EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020007339 (Gene tree)
Gene ID: -
Gene Symbol: sall4
Alias: -
Full Name: spalt-like transcription factor 4
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 5058 bases
Position: chr7:24484201-24489258
Accession: ZDB-GENE-060328-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020025402	zf-C2H2	PF00096.26	4.6e-30	1	6
ENSORLP00020025402	zf-C2H2	PF00096.26	4.6e-30	2	6
ENSORLP00020025402	zf-C2H2	PF00096.26	4.6e-30	3	6
ENSORLP00020025402	zf-C2H2	PF00096.26	4.6e-30	4	6
ENSORLP00020025402	zf-C2H2	PF00096.26	4.6e-30	5	6
ENSORLP00020025402	zf-C2H2	PF00096.26	4.6e-30	6	6
ENSORLP00020025402	zf-met	PF12874.7	1.4e-15	1	2
ENSORLP00020025402	zf-met	PF12874.7	1.4e-15	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020004519	-	3186	-	ENSORLP00020025402	1061 (aa)	-	-

Gene Model

Click here to download ENSORLG00020007339's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020007339's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020007339	sall4	56	55.102	ENSORLG00020010171	-	87	55.102
ENSORLG00020007339	sall4	54	57.143	ENSORLG00020009857	-	90	57.143
ENSORLG00020007339	sall4	54	44.898	ENSORLG00020008018	-	77	46.296
ENSORLG00020007339	sall4	95	65.385	ENSORLG00020020570	sall1a	91	65.385
ENSORLG00020007339	sall4	50	45.283	ENSORLG00020008484	-	81	45.283
ENSORLG00020007339	sall4	90	43.991	ENSORLG00020001794	sall3a	88	42.312
ENSORLG00020007339	sall4	54	51.020	ENSORLG00020009180	-	88	51.020
ENSORLG00020007339	sall4	52	53.061	ENSORLG00020001912	znf236	64	53.061
ENSORLG00020007339	sall4	58	53.061	ENSORLG00020010804	-	82	49.057

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020007339	sall4	100	43.662	ENSG00000101115	SALL4	91	67.308	Homo_sapiens
ENSORLG00020007339	sall4	100	77.737	ENSAPOG00000002465	sall4	100	77.093	Acanthochromis_polyacanthus
ENSORLG00020007339	sall4	100	44.336	ENSAMEG00000013250	-	99	45.565	Ailuropoda_melanoleuca
ENSORLG00020007339	sall4	100	75.161	ENSACIG00000017298	sall4	100	74.517	Amphilophus_citrinellus
ENSORLG00020007339	sall4	100	78.289	ENSAOCG00000023678	sall4	100	77.645	Amphiprion_ocellaris
ENSORLG00020007339	sall4	100	78.473	ENSAPEG00000000751	sall4	100	77.829	Amphiprion_percula
ENSORLG00020007339	sall4	100	77.982	ENSATEG00000024480	sall4	100	77.248	Anabas_testudineus
ENSORLG00020007339	sall4	99	50.133	ENSAPLG00000006498	SALL4	100	50.264	Anas_platyrhynchos
ENSORLG00020007339	sall4	100	49.956	ENSACAG00000012748	SALL4	100	50.395	Anolis_carolinensis
ENSORLG00020007339	sall4	100	44.115	ENSANAG00000023352	SALL4	100	44.028	Aotus_nancymaae
ENSORLG00020007339	sall4	100	75.277	ENSACLG00000017851	sall4	100	74.815	Astatotilapia_calliptera
