EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00020007505 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein A0-like
Gene Type: protein_coding
Species: Oryzias_latipes_hni
Status: putative
Strand: Plus strand
Length: 2639 bases
Position: chr10:4457726-4460364
Accession: 101168026
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00020025519	RRM_1	PF00076.22	1.2e-32	1	2
ENSORLP00020025519	RRM_1	PF00076.22	1.2e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00020004228	-	903	XM_004086553	ENSORLP00020025519	300 (aa)	XP_004086601	-

Gene Model

Click here to download ENSORLG00020007505's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00020007505's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00020007505	-	67	31.548	ENSORLG00020013159	tardbpl	61	31.548
ENSORLG00020007505	-	56	36.111	ENSORLG00020012447	-	82	36.111
ENSORLG00020007505	-	93	60.839	ENSORLG00020022487	-	90	58.845
ENSORLG00020007505	-	98	97.270	ENSORLG00020008203	-	98	97.270
ENSORLG00020007505	-	70	95.652	ENSORLG00020007084	-	84	95.652
ENSORLG00020007505	-	55	37.681	ENSORLG00020004570	elavl3	60	37.681
ENSORLG00020007505	-	67	73.500	ENSORLG00020007148	hnrnpa0a	87	58.006
ENSORLG00020007505	-	59	36.158	ENSORLG00020021556	msi2a	57	36.158
ENSORLG00020007505	-	97	87.973	ENSORLG00020006029	-	93	87.973
ENSORLG00020007505	-	60	38.462	ENSORLG00020015195	dazap1	50	38.462
ENSORLG00020007505	-	84	69.652	ENSORLG00020022498	-	93	69.652
ENSORLG00020007505	-	61	58.382	ENSORLG00020007171	-	96	58.382
ENSORLG00020007505	-	55	42.667	ENSORLG00020014780	hnrnpd	51	39.080
ENSORLG00020007505	-	60	49.162	ENSORLG00020020788	hnrnpa3	94	40.379
ENSORLG00020007505	-	55	37.681	ENSORLG00020014277	elavl4	54	37.681
ENSORLG00020007505	-	58	38.636	ENSORLG00020007776	hnrnpabb	79	38.636
ENSORLG00020007505	-	93	31.338	ENSORLG00020008266	MSI1	61	35.567
ENSORLG00020007505	-	98	94.408	ENSORLG00020007109	-	99	94.408
ENSORLG00020007505	-	57	38.636	ENSORLG00020012133	hnrnpaba	53	34.211
ENSORLG00020007505	-	61	32.824	ENSORLG00020021206	tardbp	50	32.824
ENSORLG00020007505	-	58	51.724	ENSORLG00020006582	hnrnpa1a	83	51.724
ENSORLG00020007505	-	99	92.256	ENSORLG00020006043	-	97	92.256

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00020007505	-	58	62.428	ENSG00000177733	HNRNPA0	94	46.624	Homo_sapiens
ENSORLG00020007505	-	59	51.136	ENSAPOG00000003688	hnrnpa3	95	40.426	Acanthochromis_polyacanthus
ENSORLG00020007505	-	59	51.136	ENSAPOG00000014678	-	95	41.534	Acanthochromis_polyacanthus
ENSORLG00020007505	-	70	68.246	ENSAPOG00000003387	HNRNPA0	70	69.652	Acanthochromis_polyacanthus
