EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00020007490 (Gene tree)
Gene ID: -
Gene Symbol: SNRPN
Alias: -
Full Name: small nuclear ribonucleoprotein-associated protein B'
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 5062 bases
Position: chr5:17888722-17893783
Accession: 101173217
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020025510	LSM	PF01423.22	7e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020004261	SNRPN-201	2634	-	ENSORLP00020025510	240 (aa)	XP_011473475	H2M018

Gene Model

Click here to download ENSORLG00020007490's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020007490's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020007490	SNRPN	70	93.491	ENSG00000128739	SNRPN	100	96.610	Homo_sapiens
ENSORLG00020007490	SNRPN	69	93.413	ENSAMEG00000007034	SNRPN	72	92.000	Ailuropoda_melanoleuca
ENSORLG00020007490	SNRPN	96	78.327	ENSANAG00000034241	SNRPN	73	93.182	Aotus_nancymaae
ENSORLG00020007490	SNRPN	75	90.710	ENSBTAG00000008251	SNRPN	78	90.173	Bos_taurus
ENSORLG00020007490	SNRPN	69	93.452	ENSCJAG00000003759	-	74	92.090	Callithrix_jacchus
ENSORLG00020007490	SNRPN	69	92.857	ENSCJAG00000042622	-	74	91.525	Callithrix_jacchus
ENSORLG00020007490	SNRPN	69	93.452	ENSCAFG00000010127	SNRPN	73	92.045	Canis_familiaris
ENSORLG00020007490	SNRPN	69	93.452	ENSCAFG00020024075	SNRPN	73	92.045	Canis_lupus_dingo
ENSORLG00020007490	SNRPN	75	90.710	ENSCHIG00000017477	SNRPN	79	90.608	Capra_hircus
ENSORLG00020007490	SNRPN	69	93.452	ENSTSYG00000005248	SNRPN	74	92.090	Carlito_syrichta
ENSORLG00020007490	SNRPN	69	93.452	ENSCAPG00000003047	SNRPN	74	92.090	Cavia_aperea
ENSORLG00020007490	SNRPN	69	93.452	ENSCPOG00000020270	SNRPN	74	92.090	Cavia_porcellus
ENSORLG00020007490	SNRPN	69	93.452	ENSCCAG00000024231	SNRPN	74	92.090	Cebus_capucinus
ENSORLG00020007490	SNRPN	69	93.452	ENSCATG00000032518	SNRPN	74	92.090	Cercocebus_atys
ENSORLG00020007490	SNRPN	69	93.452	ENSCLAG00000011376	SNRPN	74	92.090	Chinchilla_lanigera
ENSORLG00020007490	SNRPN	69	93.452	ENSCSAG00000006406	SNRPN	74	92.090	Chlorocebus_sabaeus
ENSORLG00020007490	SNRPN	67	93.210	ENSCHOG00000001846	SNRPN	64	91.813	Choloepus_hoffmanni
ENSORLG00020007490	SNRPN	69	93.452	ENSCANG00000041156	SNRPN	74	92.090	Colobus_angolensis_palliatus
ENSORLG00020007490	SNRPN	69	92.857	ENSCGRG00001004136	Snrpn	74	91.525	Cricetulus_griseus_chok1gshd
ENSORLG00020007490	SNRPN	69	93.452	ENSCGRG00000001621	Snrpn	74	92.090	Cricetulus_griseus_crigri
ENSORLG00020007490	SNRPN	100	98.340	ENSCVAG00000014193	SNRPN	100	98.340	Cyprinodon_variegatus
ENSORLG00020007490	SNRPN	69	92.814	ENSDNOG00000037060	SNRPN	72	92.045	Dasypus_novemcinctus
ENSORLG00020007490	SNRPN	69	93.452	ENSDORG00000004527	Snrpn	74	92.090	Dipodomys_ordii
ENSORLG00020007490	SNRPN	69	93.452	ENSEASG00005017871	SNRPN	73	92.045	Equus_asinus_asinus
ENSORLG00020007490	SNRPN	69	93.452	ENSECAG00000018148	SNRPN	73	92.045	Equus_caballus
ENSORLG00020007490	SNRPN	69	92.814	ENSEEUG00000007440	-	73	92.571	Erinaceus_europaeus
ENSORLG00020007490	SNRPN	69	93.452	ENSFCAG00000022298	-	74	92.045	Felis_catus
