EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSORLG00020007333 (Gene tree)
Gene ID
-
Gene Symbol
puf60
Alias
-
Full Name
poly(U) binding splicing factor 60
Gene Type
protein_coding
Species
Oryzias_latipes_hni
Status
putative
Strand
Plus strand
Length
7103 bases
Position
chr20:19628586-19635688
Accession
101163935
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSORLP00020006467RRM_1PF00076.221.6e-4312
ENSORLP00020006467RRM_1PF00076.221.6e-4322
ENSORLP00020025410RRM_1PF00076.221.8e-4312
ENSORLP00020025410RRM_1PF00076.221.8e-4322
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSORLT00020004530-2506-ENSORLP00020006467513 (aa)-H2MA17
ENSORLT00020004498-2423-ENSORLP00020025410526 (aa)XP_023806014H2MA18
Gene Model
Click here to download ENSORLG00020007333's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020007333's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSORLG00020007333puf609982.136ENSORLG00020018144-9981.439
ENSORLG00020007333puf605637.255ENSORLG00020006941u2af2a6939.216
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSORLG00020007333puf6010084.837ENSG00000179950PUF6010085.221Homo_sapiens
ENSORLG00020007333puf6010097.076ENSAPOG00000001713puf60b10096.768Acanthochromis_polyacanthus
ENSORLG00020007333puf6010082.917ENSAMEG00000006406PUF609382.543Ailuropoda_melanoleuca
ENSORLG00020007333puf6010077.626ENSACIG00000003263-9977.864Amphilophus_citrinellus
ENSORLG00020007333puf6010097.076ENSACIG00000021705puf60b10097.076Amphilophus_citrinellus
ENSORLG00020007333puf6010083.658ENSAOCG00000015558-10083.491Amphiprion_ocellaris
ENSORLG00020007333puf6010097.076ENSAOCG00000005395puf60b10097.076Amphiprion_ocellaris
ENSORLG00020007333puf6010091.423ENSAPEG00000011923puf60b10090.114Amphiprion_percula
ENSORLG00020007333puf6010074.806ENSAPEG00000001836-9976.301Amphiprion_percula
ENSORLG00020007333puf6010082.979ENSATEG00000006303-10082.353Anabas_testudineus
ENSORLG00020007333puf6010097.466ENSATEG00000001730puf60b10096.768Anabas_testudineus
ENSORLG00020007333puf6010085.221ENSAPLG00000010150PUF6010085.389Anas_platyrhynchos
ENSORLG00020007333puf6010084.351ENSACAG00000001645PUF609784.659Anolis_carolinensis
ENSORLG00020007333puf6010084.645ENSANAG00000018626PUF6010085.029Aotus_nancymaae
ENSORLG00020007333puf6010097.076ENSACLG00000004462puf60b10097.076Astatotilapia_calliptera
ENSORLG00020007333puf6010086.476ENSAMXG00000036570puf60a10083.640Astyanax_mexicanus
ENSORLG00020007333puf6010081.214ENSAMXG00000041030puf60b10081.214Astyanax_mexicanus
ENSORLG00020007333puf6010085.221ENSBTAG00000037493PUF609985.009Bos_taurus
ENSORLG00020007333puf608150.667WBGene00004389rnp-68352.303Caenorhabditis_elegans
ENSORLG00020007333puf6010084.837ENSCJAG00000021485PUF609884.630Callithrix_jacchus
ENSORLG00020007333puf6010084.645ENSCAFG00000001400PUF609384.440Canis_familiaris
ENSORLG00020007333puf6010085.029ENSCAFG00020018754PUF609884.820Canis_lupus_dingo
ENSORLG00020007333puf6010085.221ENSCHIG00000001618PUF608785.009Capra_hircus
ENSORLG00020007333puf6010085.029ENSTSYG00000011912PUF6010085.413Carlito_syrichta
ENSORLG00020007333puf6010080.190ENSCPOG00000014613PUF609479.849Cavia_porcellus
ENSORLG00020007333puf6010084.837ENSCCAG00000007744PUF609884.820Cebus_capucinus