ENSORLG00020007505	-	59	61.798	ENSAPOG00000003364	HNRNPA0	92	49.664	Acanthochromis_polyacanthus
ENSORLG00020007505	-	60	51.111	ENSAPOG00000003641	hnrnpa3	95	40.426	Acanthochromis_polyacanthus
ENSORLG00020007505	-	58	49.630	ENSAMEG00000004293	-	91	39.313	Ailuropoda_melanoleuca
ENSORLG00020007505	-	63	72.872	ENSACIG00000021834	HNRNPA0	89	70.792	Amphilophus_citrinellus
ENSORLG00020007505	-	60	50.838	ENSAOCG00000004095	hnrnpa3	88	43.810	Amphiprion_ocellaris
ENSORLG00020007505	-	60	50.838	ENSAPEG00000022522	hnrnpa3	88	43.810	Amphiprion_percula
ENSORLG00020007505	-	60	50.838	ENSATEG00000015304	hnrnpa3	94	43.810	Anabas_testudineus
ENSORLG00020007505	-	61	60.556	ENSATEG00000003526	-	95	60.556	Anabas_testudineus
ENSORLG00020007505	-	60	52.514	ENSACAG00000012234	-	91	42.073	Anolis_carolinensis
ENSORLG00020007505	-	58	62.069	ENSANAG00000017086	HNRNPA0	93	47.078	Aotus_nancymaae
ENSORLG00020007505	-	58	51.724	ENSANAG00000037918	-	92	42.249	Aotus_nancymaae
ENSORLG00020007505	-	60	50.838	ENSACLG00000008532	hnrnpa3	93	44.231	Astatotilapia_calliptera
ENSORLG00020007505	-	58	62.069	ENSBTAG00000016929	HNRNPA0	90	46.732	Bos_taurus
ENSORLG00020007505	-	71	53.991	ENSCJAG00000006112	HNRNPA0	94	46.906	Callithrix_jacchus
ENSORLG00020007505	-	58	50.000	ENSCJAG00000013830	-	91	42.154	Callithrix_jacchus
ENSORLG00020007505	-	58	62.069	ENSCAFG00000001132	HNRNPA0	94	47.557	Canis_familiaris
ENSORLG00020007505	-	58	62.069	ENSCAFG00020008142	HNRNPA0	94	47.557	Canis_lupus_dingo
ENSORLG00020007505	-	58	62.069	ENSCHIG00000002602	HNRNPA0	94	46.926	Capra_hircus
ENSORLG00020007505	-	58	47.674	ENSCAPG00000003643	-	88	39.879	Cavia_aperea
ENSORLG00020007505	-	58	62.286	ENSCPOG00000026092	HNRNPA0	94	47.712	Cavia_porcellus
ENSORLG00020007505	-	58	62.069	ENSCCAG00000010302	HNRNPA0	93	47.078	Cebus_capucinus
ENSORLG00020007505	-	58	44.253	ENSCATG00000038569	-	93	38.154	Cercocebus_atys
ENSORLG00020007505	-	58	62.428	ENSCATG00000021167	HNRNPA0	93	46.774	Cercocebus_atys
ENSORLG00020007505	-	58	62.069	ENSCLAG00000015132	HNRNPA0	94	46.179	Chinchilla_lanigera
ENSORLG00020007505	-	58	62.069	ENSCPBG00000008738	HNRNPA0	94	45.741	Chrysemys_picta_bellii
ENSORLG00020007505	-	58	50.000	ENSCANG00000017881	-	96	38.596	Colobus_angolensis_palliatus
ENSORLG00020007505	-	58	62.286	ENSCGRG00001005548	Hnrnpa0	93	46.078	Cricetulus_griseus_chok1gshd
ENSORLG00020007505	-	58	41.954	ENSCGRG00001010070	-	57	41.111	Cricetulus_griseus_chok1gshd
ENSORLG00020007505	-	58	48.276	ENSCGRG00000003686	-	61	48.276	Cricetulus_griseus_crigri
