EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020007199 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Minus strand
Length: 10409 bases
Position: chr21:29505965-29516373
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020025307	Nop52	PF05997.12	2.4e-67	1	1
ENSORLP00020006359	Nop52	PF05997.12	2.8e-67	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020004764	-	3644	-	ENSORLP00020025307	825 (aa)	-	-
ENSORLT00020004727	-	3794	-	ENSORLP00020006359	875 (aa)	-	-

Gene Model

Click here to download ENSORLG00020007199's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020007199's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020007199	-	56	51.613	ENSG00000160208	RRP1B	65	48.413	Homo_sapiens
ENSORLG00020007199	-	56	68.280	ENSAPOG00000007490	-	93	61.224	Acanthochromis_polyacanthus
ENSORLG00020007199	-	56	51.087	ENSAMEG00000011401	RRP1B	68	46.457	Ailuropoda_melanoleuca
ENSORLG00020007199	-	51	73.333	ENSAOCG00000017894	-	100	73.333	Amphiprion_ocellaris
ENSORLG00020007199	-	57	68.984	ENSAPEG00000024150	-	93	61.224	Amphiprion_percula
ENSORLG00020007199	-	58	67.033	ENSATEG00000005045	-	50	64.835	Anabas_testudineus
ENSORLG00020007199	-	57	49.849	ENSAPLG00000004310	RRP1B	65	49.538	Anas_platyrhynchos
ENSORLG00020007199	-	63	48.615	ENSACAG00000017851	RRP1B	66	49.246	Anolis_carolinensis
ENSORLG00020007199	-	58	47.480	ENSANAG00000034889	RRP1B	67	46.791	Aotus_nancymaae
ENSORLG00020007199	-	55	52.874	ENSBTAG00000017418	RRP1B	61	52.874	Bos_taurus
ENSORLG00020007199	-	56	50.538	ENSCJAG00000017077	RRP1B	65	47.287	Callithrix_jacchus
ENSORLG00020007199	-	50	52.381	ENSCAFG00000010621	RRP1B	63	46.032	Canis_familiaris
ENSORLG00020007199	-	56	51.613	ENSCAFG00020018901	RRP1B	67	46.032	Canis_lupus_dingo
ENSORLG00020007199	-	55	52.874	ENSCHIG00000021519	RRP1B	61	52.874	Capra_hircus
ENSORLG00020007199	-	52	54.878	ENSCPOG00000002396	RRP1B	68	54.878	Cavia_porcellus
ENSORLG00020007199	-	56	50.538	ENSCCAG00000029384	RRP1B	67	46.524	Cebus_capucinus
ENSORLG00020007199	-	56	48.413	ENSCATG00000017423	RRP1B	65	48.413	Cercocebus_atys
ENSORLG00020007199	-	52	51.613	ENSCLAG00000005622	RRP1B	64	51.613	Chinchilla_lanigera
ENSORLG00020007199	-	56	47.619	ENSCSAG00000007961	RRP1B	65	47.619	Chlorocebus_sabaeus
ENSORLG00020007199	-	62	52.646	ENSCPBG00000010310	RRP1B	65	51.368	Chrysemys_picta_bellii
ENSORLG00020007199	-	56	50.538	ENSCANG00000040952	RRP1B	65	46.923	Colobus_angolensis_palliatus
ENSORLG00020007199	-	54	46.281	ENSCGRG00001023882	-	58	68.182	Cricetulus_griseus_chok1gshd
ENSORLG00020007199	-	54	46.499	ENSCGRG00001010889	-	65	45.652	Cricetulus_griseus_chok1gshd