ENSORLG00020007333puf6010084.837ENSCATG00000035405PUF609884.630Cercocebus_atys
ENSORLG00020007333puf6010085.029ENSCLAG00000009154PUF609384.820Chinchilla_lanigera
ENSORLG00020007333puf6010084.837ENSCSAG00000008878PUF6010085.221Chlorocebus_sabaeus
ENSORLG00020007333puf6010085.029ENSCPBG00000005595PUF609984.774Chrysemys_picta_bellii
ENSORLG00020007333puf609947.744ENSCING00000008436-9947.180Ciona_intestinalis
ENSORLG00020007333puf606358.876ENSCING00000002156-8758.876Ciona_intestinalis
ENSORLG00020007333puf609748.200ENSCSAVG00000004765-9747.628Ciona_savignyi
ENSORLG00020007333puf609754.286ENSCSAVG00000001385-9954.155Ciona_savignyi
ENSORLG00020007333puf608184.123ENSCANG00000041843PUF6010084.597Colobus_angolensis_palliatus
ENSORLG00020007333puf6010085.221ENSCGRG00001017442Puf609385.009Cricetulus_griseus_chok1gshd
ENSORLG00020007333puf6010085.221ENSCGRG00000003717Puf609385.009Cricetulus_griseus_crigri
ENSORLG00020007333puf6010077.071ENSCSEG00000014845-9176.981Cynoglossus_semilaevis
ENSORLG00020007333puf6010097.271ENSCSEG00000019887puf60b9496.762Cynoglossus_semilaevis
ENSORLG00020007333puf6010097.466ENSCVAG00000009386puf60b10097.466Cyprinodon_variegatus
ENSORLG00020007333puf609181.838ENSCVAG00000001560-9881.838Cyprinodon_variegatus
ENSORLG00020007333puf6010087.048ENSDARG00000032175puf60a9991.925Danio_rerio
ENSORLG00020007333puf6010081.214ENSDARG00000001241puf60b9998.413Danio_rerio
ENSORLG00020007333puf609970.428ENSDNOG00000043278PUF609070.817Dasypus_novemcinctus
ENSORLG00020007333puf6010085.221ENSDORG00000004585Puf609585.009Dipodomys_ordii
ENSORLG00020007333puf609749.050FBgn0028577hfp9950.089Drosophila_melanogaster
ENSORLG00020007333puf609770.319ENSEBUG00000005470-8869.323Eptatretus_burgeri
ENSORLG00020007333puf6010059.291ENSEBUG00000014291puf60b8461.800Eptatretus_burgeri
ENSORLG00020007333puf6010085.029ENSEASG00005009695PUF609884.820Equus_asinus_asinus
ENSORLG00020007333puf6010085.029ENSECAG00000024681PUF609884.688Equus_caballus
ENSORLG00020007333puf6010087.786ENSELUG00000006507puf60b10084.919Esox_lucius
ENSORLG00020007333puf6010088.588ENSELUG00000018443-10087.925Esox_lucius
ENSORLG00020007333puf6010085.029ENSFCAG00000001045PUF6010085.413Felis_catus
ENSORLG00020007333puf6010076.392ENSFALG00000001136PUF609877.230Ficedula_albicollis
ENSORLG00020007333puf6010084.837ENSFDAG00000017177PUF609384.820Fukomys_damarensis
ENSORLG00020007333puf609682.688ENSFHEG00000021687PUF6010083.610Fundulus_heteroclitus
ENSORLG00020007333puf6010098.246ENSFHEG00000020046puf60b10098.246Fundulus_heteroclitus
ENSORLG00020007333puf6010082.819ENSGMOG00000006392puf60b10082.443Gadus_morhua
ENSORLG00020007333puf606688.921ENSGALG00000039901PUF609488.921Gallus_gallus
ENSORLG00020007333puf6010080.583ENSGAFG00000004334-9980.698Gambusia_affinis
ENSORLG00020007333puf6010098.635ENSGAFG00000021040puf60b10098.635Gambusia_affinis
ENSORLG00020007333puf6010072.568ENSGACG00000001484-10071.790Gasterosteus_aculeatus
ENSORLG00020007333puf6010083.821ENSGACG00000004717puf60b9883.815Gasterosteus_aculeatus
ENSORLG00020007333puf6010085.029ENSGAGG00000013289PUF609384.774Gopherus_agassizii
ENSORLG00020007333puf6010084.837ENSGGOG00000004646PUF609884.630Gorilla_gorilla