ENSORLG00020007505	-	58	41.954	ENSCGRG00000007592	-	56	41.111	Cricetulus_griseus_crigri
ENSORLG00020007505	-	60	49.162	ENSCVAG00000018995	hnrnpa3	91	43.312	Cyprinodon_variegatus
ENSORLG00020007505	-	60	51.397	ENSDARG00000059351	hnrnpa3	95	42.765	Danio_rerio
ENSORLG00020007505	-	58	62.069	ENSDNOG00000030903	HNRNPA0	93	47.557	Dasypus_novemcinctus
ENSORLG00020007505	-	58	51.149	ENSDNOG00000031964	-	85	40.667	Dasypus_novemcinctus
ENSORLG00020007505	-	58	43.103	ENSDORG00000023528	-	86	37.461	Dipodomys_ordii
ENSORLG00020007505	-	58	40.805	ENSETEG00000007747	-	94	35.690	Echinops_telfairi
ENSORLG00020007505	-	60	48.889	ENSEBUG00000009297	HNRNPA0	54	50.000	Eptatretus_burgeri
ENSORLG00020007505	-	58	62.069	ENSECAG00000032164	HNRNPA0	94	46.906	Equus_caballus
ENSORLG00020007505	-	60	50.000	ENSELUG00000023080	hnrnpa3	91	40.468	Esox_lucius
ENSORLG00020007505	-	58	62.069	ENSFCAG00000040261	HNRNPA0	94	47.883	Felis_catus
ENSORLG00020007505	-	59	61.714	ENSFALG00000014395	HNRNPA0	91	45.426	Ficedula_albicollis
ENSORLG00020007505	-	58	62.286	ENSFDAG00000019780	HNRNPA0	73	62.286	Fukomys_damarensis
ENSORLG00020007505	-	58	44.253	ENSFDAG00000014067	-	52	43.575	Fukomys_damarensis
ENSORLG00020007505	-	58	39.655	ENSFDAG00000018739	-	84	37.742	Fukomys_damarensis
ENSORLG00020007505	-	63	66.667	ENSFHEG00000008384	HNRNPA0	93	66.667	Fundulus_heteroclitus
ENSORLG00020007505	-	61	58.989	ENSFHEG00000008390	HNRNPA0	93	44.551	Fundulus_heteroclitus
ENSORLG00020007505	-	59	64.607	ENSGMOG00000016232	HNRNPA0	96	51.027	Gadus_morhua
ENSORLG00020007505	-	58	61.714	ENSGALG00000006160	HNRNPA0	95	48.333	Gallus_gallus
ENSORLG00020007505	-	60	50.838	ENSGACG00000004477	hnrnpa3	94	41.801	Gasterosteus_aculeatus
ENSORLG00020007505	-	58	62.069	ENSGAGG00000005632	HNRNPA0	94	46.057	Gopherus_agassizii
ENSORLG00020007505	-	63	72.872	ENSHBUG00000023868	HNRNPA0	74	73.016	Haplochromis_burtoni
ENSORLG00020007505	-	60	50.838	ENSHBUG00000019734	hnrnpa3	93	44.231	Haplochromis_burtoni
ENSORLG00020007505	-	58	62.286	ENSHGLG00000018216	HNRNPA0	94	46.753	Heterocephalus_glaber_female
ENSORLG00020007505	-	68	48.276	ENSHGLG00000014577	-	64	47.486	Heterocephalus_glaber_female
ENSORLG00020007505	-	58	49.425	ENSHGLG00100001336	-	93	40.606	Heterocephalus_glaber_male
ENSORLG00020007505	-	58	52.299	ENSHGLG00100006677	-	96	44.194	Heterocephalus_glaber_male
ENSORLG00020007505	-	61	70.414	ENSHCOG00000007174	HNRNPA0	91	70.414	Hippocampus_comes
ENSORLG00020007505	-	60	53.073	ENSIPUG00000019815	RO32	93	42.581	Ictalurus_punctatus