ENSORLG00020007199	-	51	45.736	ENSCGRG00000001553	Rrp1b	62	45.600	Cricetulus_griseus_crigri
ENSORLG00020007199	-	56	60.638	ENSCSEG00000020711	-	86	58.438	Cynoglossus_semilaevis
ENSORLG00020007199	-	66	54.958	ENSDARG00000103337	rrp1	90	54.011	Danio_rerio
ENSORLG00020007199	-	59	45.430	ENSDNOG00000032774	RRP1B	68	45.135	Dasypus_novemcinctus
ENSORLG00020007199	-	53	54.762	ENSETEG00000019489	RRP1B	58	54.762	Echinops_telfairi
ENSORLG00020007199	-	50	44.342	ENSEASG00005001673	RRP1	82	48.518	Equus_asinus_asinus
ENSORLG00020007199	-	56	46.825	ENSEASG00005001687	RRP1B	65	46.825	Equus_asinus_asinus
ENSORLG00020007199	-	50	44.804	ENSECAG00000015703	RRP1	82	49.057	Equus_caballus
ENSORLG00020007199	-	58	45.358	ENSECAG00000018018	RRP1B	67	45.308	Equus_caballus
ENSORLG00020007199	-	55	60.779	ENSELUG00000015885	-	93	57.604	Esox_lucius
ENSORLG00020007199	-	56	53.608	ENSFCAG00000010272	RRP1B	62	51.546	Felis_catus
ENSORLG00020007199	-	62	48.123	ENSFALG00000002024	RRP1B	64	48.562	Ficedula_albicollis
ENSORLG00020007199	-	53	48.387	ENSFDAG00000010899	RRP1B	66	44.056	Fukomys_damarensis
ENSORLG00020007199	-	61	63.686	ENSFHEG00000016314	-	60	63.144	Fundulus_heteroclitus
ENSORLG00020007199	-	62	59.290	ENSGMOG00000001953	-	73	58.355	Gadus_morhua
ENSORLG00020007199	-	51	65.385	ENSGALG00000035696	RRP1B	54	65.385	Gallus_gallus
ENSORLG00020007199	-	62	63.488	ENSGACG00000001438	rrp1	80	61.347	Gasterosteus_aculeatus
ENSORLG00020007199	-	62	52.747	ENSGAGG00000000375	RRP1B	67	50.811	Gopherus_agassizii
ENSORLG00020007199	-	56	51.613	ENSGGOG00000012069	RRP1B	65	48.413	Gorilla_gorilla
ENSORLG00020007199	-	55	50.538	ENSHGLG00000004968	RRP1B	65	43.784	Heterocephalus_glaber_female
ENSORLG00020007199	-	63	56.206	ENSHCOG00000018388	-	67	55.660	Hippocampus_comes
ENSORLG00020007199	-	51	63.768	ENSIPUG00000000673	-	76	50.620	Ictalurus_punctatus
ENSORLG00020007199	-	52	52.381	ENSSTOG00000011790	RRP1B	67	45.308	Ictidomys_tridecemlineatus
ENSORLG00020007199	-	50	55.914	ENSJJAG00000021279	Rrp1b	57	55.914	Jaculus_jaculus
ENSORLG00020007199	-	65	61.814	ENSKMAG00000005539	rrp1	100	61.244	Kryptolebias_marmoratus
ENSORLG00020007199	-	56	52.316	ENSLACG00000017332	-	57	66.667	Latimeria_chalumnae
ENSORLG00020007199	-	71	58.793	ENSLOCG00000004064	-	74	58.793	Lepisosteus_oculatus
ENSORLG00020007199	-	50	45.602	ENSLAFG00000000766	RRP1B	94	44.254	Loxodonta_africana
ENSORLG00020007199	-	56	48.413	ENSMFAG00000039152	RRP1B	65	48.413	Macaca_fascicularis
ENSORLG00020007199	-	56	51.613	ENSMMUG00000000104	RRP1B	60	54.023	Macaca_mulatta