ENSORLG00020007490	SNRPN	69	93.452	ENSFDAG00000016578	-	74	92.090	Fukomys_damarensis
ENSORLG00020007490	SNRPN	75	82.222	ENSGMOG00000018161	SNRPN	79	82.022	Gadus_morhua
ENSORLG00020007490	SNRPN	69	93.452	ENSGGOG00000003988	SNRPN	74	92.090	Gorilla_gorilla
ENSORLG00020007490	SNRPN	58	79.856	ENSGGOG00000024469	-	76	70.000	Gorilla_gorilla
ENSORLG00020007490	SNRPN	86	81.159	ENSHGLG00000019812	-	73	90.286	Heterocephalus_glaber_female
ENSORLG00020007490	SNRPN	99	73.333	ENSHGLG00000002327	-	73	76.536	Heterocephalus_glaber_female
ENSORLG00020007490	SNRPN	69	93.452	ENSHGLG00000011924	SNRPN	74	92.090	Heterocephalus_glaber_female
ENSORLG00020007490	SNRPN	98	70.213	ENSHGLG00000020936	-	95	65.899	Heterocephalus_glaber_female
ENSORLG00020007490	SNRPN	99	74.895	ENSHGLG00100004881	-	73	78.090	Heterocephalus_glaber_male
ENSORLG00020007490	SNRPN	86	81.159	ENSHGLG00100021056	-	73	90.286	Heterocephalus_glaber_male
ENSORLG00020007490	SNRPN	69	93.452	ENSHGLG00100016559	SNRPN	74	92.090	Heterocephalus_glaber_male
ENSORLG00020007490	SNRPN	69	93.452	ENSSTOG00000001339	SNRPN	74	92.090	Ictidomys_tridecemlineatus
ENSORLG00020007490	SNRPN	69	93.413	ENSLAFG00000009458	SNRPN	73	92.045	Loxodonta_africana
ENSORLG00020007490	SNRPN	69	93.452	ENSMFAG00000042235	SNRPN	74	92.090	Macaca_fascicularis
ENSORLG00020007490	SNRPN	69	93.452	ENSMMUG00000023139	SNURF	74	92.090	Macaca_mulatta
ENSORLG00020007490	SNRPN	69	93.452	ENSMNEG00000031291	SNRPN	74	92.090	Macaca_nemestrina
ENSORLG00020007490	SNRPN	69	93.452	ENSMLEG00000038837	SNRPN	74	92.090	Mandrillus_leucophaeus
ENSORLG00020007490	SNRPN	69	89.222	ENSMGAG00000008696	SNRPN	73	86.932	Meleagris_gallopavo
ENSORLG00020007490	SNRPN	69	93.452	ENSMAUG00000000051	Snrpn	77	92.090	Mesocricetus_auratus
ENSORLG00020007490	SNRPN	69	93.452	ENSMICG00000042356	SNRPN	74	92.090	Microcebus_murinus
ENSORLG00020007490	SNRPN	69	93.452	ENSMOCG00000015350	Snrpn	74	92.090	Microtus_ochrogaster
ENSORLG00020007490	SNRPN	69	95.238	ENSMODG00000013926	-	74	93.785	Monodelphis_domestica
ENSORLG00020007490	SNRPN	69	93.452	MGP_CAROLIEiJ_G0029815	Snrpn	74	92.090	Mus_caroli
ENSORLG00020007490	SNRPN	69	93.452	ENSMUSG00000102252	Snrpn	74	92.090	Mus_musculus
ENSORLG00020007490	SNRPN	69	93.452	MGP_PahariEiJ_G0013040	Snrpn	74	92.090	Mus_pahari
ENSORLG00020007490	SNRPN	69	93.452	MGP_SPRETEiJ_G0030918	Snrpn	74	92.090	Mus_spretus
ENSORLG00020007490	SNRPN	95	48.908	ENSMPUG00000007115	-	81	59.777	Mustela_putorius_furo
ENSORLG00020007490	SNRPN	69	93.452	ENSMPUG00000014638	-	73	92.045	Mustela_putorius_furo
ENSORLG00020007490	SNRPN	69	93.413	ENSMLUG00000023361	-	72	92.000	Myotis_lucifugus
ENSORLG00020007490	SNRPN	59	68.310	ENSMLUG00000024428	-	64	66.906	Myotis_lucifugus
ENSORLG00020007490	SNRPN	66	59.748	ENSMLUG00000025849	-	58	66.667	Myotis_lucifugus
ENSORLG00020007490	SNRPN	69	93.452	ENSNGAG00000000181	Snrpn	74	92.090	Nannospalax_galili
ENSORLG00020007490	SNRPN	92	73.094	ENSNLEG00000001376	SNRPN	92	68.326	Nomascus_leucogenys
ENSORLG00020007490	SNRPN	69	93.452	ENSODEG00000013478	-	74	92.090	Octodon_degus