ENSORLG00020007505	-	58	39.080	ENSSTOG00000019374	-	95	34.969	Ictidomys_tridecemlineatus
ENSORLG00020007505	-	60	50.279	ENSKMAG00000015973	hnrnpa3	94	42.492	Kryptolebias_marmoratus
ENSORLG00020007505	-	60	49.721	ENSLBEG00000016767	hnrnpa3	93	42.395	Labrus_bergylta
ENSORLG00020007505	-	58	51.149	ENSLACG00000008189	hnrnpa3	93	39.157	Latimeria_chalumnae
ENSORLG00020007505	-	59	58.989	ENSLACG00000014480	HNRNPA0	65	57.754	Latimeria_chalumnae
ENSORLG00020007505	-	59	51.705	ENSLOCG00000006986	hnrnpa3	95	41.875	Lepisosteus_oculatus
ENSORLG00020007505	-	58	51.724	ENSLOCG00000006476	-	81	43.581	Lepisosteus_oculatus
ENSORLG00020007505	-	58	51.678	ENSLAFG00000027712	-	88	38.907	Loxodonta_africana
ENSORLG00020007505	-	58	43.353	ENSMNEG00000038943	-	67	43.103	Macaca_nemestrina
ENSORLG00020007505	-	58	62.428	ENSMLEG00000026629	HNRNPA0	93	46.926	Mandrillus_leucophaeus
ENSORLG00020007505	-	67	70.149	ENSMAMG00000017754	HNRNPA0	98	59.191	Mastacembelus_armatus
ENSORLG00020007505	-	60	50.838	ENSMZEG00005004663	hnrnpa3	93	44.231	Maylandia_zebra
ENSORLG00020007505	-	59	62.069	ENSMAUG00000018485	Hnrnpa0	94	46.823	Mesocricetus_auratus
ENSORLG00020007505	-	58	48.276	ENSMODG00000024570	-	90	40.741	Monodelphis_domestica
ENSORLG00020007505	-	59	57.225	ENSMODG00000002463	-	95	57.225	Monodelphis_domestica
ENSORLG00020007505	-	59	62.428	ENSMODG00000014720	HNRNPA0	74	62.069	Monodelphis_domestica
ENSORLG00020007505	-	60	50.279	ENSMALG00000009691	hnrnpa3	95	42.173	Monopterus_albus
ENSORLG00020007505	-	58	62.069	MGP_CAROLIEiJ_G0018593	Hnrnpa0	94	48.039	Mus_caroli
ENSORLG00020007505	-	58	62.069	ENSMUSG00000007836	Hnrnpa0	95	47.557	Mus_musculus
ENSORLG00020007505	-	58	62.069	MGP_PahariEiJ_G0019657	Hnrnpa0	94	47.097	Mus_pahari
ENSORLG00020007505	-	58	62.069	MGP_SPRETEiJ_G0019473	Hnrnpa0	94	48.693	Mus_spretus
ENSORLG00020007505	-	58	62.069	ENSMPUG00000019790	HNRNPA0	94	46.154	Mustela_putorius_furo
ENSORLG00020007505	-	58	62.069	ENSMLUG00000012683	-	93	46.753	Myotis_lucifugus
ENSORLG00020007505	-	58	60.345	ENSMLUG00000028644	-	94	44.762	Myotis_lucifugus
ENSORLG00020007505	-	58	62.069	ENSNGAG00000008883	Hnrnpa0	94	48.333	Nannospalax_galili
ENSORLG00020007505	-	58	51.724	ENSNLEG00000027151	-	93	42.683	Nomascus_leucogenys
ENSORLG00020007505	-	58	62.428	ENSNLEG00000008518	HNRNPA0	93	44.860	Nomascus_leucogenys
ENSORLG00020007505	-	58	62.069	ENSMEUG00000013675	HNRNPA0	93	45.860	Notamacropus_eugenii
ENSORLG00020007505	-	58	62.286	ENSODEG00000019566	HNRNPA0	94	47.249	Octodon_degus
ENSORLG00020007505	-	58	51.724	ENSODEG00000016578	-	85	42.662	Octodon_degus