ENSORLG00020007339	sall4	99	64.395	ENSAMXG00000001254	sall4	99	64.837	Astyanax_mexicanus
ENSORLG00020007339	sall4	100	43.243	ENSBTAG00000003101	SALL4	100	42.993	Bos_taurus
ENSORLG00020007339	sall4	80	46.215	ENSCJAG00000000591	SALL4	97	46.215	Callithrix_jacchus
ENSORLG00020007339	sall4	100	44.405	ENSCAFG00000011738	-	100	44.249	Canis_familiaris
ENSORLG00020007339	sall4	100	44.347	ENSCAFG00020021870	SALL4	100	44.249	Canis_lupus_dingo
ENSORLG00020007339	sall4	100	43.154	ENSCHIG00000026270	SALL4	100	42.906	Capra_hircus
ENSORLG00020007339	sall4	100	43.122	ENSTSYG00000007359	SALL4	100	51.667	Carlito_syrichta
ENSORLG00020007339	sall4	99	43.165	ENSCAPG00000012135	SALL4	98	43.381	Cavia_aperea
ENSORLG00020007339	sall4	100	40.388	ENSCCAG00000029512	-	100	60.784	Cebus_capucinus
ENSORLG00020007339	sall4	100	43.905	ENSCATG00000030757	SALL4	91	67.308	Cercocebus_atys
ENSORLG00020007339	sall4	100	44.007	ENSCLAG00000010479	SALL4	100	44.591	Chinchilla_lanigera
ENSORLG00020007339	sall4	100	43.816	ENSCSAG00000015269	SALL4	100	43.444	Chlorocebus_sabaeus
ENSORLG00020007339	sall4	99	49.823	ENSCPBG00000014995	SALL4	99	50.179	Chrysemys_picta_bellii
ENSORLG00020007339	sall4	100	43.761	ENSCANG00000036463	SALL4	100	43.558	Colobus_angolensis_palliatus
ENSORLG00020007339	sall4	100	42.021	ENSCGRG00001019569	Sall4	91	63.462	Cricetulus_griseus_chok1gshd
ENSORLG00020007339	sall4	100	41.197	ENSCGRG00000000462	Sall4	99	79.012	Cricetulus_griseus_crigri
ENSORLG00020007339	sall4	100	75.480	ENSCSEG00000014604	sall4	100	75.114	Cynoglossus_semilaevis
ENSORLG00020007339	sall4	100	76.987	ENSCVAG00000010815	sall4	100	76.987	Cyprinodon_variegatus
ENSORLG00020007339	sall4	99	63.628	ENSDARG00000044485	sall4	99	63.267	Danio_rerio
ENSORLG00020007339	sall4	100	44.308	ENSDNOG00000040633	SALL4	100	44.357	Dasypus_novemcinctus
ENSORLG00020007339	sall4	100	41.540	ENSDORG00000012841	Sall4	100	77.027	Dipodomys_ordii
ENSORLG00020007339	sall4	66	55.556	ENSETEG00000012475	-	58	55.556	Echinops_telfairi
ENSORLG00020007339	sall4	100	44.474	ENSECAG00000018533	SALL4	100	44.209	Equus_caballus
ENSORLG00020007339	sall4	100	43.722	ENSEEUG00000003649	SALL4	99	42.540	Erinaceus_europaeus
ENSORLG00020007339	sall4	100	64.393	ENSELUG00000005696	sall4	100	64.194	Esox_lucius
ENSORLG00020007339	sall4	100	44.182	ENSFCAG00000002822	SALL4	100	43.913	Felis_catus
ENSORLG00020007339	sall4	100	49.208	ENSFALG00000013149	SALL4	100	51.019	Ficedula_albicollis
ENSORLG00020007339	sall4	100	42.220	ENSFDAG00000017812	SALL4	100	42.668	Fukomys_damarensis
ENSORLG00020007339	sall4	100	75.691	ENSFHEG00000014187	sall4	100	75.691	Fundulus_heteroclitus
ENSORLG00020007339	sall4	100	68.836	ENSGMOG00000003822	sall4	100	69.322	Gadus_morhua
