99	57.544	ENSPPYG00000005834	WDHD1	99	56.955	Pongo_abelii
ENSORLG00020007040	wdhd1	99	53.556	ENSPVAG00000016064	WDHD1	99	53.122	Pteropus_vampyrus
ENSORLG00020007040	wdhd1	100	76.561	ENSPNYG00000019115	wdhd1	94	89.967	Pundamilia_nyererei
ENSORLG00020007040	wdhd1	100	67.018	ENSPNAG00000013823	wdhd1	100	66.843	Pygocentrus_nattereri
ENSORLG00020007040	wdhd1	99	56.652	ENSRNOG00000011167	Wdhd1	99	55.937	Rattus_norvegicus
ENSORLG00020007040	wdhd1	99	57.557	ENSRROG00000006993	WDHD1	99	57.306	Rhinopithecus_roxellana
ENSORLG00020007040	wdhd1	99	54.842	ENSSBOG00000034847	WDHD1	99	54.354	Saimiri_boliviensis_boliviensis
ENSORLG00020007040	wdhd1	98	54.882	ENSSHAG00000013551	WDHD1	100	54.653	Sarcophilus_harrisii
ENSORLG00020007040	wdhd1	99	64.760	ENSSFOG00015009950	wdhd1	99	64.668	Scleropages_formosus
ENSORLG00020007040	wdhd1	100	73.814	ENSSMAG00000007346	wdhd1	100	76.032	Scophthalmus_maximus
ENSORLG00020007040	wdhd1	100	71.416	ENSSDUG00000016996	wdhd1	100	71.239	Seriola_dumerili
ENSORLG00020007040	wdhd1	100	72.744	ENSSLDG00000021689	wdhd1	95	88.235	Seriola_lalandi_dorsalis
ENSORLG00020007040	wdhd1	99	58.099	ENSSSCG00000005052	WDHD1	99	57.756	Sus_scrofa
ENSORLG00020007040	wdhd1	100	72.335	ENSTNIG00000018803	wdhd1	100	73.286	Tetraodon_nigroviridis
ENSORLG00020007040	wdhd1	99	54.867	ENSTTRG00000003314	WDHD1	99	54.200	Tursiops_truncatus
ENSORLG00020007040	wdhd1	63	63.636	ENSUAMG00000015360	-	96	62.952	Ursus_americanus
ENSORLG00020007040	wdhd1	99	58.202	ENSUMAG00000015946	WDHD1	99	57.469	Ursus_maritimus
ENSORLG00020007040	wdhd1	95	64.512	ENSVPAG00000008394	WDHD1	99	56.766	Vicugna_pacos
ENSORLG00020007040	wdhd1	99	57.706	ENSVVUG00000029613	WDHD1	99	56.904	Vulpes_vulpes
ENSORLG00020007040	wdhd1	100	56.556	ENSXETG00000012210	wdhd1	100	55.989	Xenopus_tropicalis