ENSORLG00020007505	-	59	51.136	ENSONIG00000008607	hnrnpa3	90	44.231	Oreochromis_niloticus
ENSORLG00020007505	-	60	48.603	ENSORLG00000017561	hnrnpa3	94	40.063	Oryzias_latipes
ENSORLG00020007505	-	67	66.667	ENSORLG00000025015	-	68	66.667	Oryzias_latipes
ENSORLG00020007505	-	67	66.667	ENSORLG00000025332	-	68	66.667	Oryzias_latipes
ENSORLG00020007505	-	61	95.652	ENSORLG00000027074	-	81	95.652	Oryzias_latipes
ENSORLG00020007505	-	68	95.610	ENSORLG00015015182	-	89	95.610	Oryzias_latipes_hsok
ENSORLG00020007505	-	98	92.833	ENSORLG00015015185	-	97	92.833	Oryzias_latipes_hsok
ENSORLG00020007505	-	98	96.271	ENSORLG00015016169	HNRNPA0	99	96.271	Oryzias_latipes_hsok
ENSORLG00020007505	-	99	90.968	ENSORLG00015016507	-	96	90.968	Oryzias_latipes_hsok
ENSORLG00020007505	-	99	84.281	ENSORLG00015016236	HNRNPA0	96	85.906	Oryzias_latipes_hsok
ENSORLG00020007505	-	100	91.000	ENSORLG00015016157	-	100	90.667	Oryzias_latipes_hsok
ENSORLG00020007505	-	98	84.333	ENSORLG00015017144	-	97	76.972	Oryzias_latipes_hsok
ENSORLG00020007505	-	60	48.603	ENSORLG00015014774	hnrnpa3	91	40.063	Oryzias_latipes_hsok
ENSORLG00020007505	-	61	58.427	ENSORLG00015016302	HNRNPA0	92	45.484	Oryzias_latipes_hsok
ENSORLG00020007505	-	60	49.721	ENSOMEG00000004838	hnrnpa3	93	41.587	Oryzias_melastigma
ENSORLG00020007505	-	58	62.069	ENSOGAG00000025754	HNRNPA0	74	61.714	Otolemur_garnettii
ENSORLG00020007505	-	93	47.312	ENSOARG00000015434	HNRNPA0	92	47.826	Ovis_aries
ENSORLG00020007505	-	58	62.428	ENSPPAG00000005303	HNRNPA0	94	49.158	Pan_paniscus
ENSORLG00020007505	-	58	62.069	ENSPPRG00000014655	HNRNPA0	95	48.822	Panthera_pardus
ENSORLG00020007505	-	58	62.428	ENSPTRG00000017273	HNRNPA0	94	49.158	Pan_troglodytes
ENSORLG00020007505	-	58	62.428	ENSPANG00000012900	HNRNPA0	93	46.926	Papio_anubis
ENSORLG00020007505	-	60	52.113	ENSPKIG00000022916	hnrnpa3	67	51.397	Paramormyrops_kingsleyae
ENSORLG00020007505	-	60	65.000	ENSPKIG00000020270	HNRNPA0	94	53.846	Paramormyrops_kingsleyae
ENSORLG00020007505	-	60	64.444	ENSPKIG00000020281	-	83	52.303	Paramormyrops_kingsleyae
ENSORLG00020007505	-	60	49.721	ENSPMGG00000000747	hnrnpa3	94	49.007	Periophthalmus_magnuspinnatus
ENSORLG00020007505	-	58	62.069	ENSPEMG00000020274	Hnrnpa0	69	62.286	Peromyscus_maniculatus_bairdii
ENSORLG00020007505	-	58	50.289	ENSPMAG00000004449	-	77	49.718	Petromyzon_marinus
ENSORLG00020007505	-	60	49.721	ENSPFOG00000014049	hnrnpa3	94	42.173	Poecilia_formosa
ENSORLG00020007505	-	57	59.649	ENSPLAG00000015223	-	90	45.277	Poecilia_latipinna