ENSORLG00020007339	sall4	100	50.928	ENSGALG00000041365	SALL4	100	51.416	Gallus_gallus
ENSORLG00020007339	sall4	100	76.824	ENSGAFG00000019925	sall4	100	76.824	Gambusia_affinis
ENSORLG00020007339	sall4	100	71.350	ENSGACG00000011124	sall4	100	70.894	Gasterosteus_aculeatus
ENSORLG00020007339	sall4	99	50.440	ENSGAGG00000002297	SALL4	99	50.352	Gopherus_agassizii
ENSORLG00020007339	sall4	100	43.635	ENSGGOG00000001832	SALL4	100	43.898	Gorilla_gorilla
ENSORLG00020007339	sall4	100	75.369	ENSHBUG00000007327	sall4	100	74.908	Haplochromis_burtoni
ENSORLG00020007339	sall4	98	43.825	ENSHGLG00000009043	SALL4	96	43.825	Heterocephalus_glaber_female
ENSORLG00020007339	sall4	98	43.825	ENSHGLG00100002722	SALL4	96	43.825	Heterocephalus_glaber_male
ENSORLG00020007339	sall4	100	73.186	ENSHCOG00000008519	sall4	100	72.635	Hippocampus_comes
ENSORLG00020007339	sall4	99	62.341	ENSIPUG00000019170	sall4	99	62.341	Ictalurus_punctatus
ENSORLG00020007339	sall4	62	54.146	ENSSTOG00000025002	SALL4	99	84.507	Ictidomys_tridecemlineatus
ENSORLG00020007339	sall4	100	43.345	ENSJJAG00000020688	Sall4	99	85.915	Jaculus_jaculus
ENSORLG00020007339	sall4	100	79.482	ENSKMAG00000002501	sall4	100	79.482	Kryptolebias_marmoratus
ENSORLG00020007339	sall4	100	74.725	ENSLBEG00000019951	sall4	100	73.901	Labrus_bergylta
ENSORLG00020007339	sall4	96	46.834	ENSLACG00000013898	SALL4	99	63.158	Latimeria_chalumnae
ENSORLG00020007339	sall4	100	62.022	ENSLOCG00000002427	sall4	100	62.262	Lepisosteus_oculatus
ENSORLG00020007339	sall4	100	44.435	ENSLAFG00000004309	SALL4	100	44.172	Loxodonta_africana
ENSORLG00020007339	sall4	100	43.937	ENSMFAG00000027169	SALL4	100	44.112	Macaca_fascicularis
ENSORLG00020007339	sall4	86	45.864	ENSMMUG00000003870	SALL4	91	67.308	Macaca_mulatta
ENSORLG00020007339	sall4	86	45.864	ENSMNEG00000035995	SALL4	91	67.308	Macaca_nemestrina
ENSORLG00020007339	sall4	100	44.025	ENSMLEG00000030467	SALL4	100	43.539	Mandrillus_leucophaeus
ENSORLG00020007339	sall4	100	76.567	ENSMAMG00000005223	sall4	100	76.022	Mastacembelus_armatus
ENSORLG00020007339	sall4	100	75.277	ENSMZEG00005023418	sall4	100	74.815	Maylandia_zebra
ENSORLG00020007339	sall4	74	63.462	ENSMGAG00000009344	SALL4	97	63.462	Meleagris_gallopavo
ENSORLG00020007339	sall4	100	42.557	ENSMAUG00000015814	Sall4	99	75.904	Mesocricetus_auratus
ENSORLG00020007339	sall4	100	43.246	ENSMICG00000000027	SALL4	100	43.421	Microcebus_murinus
ENSORLG00020007339	sall4	100	41.891	ENSMOCG00000018245	Sall4	99	83.562	Microtus_ochrogaster
ENSORLG00020007339	sall4	100	76.449	ENSMMOG00000014929	sall4	100	75.945	Mola_mola
ENSORLG00020007339	sall4	99	46.684	ENSMODG00000016387	SALL4	97	46.481	Monodelphis_domestica
ENSORLG00020007339	sall4	100	78.532	ENSMALG00000018709	sall4	100	78.551	Monopterus_albus