ENSORLG00020007199	-	56	49.206	ENSMNEG00000034269	RRP1B	65	48.413	Macaca_nemestrina
ENSORLG00020007199	-	51	48.413	ENSMLEG00000040044	RRP1B	62	48.413	Mandrillus_leucophaeus
ENSORLG00020007199	-	69	60.859	ENSMAMG00000007131	-	60	61.869	Mastacembelus_armatus
ENSORLG00020007199	-	54	50.815	ENSMGAG00000014591	RRP1B	61	50.815	Meleagris_gallopavo
ENSORLG00020007199	-	51	46.923	ENSMAUG00000021508	Rrp1b	61	46.825	Mesocricetus_auratus
ENSORLG00020007199	-	56	53.763	ENSMICG00000004686	RRP1B	69	46.853	Microcebus_murinus
ENSORLG00020007199	-	53	51.613	ENSMOCG00000001117	Rrp1b	58	50.538	Microtus_ochrogaster
ENSORLG00020007199	-	62	50.138	ENSMODG00000021033	RRP1B	69	48.062	Monodelphis_domestica
ENSORLG00020007199	-	53	48.454	MGP_CAROLIEiJ_G0021376	Rrp1b	56	65.152	Mus_caroli
ENSORLG00020007199	-	53	47.289	ENSMUSG00000058392	Rrp1b	56	66.667	Mus_musculus
ENSORLG00020007199	-	54	48.387	MGP_PahariEiJ_G0023695	Rrp1b	56	65.152	Mus_pahari
ENSORLG00020007199	-	55	46.552	MGP_SPRETEiJ_G0022290	Rrp1b	56	66.667	Mus_spretus
ENSORLG00020007199	-	72	44.504	ENSMLUG00000007738	RRP1B	65	46.774	Myotis_lucifugus
ENSORLG00020007199	-	51	53.086	ENSNGAG00000021073	Rrp1b	57	54.321	Nannospalax_galili
ENSORLG00020007199	-	56	51.613	ENSNLEG00000001490	RRP1B	67	48.413	Nomascus_leucogenys
ENSORLG00020007199	-	52	58.475	ENSMEUG00000003226	-	59	58.475	Notamacropus_eugenii
ENSORLG00020007199	-	50	53.086	ENSODEG00000013177	RRP1B	58	53.086	Octodon_degus
ENSORLG00020007199	-	53	63.380	ENSONIG00000004264	rrp1	97	61.404	Oreochromis_niloticus
ENSORLG00020007199	-	59	44.173	ENSOANG00000006470	RRP1B	68	42.338	Ornithorhynchus_anatinus
ENSORLG00020007199	-	50	44.056	ENSOCUG00000025931	RRP1B	63	44.056	Oryctolagus_cuniculus
ENSORLG00020007199	-	100	95.216	ENSORLG00015004425	-	100	95.330	Oryzias_latipes_hsok
ENSORLG00020007199	-	100	68.147	ENSOMEG00000016910	-	100	68.812	Oryzias_melastigma
ENSORLG00020007199	-	53	62.687	ENSOGAG00000009872	RRP1B	77	65.517	Otolemur_garnettii
ENSORLG00020007199	-	51	43.789	ENSOARG00000011314	RRP1B	53	59.649	Ovis_aries
ENSORLG00020007199	-	51	51.613	ENSPPAG00000035319	RRP1B	62	48.413	Pan_paniscus
ENSORLG00020007199	-	56	52.688	ENSPPRG00000010356	RRP1B	62	52.688	Panthera_pardus
ENSORLG00020007199	-	51	52.688	ENSPTIG00000016894	RRP1B	69	52.688	Panthera_tigris_altaica
ENSORLG00020007199	-	56	52.688	ENSPTRG00000013958	RRP1B	65	49.206	Pan_troglodytes
ENSORLG00020007199	-	56	48.413	ENSPANG00000011090	RRP1B	65	48.413	Papio_anubis
ENSORLG00020007199	-	57	57.447	ENSPKIG00000003422	-	64	56.250	Paramormyrops_kingsleyae
ENSORLG00020007199	-	55	53.022	ENSPSIG00000008152	RRP1B	60	52.342	Pelodiscus_sinensis