ENSORLG00020007505	-	61	69.565	ENSPMEG00000017025	HNRNPA0	99	69.565	Poecilia_mexicana
ENSORLG00020007505	-	60	49.721	ENSPMEG00000006390	hnrnpa3	94	42.173	Poecilia_mexicana
ENSORLG00020007505	-	61	72.671	ENSPREG00000010619	HNRNPA0	76	72.671	Poecilia_reticulata
ENSORLG00020007505	-	60	49.721	ENSPREG00000005411	hnrnpa3	94	42.675	Poecilia_reticulata
ENSORLG00020007505	-	58	62.428	ENSPPYG00000015814	HNRNPA0	94	46.624	Pongo_abelii
ENSORLG00020007505	-	58	51.149	ENSPPYG00000001012	-	92	41.356	Pongo_abelii
ENSORLG00020007505	-	58	51.333	ENSPPYG00000012967	-	62	51.333	Pongo_abelii
ENSORLG00020007505	-	59	51.136	ENSPNYG00000008424	hnrnpa3	79	50.000	Pundamilia_nyererei
ENSORLG00020007505	-	60	63.128	ENSPNAG00000023333	HNRNPA0	94	53.497	Pygocentrus_nattereri
ENSORLG00020007505	-	58	62.069	ENSRNOG00000039876	LOC681410	95	47.078	Rattus_norvegicus
ENSORLG00020007505	-	57	49.669	ENSRROG00000034643	-	90	39.934	Rhinopithecus_roxellana
ENSORLG00020007505	-	58	52.874	ENSSFOG00015016280	hnrnpa1	92	42.947	Scleropages_formosus
ENSORLG00020007505	-	61	64.246	ENSSFOG00015002650	HNRNPA0	73	64.088	Scleropages_formosus
ENSORLG00020007505	-	60	51.955	ENSSFOG00015001814	hnrnpa3	96	41.486	Scleropages_formosus
ENSORLG00020007505	-	60	49.162	ENSSMAG00000015218	hnrnpa3	86	42.320	Scophthalmus_maximus
ENSORLG00020007505	-	60	50.279	ENSSDUG00000000381	hnrnpa3	94	43.492	Seriola_dumerili
ENSORLG00020007505	-	58	61.494	ENSSPUG00000016613	HNRNPA0	94	45.886	Sphenodon_punctatus
ENSORLG00020007505	-	59	51.136	ENSSPAG00000008969	hnrnpa3	94	43.279	Stegastes_partitus
ENSORLG00020007505	-	61	60.674	ENSSPAG00000001272	-	81	47.727	Stegastes_partitus
ENSORLG00020007505	-	58	39.429	ENSSSCG00000001098	-	91	36.858	Sus_scrofa
ENSORLG00020007505	-	59	59.551	ENSTRUG00000021494	-	95	48.173	Takifugu_rubripes
ENSORLG00020007505	-	60	49.721	ENSTRUG00000017504	hnrnpa3	93	41.935	Takifugu_rubripes
ENSORLG00020007505	-	60	50.279	ENSTNIG00000016958	hnrnpa3	95	41.026	Tetraodon_nigroviridis
ENSORLG00020007505	-	58	62.069	ENSTTRG00000000499	HNRNPA0	94	47.249	Tursiops_truncatus
ENSORLG00020007505	-	58	62.069	ENSVVUG00000014736	HNRNPA0	94	46.474	Vulpes_vulpes
ENSORLG00020007505	-	58	60.116	ENSXETG00000003833	hnrnpa0	57	59.322	Xenopus_tropicalis
ENSORLG00020007505	-	60	52.514	ENSXETG00000001806	hnrnpa3	51	52.514	Xenopus_tropicalis
ENSORLG00020007505	-	61	58.989	ENSXMAG00000029150	HNRNPA0	92	45.513	Xiphophorus_maculatus
ENSORLG00020007505	-	60	70.950	ENSXMAG00000019804	HNRNPA0	95	70.950	Xiphophorus_maculatus
ENSORLG00020007505	-	60	49.721	ENSXMAG00000000439	hnrnpa3	94	42.675	Xiphophorus_maculatus