ENSORLG00020007490	SNRPN	96	74.569	ENSODEG00000016065	-	79	82.386	Octodon_degus
ENSORLG00020007490	SNRPN	69	92.857	ENSODEG00000019708	-	74	91.525	Octodon_degus
ENSORLG00020007490	SNRPN	69	92.857	ENSODEG00000020110	-	74	91.525	Octodon_degus
ENSORLG00020007490	SNRPN	88	87.037	ENSOCUG00000003532	-	73	92.090	Oryctolagus_cuniculus
ENSORLG00020007490	SNRPN	100	100.000	ENSORLG00015003332	SNRPN	100	100.000	Oryzias_latipes_hsok
ENSORLG00020007490	SNRPN	100	99.583	ENSOMEG00000002066	SNRPN	100	99.583	Oryzias_melastigma
ENSORLG00020007490	SNRPN	69	93.452	ENSOGAG00000007392	SNRPN	74	92.090	Otolemur_garnettii
ENSORLG00020007490	SNRPN	75	90.710	ENSOARG00000009080	SNRPN	75	90.608	Ovis_aries
ENSORLG00020007490	SNRPN	97	61.803	ENSPPAG00000034049	-	70	69.591	Pan_paniscus
ENSORLG00020007490	SNRPN	69	93.452	ENSPPAG00000027650	SNRPN	74	92.090	Pan_paniscus
ENSORLG00020007490	SNRPN	85	61.165	ENSPPRG00000006957	-	77	66.667	Panthera_pardus
ENSORLG00020007490	SNRPN	69	93.452	ENSPPRG00000019878	-	73	92.045	Panthera_pardus
ENSORLG00020007490	SNRPN	69	94.643	ENSPTIG00000004537	SNRPN	73	92.045	Panthera_tigris_altaica
ENSORLG00020007490	SNRPN	97	62.232	ENSPTRG00000052400	-	70	70.175	Pan_troglodytes
ENSORLG00020007490	SNRPN	69	93.452	ENSPTRG00000006826	SNRPN	74	92.090	Pan_troglodytes
ENSORLG00020007490	SNRPN	69	93.452	ENSPANG00000020142	SNRPN	74	92.090	Papio_anubis
ENSORLG00020007490	SNRPN	69	77.976	ENSPEMG00000013920	-	72	79.661	Peromyscus_maniculatus_bairdii
ENSORLG00020007490	SNRPN	69	91.071	ENSPEMG00000020979	-	74	89.831	Peromyscus_maniculatus_bairdii
ENSORLG00020007490	SNRPN	69	93.452	ENSPEMG00000012911	-	74	92.090	Peromyscus_maniculatus_bairdii
ENSORLG00020007490	SNRPN	69	92.814	ENSPCIG00000004699	-	56	92.045	Phascolarctos_cinereus
ENSORLG00020007490	SNRPN	100	99.167	ENSPMEG00000020674	SNRPN	100	99.167	Poecilia_mexicana
ENSORLG00020007490	SNRPN	69	93.452	ENSPPYG00000006269	SNURF	74	92.090	Pongo_abelii
ENSORLG00020007490	SNRPN	69	93.452	ENSPCOG00000014231	SNRPN	74	92.090	Propithecus_coquereli
ENSORLG00020007490	SNRPN	69	93.452	ENSRNOG00000059764	Snrpn	74	92.090	Rattus_norvegicus
ENSORLG00020007490	SNRPN	69	93.452	ENSRBIG00000041765	SNRPN	74	92.090	Rhinopithecus_bieti
ENSORLG00020007490	SNRPN	69	93.452	ENSRROG00000035157	SNRPN	74	92.090	Rhinopithecus_roxellana
ENSORLG00020007490	SNRPN	69	93.452	ENSSBOG00000000110	-	74	92.090	Saimiri_boliviensis_boliviensis
ENSORLG00020007490	SNRPN	73	92.614	ENSSBOG00000024929	-	73	91.477	Saimiri_boliviensis_boliviensis
ENSORLG00020007490	SNRPN	69	92.262	ENSSHAG00000010257	-	73	92.090	Sarcophilus_harrisii
ENSORLG00020007490	SNRPN	98	69.874	ENSSARG00000000072	SNRPN	99	69.874	Sorex_araneus
ENSORLG00020007490	SNRPN	69	93.452	ENSSSCG00000028124	SNRPN	76	92.045	Sus_scrofa
ENSORLG00020007490	SNRPN	75	90.710	ENSTTRG00000010966	SNRPN	67	90.608	Tursiops_truncatus
ENSORLG00020007490	SNRPN	67	93.210	ENSUAMG00000016284	SNRPN	59	91.765	Ursus_americanus
ENSORLG00020007490	SNRPN	69	93.452	ENSUMAG00000025589	SNRPN	73	92.045	Ursus_maritimus
ENSORLG00020007490	SNRPN	69	93.452	ENSVVUG00000017971	SNRPN	72	92.045	Vulpes_vulpes