ENSORLG00020007199	-	53	49.462	ENSPEMG00000022490	Rrp1b	66	46.099	Peromyscus_maniculatus_bairdii
ENSORLG00020007199	-	71	49.855	ENSPCIG00000015513	RRP1B	66	53.333	Phascolarctos_cinereus
ENSORLG00020007199	-	62	68.548	ENSPFOG00000007424	-	69	67.925	Poecilia_formosa
ENSORLG00020007199	-	54	61.283	ENSPLAG00000016684	-	59	65.111	Poecilia_latipinna
ENSORLG00020007199	-	66	65.686	ENSPMEG00000007042	-	100	45.209	Poecilia_mexicana
ENSORLG00020007199	-	100	43.483	ENSPREG00000015673	-	100	43.630	Poecilia_reticulata
ENSORLG00020007199	-	56	51.613	ENSPPYG00000011470	RRP1B	65	48.413	Pongo_abelii
ENSORLG00020007199	-	56	53.763	ENSPCOG00000017927	RRP1B	70	47.945	Propithecus_coquereli
ENSORLG00020007199	-	55	53.763	ENSPVAG00000001436	RRP1B	60	52.688	Pteropus_vampyrus
ENSORLG00020007199	-	55	56.780	ENSPNAG00000007718	-	52	52.357	Pygocentrus_nattereri
ENSORLG00020007199	-	67	45.977	ENSRNOG00000001194	Rrp1b	69	44.780	Rattus_norvegicus
ENSORLG00020007199	-	56	51.613	ENSRBIG00000041689	RRP1B	64	46.875	Rhinopithecus_bieti
ENSORLG00020007199	-	56	51.613	ENSRROG00000031499	RRP1B	65	46.875	Rhinopithecus_roxellana
ENSORLG00020007199	-	51	50.538	ENSSBOG00000034727	RRP1B	59	50.538	Saimiri_boliviensis_boliviensis
ENSORLG00020007199	-	81	50.141	ENSSHAG00000017789	RRP1B	93	48.919	Sarcophilus_harrisii
ENSORLG00020007199	-	52	54.438	ENSSFOG00015003932	-	62	53.911	Scleropages_formosus
ENSORLG00020007199	-	55	68.421	ENSSMAG00000016847	-	92	61.323	Scophthalmus_maximus
ENSORLG00020007199	-	76	65.657	ENSSDUG00000000551	-	100	46.327	Seriola_dumerili
ENSORLG00020007199	-	57	47.472	ENSSPUG00000002834	RRP1B	69	46.348	Sphenodon_punctatus
ENSORLG00020007199	-	60	65.263	ENSSPAG00000005370	-	92	62.766	Stegastes_partitus
ENSORLG00020007199	-	57	53.571	ENSSSCG00000021698	RRP1B	68	53.571	Sus_scrofa
ENSORLG00020007199	-	54	50.152	ENSTGUG00000005926	RRP1B	65	49.235	Taeniopygia_guttata
ENSORLG00020007199	-	50	80.392	ENSTNIG00000005053	rrp1	66	80.392	Tetraodon_nigroviridis
ENSORLG00020007199	-	56	43.750	ENSTBEG00000000422	RRP1B	83	43.143	Tupaia_belangeri
ENSORLG00020007199	-	58	44.385	ENSTTRG00000000723	RRP1B	69	44.385	Tursiops_truncatus
ENSORLG00020007199	-	56	51.613	ENSUAMG00000026765	RRP1B	66	51.613	Ursus_americanus
ENSORLG00020007199	-	50	52.874	ENSUMAG00000025510	RRP1B	86	47.154	Ursus_maritimus
ENSORLG00020007199	-	51	46.032	ENSVVUG00000024509	RRP1B	64	46.032	Vulpes_vulpes
ENSORLG00020007199	-	50	61.538	ENSXETG00000013683	rrp1b	64	61.538	Xenopus_tropicalis
ENSORLG00020007199	-	66	63.221	ENSXMAG00000023123	-	69	63.614	Xiphophorus_maculatus