EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020007084 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 4103 bases
Position: chr10:4606898-4611000
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020025252	RRM_1	PF00076.22	1.2e-32	1	2
ENSORLP00020025252	RRM_1	PF00076.22	1.2e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020004903	-	657	-	ENSORLP00020025252	218 (aa)	-	-

Gene Model

Click here to download ENSORLG00020007084's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020007084's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020007084	-	92	65.816	ENSORLG00020007148	hnrnpa0a	62	65.816
ENSORLG00020007084	-	82	97.403	ENSORLG00020008203	-	68	97.403
ENSORLG00020007084	-	76	30.909	ENSORLG00020007776	hnrnpabb	50	30.909
ENSORLG00020007084	-	77	49.701	ENSORLG00020006582	hnrnpa1a	81	50.633
ENSORLG00020007084	-	94	64.423	ENSORLG00020022487	-	62	72.671
ENSORLG00020007084	-	82	95.455	ENSORLG00020006029	-	67	95.455
ENSORLG00020007084	-	74	35.484	ENSORLG00020008266	MSI1	51	34.356
ENSORLG00020007084	-	77	56.364	ENSORLG00020007171	-	96	56.364
ENSORLG00020007084	-	84	95.652	ENSORLG00020007505	-	70	95.652
ENSORLG00020007084	-	79	31.959	ENSORLG00020013159	tardbpl	61	31.959
ENSORLG00020007084	-	82	99.351	ENSORLG00020007109	-	65	99.351
ENSORLG00020007084	-	84	95.513	ENSORLG00020006043	-	70	95.513
ENSORLG00020007084	-	71	34.343	ENSORLG00020014780	hnrnpd	53	34.343
ENSORLG00020007084	-	77	33.533	ENSORLG00020021556	msi2a	55	33.750
ENSORLG00020007084	-	83	71.429	ENSORLG00020022498	-	89	71.429

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020007084	-	77	71.779	ENSAOCG00000015951	-	98	71.779	Amphiprion_ocellaris
ENSORLG00020007084	-	77	59.627	ENSAOCG00000015914	-	63	58.788	Amphiprion_ocellaris
ENSORLG00020007084	-	77	71.779	ENSAPEG00000002274	-	98	71.779	Amphiprion_percula
ENSORLG00020007084	-	77	59.627	ENSAPEG00000002224	-	74	58.788	Amphiprion_percula
ENSORLG00020007084	-	77	59.627	ENSACLG00000008978	-	83	58.788	Astatotilapia_calliptera
ENSORLG00020007084	-	77	56.364	ENSCVAG00000008324	-	85	56.364	Cyprinodon_variegatus
ENSORLG00020007084	-	75	44.295	FBgn0001215	Hrb98DE	50	44.295	Drosophila_melanogaster
ENSORLG00020007084	-	80	42.045	FBgn0004237	Hrb87F	70	42.045	Drosophila_melanogaster
ENSORLG00020007084	-	79	32.955	ENSEBUG00000010003	-	92	32.955	Eptatretus_burgeri
ENSORLG00020007084	-	75	60.870	ENSELUG00000014407	-	98	60.870	Esox_lucius
ENSORLG00020007084	-	77	59.627	ENSHBUG00000023867	-	83	58.788	Haplochromis_burtoni
ENSORLG00020007084	-	74	57.143	ENSHCOG00000007180	-	75	57.143	Hippocampus_comes
ENSORLG00020007084	-	79	54.971	ENSLBEG00000006362	-	81	54.971	Labrus_bergylta
ENSORLG00020007084	-	51	60.360	ENSLOCG00000012121	-	60	60.360	Lepisosteus_oculatus
ENSORLG00020007084	-	77	56.970	ENSMAMG00000017728	-	67	56.970	Mastacembelus_armatus
ENSORLG00020007084	-	77	58.788	ENSMZEG00005001063	-	82	58.788	Maylandia_zebra
ENSORLG00020007084	-	77	69.565	ENSMMOG00000004242	-	98	69.565	Mola_mola
ENSORLG00020007084	-	72	46.835	ENSMEUG00000003051	-	50	46.835	Notamacropus_eugenii
ENSORLG00020007084	-	84	97.436	ENSORLG00000023176	-	68	97.436	Oryzias_latipes
ENSORLG00020007084	-	77	69.136	ENSORLG00000030284	-	63	67.257	Oryzias_latipes
ENSORLG00020007084	-	82	95.455	ENSORLG00000023542	-	70	95.455	Oryzias_latipes
ENSORLG00020007084	-	82	64.242	ENSOMEG00000023475	-	73	64.242	Oryzias_melastigma
ENSORLG00020007084	-	78	68.750	ENSOMEG00000006327	-	70	68.750	Oryzias_melastigma
ENSORLG00020007084	-	78	64.242	ENSOMEG00000002509	-	87	62.805	Oryzias_melastigma
ENSORLG00020007084	-	78	64.242	ENSOMEG00000012368	-	72	64.242	Oryzias_melastigma
ENSORLG00020007084	-	72	70.769	ENSOMEG00000002084	-	70	70.769	Oryzias_melastigma
ENSORLG00020007084	-	74	63.804	ENSOMEG00000002000	-	62	63.804	Oryzias_melastigma
ENSORLG00020007084	-	75	66.026	ENSOMEG00000021030	-	73	66.026	Oryzias_melastigma
ENSORLG00020007084	-	77	63.690	ENSOMEG00000009566	-	87	63.690	Oryzias_melastigma
ENSORLG00020007084	-	75	63.030	ENSOMEG00000006903	-	77	63.030	Oryzias_melastigma
ENSORLG00020007084	-	77	56.364	ENSPREG00000010603	-	59	56.364	Poecilia_reticulata
ENSORLG00020007084	-	77	59.627	ENSPNYG00000020763	-	83	58.788	Pundamilia_nyererei
ENSORLG00020007084	-	75	60.377	ENSPNAG00000018051	-	80	60.377	Pygocentrus_nattereri
ENSORLG00020007084	-	78	52.941	ENSSHAG00000015609	-	80	55.414	Sarcophilus_harrisii
ENSORLG00020007084	-	79	57.895	ENSSDUG00000002394	-	89	57.895	Seriola_dumerili
ENSORLG00020007084	-	80	70.370	ENSSLDG00000024685	-	88	70.370	Seriola_lalandi_dorsalis