ENSORLG00020007333puf6010097.076ENSHBUG00000015118puf60b10097.076Haplochromis_burtoni
ENSORLG00020007333puf6010083.268ENSHBUG00000009634-10082.543Haplochromis_burtoni
ENSORLG00020007333puf6010084.837ENSHGLG00000006111PUF609384.820Heterocephalus_glaber_female
ENSORLG00020007333puf6010084.837ENSHGLG00100012362PUF609384.820Heterocephalus_glaber_male
ENSORLG00020007333puf6010092.669ENSHCOG00000015541puf60b10093.258Hippocampus_comes
ENSORLG00020007333puf609868.577ENSHCOG00000000378-9966.541Hippocampus_comes
ENSORLG00020007333puf6010085.413ENSIPUG00000002453puf60a9985.605Ictalurus_punctatus
ENSORLG00020007333puf6010082.576ENSIPUG00000004660puf60b9982.197Ictalurus_punctatus
ENSORLG00020007333puf6010085.029ENSSTOG00000025037PUF609484.820Ictidomys_tridecemlineatus
ENSORLG00020007333puf6010085.221ENSJJAG00000001076Puf609385.009Jaculus_jaculus
ENSORLG00020007333puf6010077.735ENSKMAG00000010106-10077.927Kryptolebias_marmoratus
ENSORLG00020007333puf6010097.856ENSKMAG00000016745puf60b10097.856Kryptolebias_marmoratus
ENSORLG00020007333puf6010092.982ENSLBEG00000012505puf60b10092.982Labrus_bergylta
ENSORLG00020007333puf607080.328ENSLACG00000005456PUF609980.328Latimeria_chalumnae
ENSORLG00020007333puf6010088.738ENSLOCG00000010106puf60b10088.258Lepisosteus_oculatus
ENSORLG00020007333puf6010083.877ENSLAFG00000022929PUF609483.871Loxodonta_africana
ENSORLG00020007333puf6010084.837ENSMFAG00000043373PUF609885.221Macaca_fascicularis
ENSORLG00020007333puf6010084.837ENSMMUG00000013558PUF609884.630Macaca_mulatta
ENSORLG00020007333puf6010084.837ENSMNEG00000031099PUF609884.630Macaca_nemestrina
ENSORLG00020007333puf6010084.837ENSMLEG00000040009PUF6010085.221Mandrillus_leucophaeus
ENSORLG00020007333puf6010083.495ENSMAMG00000019476-10083.144Mastacembelus_armatus
ENSORLG00020007333puf6010095.712ENSMAMG00000010394puf60b10093.169Mastacembelus_armatus
ENSORLG00020007333puf6010097.076ENSMZEG00005018515puf60b10097.076Maylandia_zebra
ENSORLG00020007333puf6010083.268ENSMZEG00005019425-10082.543Maylandia_zebra
ENSORLG00020007333puf6010085.221ENSMGAG00000013070PUF609589.244Meleagris_gallopavo
ENSORLG00020007333puf606989.444ENSMAUG00000014267-9088.525Mesocricetus_auratus
ENSORLG00020007333puf609667.659ENSMAUG00000018549-9568.400Mesocricetus_auratus
ENSORLG00020007333puf6010085.029ENSMICG00000012226PUF609984.877Microcebus_murinus
ENSORLG00020007333puf6010085.221ENSMOCG00000018780Puf609385.009Microtus_ochrogaster
ENSORLG00020007333puf6010073.010ENSMMOG00000018059-9976.606Mola_mola
ENSORLG00020007333puf6010097.271ENSMMOG00000004217puf60b10097.271Mola_mola
ENSORLG00020007333puf6010084.645ENSMODG00000009161PUF609484.440Monodelphis_domestica
ENSORLG00020007333puf6010082.101ENSMALG00000000200-10081.404Monopterus_albus
ENSORLG00020007333puf6010089.084ENSMALG00000006797puf60b10088.593Monopterus_albus
ENSORLG00020007333puf6010085.413MGP_CAROLIEiJ_G0019910Puf609385.389Mus_caroli
ENSORLG00020007333puf6010085.413ENSMUSG00000002524Puf609385.389Mus_musculus
ENSORLG00020007333puf6010085.413MGP_PahariEiJ_G0019920Puf609385.389Mus_pahari
ENSORLG00020007333puf6010085.413MGP_SPRETEiJ_G0020812Puf609385.389Mus_spretus
ENSORLG00020007333puf6010084.837ENSMPUG00000008137PUF609284.630Mustela_putorius_furo
ENSORLG00020007333puf6010084.453ENSMLUG00000000238-9384.250Myotis_lucifugus