ENSORLG00020007339	sall4	100	41.891	MGP_CAROLIEiJ_G0024723	Sall4	99	86.111	Mus_caroli
ENSORLG00020007339	sall4	100	42.188	ENSMUSG00000027547	Sall4	99	86.111	Mus_musculus
ENSORLG00020007339	sall4	61	59.615	MGP_PahariEiJ_G0026164	Sall4	99	86.111	Mus_pahari
ENSORLG00020007339	sall4	100	42.101	MGP_SPRETEiJ_G0025643	Sall4	99	86.111	Mus_spretus
ENSORLG00020007339	sall4	100	44.229	ENSMPUG00000017543	SALL4	96	44.229	Mustela_putorius_furo
ENSORLG00020007339	sall4	98	43.462	ENSMLUG00000007060	-	99	43.462	Myotis_lucifugus
ENSORLG00020007339	sall4	99	34.077	ENSMLUG00000028073	-	99	33.719	Myotis_lucifugus
ENSORLG00020007339	sall4	100	41.667	ENSMLUG00000008405	-	100	41.985	Myotis_lucifugus
ENSORLG00020007339	sall4	100	42.456	ENSNGAG00000017833	Sall4	100	42.669	Nannospalax_galili
ENSORLG00020007339	sall4	100	75.185	ENSNBRG00000001829	sall4	100	75.185	Neolamprologus_brichardi
ENSORLG00020007339	sall4	100	43.284	ENSNLEG00000007013	SALL4	100	43.284	Nomascus_leucogenys
ENSORLG00020007339	sall4	84	63.462	ENSMEUG00000005793	-	99	63.462	Notamacropus_eugenii
ENSORLG00020007339	sall4	100	43.761	ENSOPRG00000011640	SALL4	100	43.954	Ochotona_princeps
ENSORLG00020007339	sall4	100	75.989	ENSONIG00000016557	sall4	100	76.081	Oreochromis_niloticus
ENSORLG00020007339	sall4	99	51.570	ENSOANG00000008667	SALL4	97	51.550	Ornithorhynchus_anatinus
ENSORLG00020007339	sall4	98	44.747	ENSOCUG00000011797	SALL4	99	44.663	Oryctolagus_cuniculus
ENSORLG00020007339	sall4	100	98.586	ENSORLG00000016130	sall4	100	98.586	Oryzias_latipes
ENSORLG00020007339	sall4	100	99.058	ENSORLG00015002265	sall4	100	99.058	Oryzias_latipes_hsok
ENSORLG00020007339	sall4	100	92.509	ENSOMEG00000017344	sall4	100	92.509	Oryzias_melastigma
ENSORLG00020007339	sall4	97	45.395	ENSOGAG00000013799	SALL4	99	44.856	Otolemur_garnettii
ENSORLG00020007339	sall4	100	41.440	ENSOARG00000014570	SALL4	100	41.528	Ovis_aries
ENSORLG00020007339	sall4	100	43.635	ENSPPAG00000038064	SALL4	100	43.898	Pan_paniscus
ENSORLG00020007339	sall4	100	43.429	ENSPPRG00000008677	SALL4	100	43.734	Panthera_pardus
ENSORLG00020007339	sall4	100	43.750	ENSPTRG00000013631	SALL4	100	43.810	Pan_troglodytes
ENSORLG00020007339	sall4	86	45.864	ENSPANG00000021792	SALL4	91	67.308	Papio_anubis
ENSORLG00020007339	sall4	100	61.810	ENSPKIG00000007074	sall4	100	62.160	Paramormyrops_kingsleyae
ENSORLG00020007339	sall4	99	50.303	ENSPSIG00000009066	SALL4	99	50.696	Pelodiscus_sinensis
ENSORLG00020007339	sall4	100	65.428	ENSPMGG00000022551	sall4	100	65.863	Periophthalmus_magnuspinnatus
ENSORLG00020007339	sall4	100	42.493	ENSPEMG00000022706	Sall4	99	86.111	Peromyscus_maniculatus_bairdii
ENSORLG00020007339	sall4	99	48.052	ENSPCIG00000022838	SALL4	97	48.010	Phascolarctos_cinereus
