EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020007171 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 1036 bases
Position: chr10:4574026-4575061
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020025294	RRM_1	PF00076.22	4.2e-32	1	2
ENSORLP00020025294	RRM_1	PF00076.22	4.2e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020004794	-	543	-	ENSORLP00020025294	180 (aa)	-	-

Gene Model

Click here to download ENSORLG00020007171's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020007171's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020007171	-	93	42.105	ENSORLG00020007776	hnrnpabb	53	40.506
ENSORLG00020007171	-	96	37.349	ENSORLG00020021556	msi2a	55	37.349
ENSORLG00020007171	-	97	32.500	ENSORLG00020013159	tardbpl	53	32.500
ENSORLG00020007171	-	96	58.721	ENSORLG00020006043	-	62	58.721
ENSORLG00020007171	-	96	57.225	ENSORLG00020022498	-	89	57.225
ENSORLG00020007171	-	96	57.558	ENSORLG00020007109	-	59	57.558
ENSORLG00020007171	-	96	58.382	ENSORLG00020007505	-	61	58.382
ENSORLG00020007171	-	96	39.881	ENSORLG00020008266	MSI1	56	39.881
ENSORLG00020007171	-	95	55.556	ENSORLG00020006582	hnrnpa1a	81	55.556
ENSORLG00020007171	-	91	32.143	ENSORLG00020022188	slirp	84	32.143
ENSORLG00020007171	-	95	51.462	ENSORLG00020020788	hnrnpa3	52	51.462
ENSORLG00020007171	-	99	38.251	ENSORLG00020015195	dazap1	50	38.251
ENSORLG00020007171	-	95	58.434	ENSORLG00020008203	-	61	58.434
ENSORLG00020007171	-	96	60.116	ENSORLG00020022487	-	79	60.116
ENSORLG00020007171	-	95	59.639	ENSORLG00020006029	-	60	59.639
ENSORLG00020007171	-	96	56.364	ENSORLG00020007084	-	77	56.364

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020007171	-	97	90.805	ENSAOCG00000015914	-	63	90.805	Amphiprion_ocellaris
ENSORLG00020007171	-	96	72.671	ENSAOCG00000015951	-	96	72.671	Amphiprion_ocellaris
ENSORLG00020007171	-	97	90.805	ENSAPEG00000002224	-	74	90.805	Amphiprion_percula
ENSORLG00020007171	-	96	72.671	ENSAPEG00000002274	-	96	72.671	Amphiprion_percula
ENSORLG00020007171	-	97	91.379	ENSACLG00000008978	-	81	91.379	Astatotilapia_calliptera
ENSORLG00020007171	-	97	91.954	ENSCVAG00000008324	-	76	91.954	Cyprinodon_variegatus
ENSORLG00020007171	-	96	34.375	ENSEBUG00000010003	-	90	34.375	Eptatretus_burgeri
ENSORLG00020007171	-	96	73.333	ENSELUG00000014407	-	98	73.333	Esox_lucius
ENSORLG00020007171	-	97	91.379	ENSHBUG00000023867	-	81	91.379	Haplochromis_burtoni
ENSORLG00020007171	-	97	79.310	ENSHCOG00000007180	-	75	79.310	Hippocampus_comes
ENSORLG00020007171	-	96	86.747	ENSLBEG00000006362	-	79	86.747	Labrus_bergylta
ENSORLG00020007171	-	89	74.107	ENSLOCG00000012121	-	65	74.107	Lepisosteus_oculatus
ENSORLG00020007171	-	97	90.805	ENSMAMG00000017728	-	67	90.805	Mastacembelus_armatus
ENSORLG00020007171	-	97	91.379	ENSMZEG00005001063	-	80	91.379	Maylandia_zebra
ENSORLG00020007171	-	96	72.222	ENSMMOG00000004242	-	98	72.222	Mola_mola
ENSORLG00020007171	-	96	43.182	ENSMEUG00000003051	-	55	43.429	Notamacropus_eugenii
ENSORLG00020007171	-	95	58.580	ENSORLG00000023542	-	62	58.580	Oryzias_latipes
ENSORLG00020007171	-	96	58.960	ENSORLG00000023176	-	61	58.960	Oryzias_latipes
ENSORLG00020007171	-	100	57.803	ENSORLG00000030284	-	85	57.803	Oryzias_latipes
ENSORLG00020007171	-	97	55.682	ENSOMEG00000012368	-	67	55.682	Oryzias_melastigma
ENSORLG00020007171	-	98	55.114	ENSOMEG00000021030	-	82	55.114	Oryzias_melastigma
ENSORLG00020007171	-	98	55.682	ENSOMEG00000006903	-	82	55.682	Oryzias_melastigma
ENSORLG00020007171	-	93	46.471	ENSOMEG00000006327	-	64	46.471	Oryzias_melastigma
ENSORLG00020007171	-	97	59.615	ENSOMEG00000002000	-	69	59.615	Oryzias_melastigma
ENSORLG00020007171	-	96	52.410	ENSOMEG00000009566	-	87	52.410	Oryzias_melastigma
ENSORLG00020007171	-	94	62.821	ENSOMEG00000002084	-	73	62.821	Oryzias_melastigma
ENSORLG00020007171	-	96	57.692	ENSOMEG00000002509	-	88	56.471	Oryzias_melastigma
ENSORLG00020007171	-	98	55.682	ENSOMEG00000023475	-	80	55.682	Oryzias_melastigma
ENSORLG00020007171	-	97	91.954	ENSPREG00000010603	-	59	91.954	Poecilia_reticulata
ENSORLG00020007171	-	97	91.379	ENSPNYG00000020763	-	81	91.379	Pundamilia_nyererei
ENSORLG00020007171	-	95	69.753	ENSPNAG00000018051	-	80	69.753	Pygocentrus_nattereri
ENSORLG00020007171	-	96	61.628	ENSSHAG00000015609	-	82	61.272	Sarcophilus_harrisii
ENSORLG00020007171	-	96	89.759	ENSSDUG00000002394	-	87	89.759	Seriola_dumerili
ENSORLG00020007171	-	96	72.436	ENSSLDG00000024685	-	88	72.436	Seriola_lalandi_dorsalis