ENSORLG00020007333puf6010078.887ENSMLUG00000013032-9878.748Myotis_lucifugus
ENSORLG00020007333puf6010085.221ENSNGAG00000000712Puf6010085.605Nannospalax_galili
ENSORLG00020007333puf608196.163ENSNBRG00000013047puf60b9796.163Neolamprologus_brichardi
ENSORLG00020007333puf6010083.658ENSNBRG00000017223-10082.922Neolamprologus_brichardi
ENSORLG00020007333puf6010084.837ENSNLEG00000002156PUF609884.630Nomascus_leucogenys
ENSORLG00020007333puf607293.502ENSOPRG00000002147PUF607293.502Ochotona_princeps
ENSORLG00020007333puf609863.095ENSODEG00000015513-9761.896Octodon_degus
ENSORLG00020007333puf607189.706ENSODEG00000014024-9088.728Octodon_degus
ENSORLG00020007333puf6010083.074ENSONIG00000014030-9982.163Oreochromis_niloticus
ENSORLG00020007333puf6010097.076ENSONIG00000006247puf60b9896.917Oreochromis_niloticus
ENSORLG00020007333puf609771.600ENSOANG00000006962PUF609871.146Ornithorhynchus_anatinus
ENSORLG00020007333puf60100100.000ENSORLG00000012279puf60b100100.000Oryzias_latipes
ENSORLG00020007333puf609981.503ENSORLG00000028655-9981.503Oryzias_latipes
ENSORLG00020007333puf6010099.621ENSORLG00015007718puf60b10099.621Oryzias_latipes_hsok
ENSORLG00020007333puf609982.136ENSORLG00015016833-9981.250Oryzias_latipes_hsok
ENSORLG00020007333puf609982.490ENSOMEG00000022185-9981.784Oryzias_melastigma
ENSORLG00020007333puf6010097.207ENSOMEG00000001643puf60b10097.207Oryzias_melastigma
ENSORLG00020007333puf6010085.029ENSOGAG00000006259PUF609384.820Otolemur_garnettii
ENSORLG00020007333puf6010083.398ENSOARG00000016235PUF609883.206Ovis_aries
ENSORLG00020007333puf6010084.837ENSPPAG00000029933PUF609983.865Pan_paniscus
ENSORLG00020007333puf6010085.029ENSPPRG00000003257PUF6010085.413Panthera_pardus
ENSORLG00020007333puf6010082.726ENSPTIG00000009795PUF609982.543Panthera_tigris_altaica
ENSORLG00020007333puf6010084.837ENSPTRG00000020670PUF609983.865Pan_troglodytes
ENSORLG00020007333puf6010084.837ENSPTRG00000043963-9884.630Pan_troglodytes
ENSORLG00020007333puf6010084.837ENSPANG00000021936PUF609884.630Papio_anubis
ENSORLG00020007333puf6010088.975ENSPKIG00000004295puf60a9991.343Paramormyrops_kingsleyae
ENSORLG00020007333puf6010090.253ENSPKIG00000012204puf60b10091.033Paramormyrops_kingsleyae
ENSORLG00020007333puf6010084.837ENSPSIG00000004679PUF609984.440Pelodiscus_sinensis
ENSORLG00020007333puf6010094.961ENSPMGG00000013444puf60b9994.961Periophthalmus_magnuspinnatus
ENSORLG00020007333puf6010085.221ENSPEMG00000008820Puf609385.009Peromyscus_maniculatus_bairdii
ENSORLG00020007333puf6010085.029ENSPCIG00000020270PUF609984.499Phascolarctos_cinereus
ENSORLG00020007333puf6010081.942ENSPFOG00000011118-10081.250Poecilia_formosa
ENSORLG00020007333puf6010098.441ENSPFOG00000019217puf60b9994.990Poecilia_formosa
ENSORLG00020007333puf6010098.441ENSPLAG00000010754puf60b10098.441Poecilia_latipinna
ENSORLG00020007333puf6010082.136ENSPLAG00000017025-9281.061Poecilia_latipinna
ENSORLG00020007333puf6010082.136ENSPMEG00000009767-9281.439Poecilia_mexicana
ENSORLG00020007333puf6010098.441ENSPMEG00000000838puf60b10098.441Poecilia_mexicana
ENSORLG00020007333puf6010095.825ENSPREG00000005440puf60b10095.556Poecilia_reticulata
ENSORLG00020007333puf608182.464ENSPPYG00000018951-9582.938Pongo_abelii