ENSORLG00020007339	sall4	100	76.547	ENSPFOG00000001442	sall4	100	76.547	Poecilia_formosa
ENSORLG00020007339	sall4	100	76.454	ENSPLAG00000008760	sall4	100	76.454	Poecilia_latipinna
ENSORLG00020007339	sall4	100	76.547	ENSPMEG00000008497	sall4	100	76.547	Poecilia_mexicana
ENSORLG00020007339	sall4	100	76.037	ENSPREG00000021140	sall4	100	76.037	Poecilia_reticulata
ENSORLG00020007339	sall4	100	43.684	ENSPPYG00000011138	SALL4	100	43.799	Pongo_abelii
ENSORLG00020007339	sall4	100	41.270	ENSPCAG00000004726	SALL4	99	41.274	Procavia_capensis
ENSORLG00020007339	sall4	100	43.198	ENSPCOG00000016321	SALL4	91	67.308	Propithecus_coquereli
ENSORLG00020007339	sall4	94	43.327	ENSPVAG00000002075	SALL4	94	43.045	Pteropus_vampyrus
ENSORLG00020007339	sall4	100	75.254	ENSPNYG00000021738	sall4	100	74.792	Pundamilia_nyererei
ENSORLG00020007339	sall4	99	65.000	ENSPNAG00000020929	sall4	99	65.182	Pygocentrus_nattereri
ENSORLG00020007339	sall4	100	42.894	ENSRNOG00000050035	Sall4	87	65.385	Rattus_norvegicus
ENSORLG00020007339	sall4	100	43.937	ENSRBIG00000039876	SALL4	100	43.734	Rhinopithecus_bieti
ENSORLG00020007339	sall4	100	43.937	ENSRROG00000036585	SALL4	100	43.734	Rhinopithecus_roxellana
ENSORLG00020007339	sall4	100	44.278	ENSSBOG00000030011	SALL4	100	43.717	Saimiri_boliviensis_boliviensis
ENSORLG00020007339	sall4	96	65.385	ENSSHAG00000018013	SALL4	90	65.385	Sarcophilus_harrisii
ENSORLG00020007339	sall4	100	62.091	ENSSFOG00015021075	sall4	100	61.594	Scleropages_formosus
ENSORLG00020007339	sall4	100	76.395	ENSSMAG00000019218	sall4	99	76.212	Scophthalmus_maximus
ENSORLG00020007339	sall4	100	79.853	ENSSDUG00000004657	sall4	100	79.487	Seriola_dumerili
ENSORLG00020007339	sall4	100	78.388	ENSSLDG00000004973	sall4	100	78.846	Seriola_lalandi_dorsalis
ENSORLG00020007339	sall4	100	78.565	ENSSPAG00000001978	sall4	100	78.289	Stegastes_partitus
ENSORLG00020007339	sall4	100	43.210	ENSSSCG00000007479	SALL4	100	43.108	Sus_scrofa
ENSORLG00020007339	sall4	100	75.023	ENSTRUG00000007410	sall4	100	74.288	Takifugu_rubripes
ENSORLG00020007339	sall4	100	73.166	ENSTNIG00000012460	sall4	100	72.761	Tetraodon_nigroviridis
ENSORLG00020007339	sall4	84	67.308	ENSTTRG00000007753	SALL4	88	67.308	Tursiops_truncatus
ENSORLG00020007339	sall4	100	43.520	ENSUAMG00000010113	SALL4	100	43.651	Ursus_americanus
ENSORLG00020007339	sall4	98	43.963	ENSUMAG00000024274	SALL4	98	43.963	Ursus_maritimus
ENSORLG00020007339	sall4	100	48.085	ENSXETG00000012326	sall4	100	48.085	Xenopus_tropicalis
ENSORLG00020007339	sall4	100	68.831	ENSXCOG00000015467	sall4	100	68.553	Xiphophorus_couchianus
ENSORLG00020007339	sall4	100	69.444	ENSXMAG00000012692	sall4	100	69.167	Xiphophorus_maculatus