ENSORLG00020007333puf608184.123ENSPCAG00000014837PUF6010084.597Procavia_capensis
ENSORLG00020007333puf6010084.837ENSPCOG00000027981PUF609984.717Propithecus_coquereli
ENSORLG00020007333puf6010096.203ENSPVAG00000016167PUF608196.203Pteropus_vampyrus
ENSORLG00020007333puf6010083.268ENSPNYG00000004273-10082.543Pundamilia_nyererei
ENSORLG00020007333puf6010097.076ENSPNYG00000002556puf60b10097.076Pundamilia_nyererei
ENSORLG00020007333puf6010079.961ENSPNAG00000019415puf60b9178.967Pygocentrus_nattereri
ENSORLG00020007333puf6010084.720ENSPNAG00000019909puf60a9985.135Pygocentrus_nattereri
ENSORLG00020007333puf6010085.413ENSRNOG00000009960Puf609385.389Rattus_norvegicus
ENSORLG00020007333puf6010084.837ENSRBIG00000035274PUF609884.630Rhinopithecus_bieti
ENSORLG00020007333puf6010084.837ENSRROG00000029360PUF609984.630Rhinopithecus_roxellana
ENSORLG00020007333puf6010083.493ENSSBOG00000027089PUF609982.739Saimiri_boliviensis_boliviensis
ENSORLG00020007333puf609084.435ENSSHAG00000006668PUF609084.211Sarcophilus_harrisii
ENSORLG00020007333puf609589.613ENSSFOG00015019371puf60a9889.613Scleropages_formosus
ENSORLG00020007333puf6010082.659ENSSFOG00015019619puf60b9985.163Scleropages_formosus
ENSORLG00020007333puf607797.980ENSSMAG00000016381puf60b7897.980Scophthalmus_maximus
ENSORLG00020007333puf609783.735ENSSDUG00000007048-9784.180Seriola_dumerili
ENSORLG00020007333puf6010095.420ENSSDUG00000009935puf60b9995.420Seriola_dumerili
ENSORLG00020007333puf6010097.466ENSSLDG00000024011puf60b10094.877Seriola_lalandi_dorsalis
ENSORLG00020007333puf6010081.731ENSSLDG00000007366-9982.150Seriola_lalandi_dorsalis
ENSORLG00020007333puf606577.581ENSSPUG00000013518PUF609277.581Sphenodon_punctatus
ENSORLG00020007333puf6010083.527ENSSPAG00000020285-10084.109Stegastes_partitus
ENSORLG00020007333puf6010094.877ENSSPAG00000012144puf60b10094.877Stegastes_partitus
ENSORLG00020007333puf6010085.029ENSSSCG00000038800PUF609881.784Sus_scrofa
ENSORLG00020007333puf6010083.109ENSTGUG00000012797-10082.732Taeniopygia_guttata
ENSORLG00020007333puf6010097.466ENSTRUG00000005420puf60b10094.877Takifugu_rubripes
ENSORLG00020007333puf6010078.599ENSTRUG00000008843-10077.626Takifugu_rubripes
ENSORLG00020007333puf6010078.947ENSTNIG00000003069-9978.947Tetraodon_nigroviridis
ENSORLG00020007333puf6010097.466ENSTNIG00000013675puf60b9997.466Tetraodon_nigroviridis
ENSORLG00020007333puf607765.812ENSTBEG00000001899-10067.521Tupaia_belangeri
ENSORLG00020007333puf605585.567ENSTBEG00000002751-9785.567Tupaia_belangeri
ENSORLG00020007333puf6010083.685ENSTTRG00000017088PUF6010084.261Tursiops_truncatus
ENSORLG00020007333puf6010085.029ENSUAMG00000024917PUF609884.820Ursus_americanus
ENSORLG00020007333puf6010080.038ENSUMAG00000000272PUF609379.696Ursus_maritimus
ENSORLG00020007333puf6010085.029ENSVVUG00000022527PUF6010085.413Vulpes_vulpes
ENSORLG00020007333puf6010083.685ENSXETG00000012469puf609883.810Xenopus_tropicalis
ENSORLG00020007333puf6010095.127ENSXCOG00000012355puf60b10095.127Xiphophorus_couchianus
ENSORLG00020007333puf6010079.029ENSXMAG00000010507-9978.503Xiphophorus_maculatus
ENSORLG00020007333puf6010098.441ENSXMAG00000001862puf60b10098.441Xiphophorus_maculatus

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